Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088555.1_202016- 06-16] 4,025 sequences; 34,518,662 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2752 127 3e-24 >seq2752 Length=4442 Score = 127 bits (140), Expect = 3e-24 Identities = 295/436 (68%), Gaps = 9/436 (2%) Strand=Plus/Plus Query 70085 TACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC-TGCGAGACAGACTATTC 70143 ||||| ||||||||||| |||| ||| | || |||| ||| | |||||||| | Sbjct 3458 TACGGCTTCCAGTGGAGACACTTCGGCGCGGCATACAAAGACATGC-ACACAGACTACAC 3516 Query 70144 GGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCAATCCAACAGA 70203 || ||||| || || || || ||| | || | | || | || ||||||||||| Sbjct 3517 AGGGCAGGGCGTCGACCAGCTGAAGAATGTGATCCAGATGCTGAGAACGAATCCAACAGA 3576 Query 70204 TAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACC 70263 | | | || | ||| | ||||||||||||| || || ||||||| || || || Sbjct 3577 TCGTCGCATGCTCATGACTGCCTGGAATCCTGCAGCGCTGGACGAAATGGCGCTGCCGCC 3636 Query 70264 GTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCA---AATTGTCATGCTTAATGTA 70320 ||||||| ||| ||||| ||| | |||| | | |||| ||| | ||||| Sbjct 3637 TTGTCACTTGTTGTGCCAGTTCTACGTGAACGACCAGAAGGAGCTGTCGTGCATCATGTA 3696 Query 70321 TCAGAGG-AGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGT 70379 |||| || ||| ||| | |||||||| || ||||| ||||| || |||||| | | Sbjct 3697 TCAGCGGTCGTG-CGATGTCGGCCTCGGCGTCCCCTTCAACATCGCTTCCTATTCGCTTT 3755 Query 70380 TGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTG 70439 |||||| |||| |||| ||| | | ||| ||| | | |||||| | ||| ||| | Sbjct 3756 TGACGCTCATGGTTGCACACGTCTGCAACCTAAAACCTAAGGAGTTCATTCACTTCATGG 3815 Query 70440 GCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACT-CGAACGGGAG 70498 | || | || || || || || ||||| | ||||| | ||| || || | | || Sbjct 3816 GGAACACGCATGTCTACACGAACCATGTCGAGGCTTTAAAAGAGCAGCTGCGGA-GAGAA 3874 Query 70499 CCGAGACCTTTTCCCA 70514 |||||||| || |||| Sbjct 3875 CCGAGACCGTTCCCCA 3890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741021915459000