Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088555.1_202016- 06-16] 4,025 sequences; 34,518,662 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2350 466 2e-126 seq700 279 7e-70 seq1322 239 6e-58 seq233 237 2e-57 seq708 107 2e-18 seq389 102 1e-16 >seq2350 Length=5660 Score = 466 bits (516), Expect = 2e-126 Identities = 1103/1647 (67%), Gaps = 28/1647 (2%) Strand=Plus/Minus Query 6517 ATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTTTCATCTTC 6576 ||| || || || || | |||||| | || || | ||||| | || ||||||||| Sbjct 4978 ATAGCAATAATTCTCTAAACCATTTCTAGCTTCAATTCTTTTCTTATTCTCTTCATCTTC 4919 Query 6577 ATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCC 6636 |||| || ||||| ||||| | ||||| || || |||||| |||||||| || Sbjct 4918 TGCTTTGTATTTTTCAGCATCATTAACCATACGATCTATTTCTTCTGGTGATAATCTACC 4859 Query 6637 CTTATCATTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTTCAGCACTTA 6695 ||||||||| ||||| ||||| | ||| | |||||| | | || || |||| | | Sbjct 4858 CTTATCATTGGTAATAGTAATATGGTTCTG-TTTACCAGTTGATTTTTCCACAGCTGTGA 4800 Query 6696 CATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCG 6755 | || || |||||||||||||||| |||||| | || | |||||||||| || | Sbjct 4799 CGTTTAATATACCATTTGCATCAATATCGAATGTAACTTCAATTTGTGGTACTTTTCTTG 4740 Query 6756 GTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCC--TT 6813 |||| | ||||||||| ||||| |||| | || | ||| |||| ||| | | | Sbjct 4739 GTGCAGGTGGAATACCATCTAAATGAAATTTGCCTAACAAATTGTTGTCCTTTGTTAATG 4680 Query 6814 CTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGA 6873 || | ||| ||||| || || | |||| || | ||||||||||| || | Sbjct 4679 CT--CTTTCTCCTTCGTATACCTGAATTAATACACCTGGTTGATTATCAGCATAAGTGGT 4622 Query 6874 GAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAAT 6933 || ||||| ||| || | |||||| || ||||||||| ||| | | |||||||| Sbjct 4621 AAATATTTGACTTTTTTTTGCTGGAATTGTTGTATTTCTCTCAATCAACTTGGTCATAAC 4562 Query 6934 ACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTG 6993 |||||| |||||| | || | || | | || || || || | | ||||| Sbjct 4561 ACCACCTGCAGTTTCTAAACCTAAGGATAAGGAACATACATCTAACAGGAGTAAATCTTG 4502 Query 6994 AACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGA 7052 ||||| ||| | | | |||| | ||| ||||| |||||||| | || || || || | Sbjct 4501 AACAGCATTTGATTGAT-CACCTGATAAAATGGCTGCTTGGACAGCTGCACCATAAGCAA 4443 Query 7053 CCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACA 7112 | || ||||| || ||||| | | || ||| || || ||||| | ||| | || Sbjct 4442 CAGCTTCATCAGGATTAATTGATCTACAAGCTTCCTTTCCATTAAAGAATTCCTTAATCA 4383 Query 7113 TTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT--CACTTT 7170 | |||||||||||| |||| ||| || ||||| || || || | ||| | |||||| Sbjct 4382 ATGTTTGAATTTTCGGAATTCTTGTTGAACCACCAACTAACACAACTTCGTGTACACTTT 4323 Query 7171 CGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAA 7230 ||||| ||| ||| ||| | |||||| || || | | | |||||| Sbjct 4322 TC--TTATCCATCATTGCATCTTTCAAAACTTTTTCAACTGGAACTAATGTATCACGGAA 4265 Query 7231 CAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCC 7290 |||| ||||||| || ||||| | || | | ||| | | | |||||| || Sbjct 4264 ATAGTCAATACACAACTCTTCAAATCTAGCTCTGCTAACAGTTACACTATAATCAATACC 4205 Query 7291 GTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGC 7350 || | | || |||||||| || || | ||| | | ||||| ||||| || ||||| Sbjct 4204 TTCAAAAAGTGAGTCAATTTCTATAGTAGCTTGGGTAGATGAAGACAACGTACGTTTTGC 4145 Query 7351 GCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTT--C 7408 | |||||| |||| || | | | || | ||| || | |||||| | Sbjct 4144 TCTCTCACATTGGGTTCTCAATCTTCTCAATGCTCTACTGTTTTTTGATAAATCTTTTCC 4085 Query 7409 T-TATGTTTACGTTTAAACTCTTC---AGAGAAGTGTCGAAGGAGTCTCGAATCGAAATC 7464 | ||| ||| | ||||| ||||| | | |||| | | | ||| ||| ||||| Sbjct 4084 TCTATTTTTTCTCTTAAAATCTTCTACACAAAAGTTT---ACCAATCTGTTATCAAAATC 4028 Query 7465 TTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAAT 7524 ||| || || ||||| ||||| || || || || || |||||||| ||||| ||||||| Sbjct 4027 TTCTCCTCCTAAGTGAGTATCTCCTGCAGTTGCCTTTACTTCAAATATACCATCTTCAAT 3968 Query 7525 GTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC 7584 ||||||| || |||||||| |||||||| || | || ||||| | | || | || Sbjct 3967 AGTTAACAAAGATACATCAAAGGTACCACCTCCTAAATCGAAAATTAAAATATTTTTTTC 3908 Query 7585 GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644 | | | || |||| | ||| || || ||||| || || |||||||| |||||||| Sbjct 3907 TCCTTTTCCTTTTTTATGTAAACCATAAGCAATAGCTGCAGCAGTTGGTTCGTTAATAAT 3848 Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704 | | | |||| ||||| |||||| | ||||| || || ||||||| || ||||| Sbjct 3847 TCTCATAACATTCAATCCAGCGATAGTTCCAGCATCCTTTGTTGCTTGTCTCTGAGAATC 3788 Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764 ||||| || || ||||| || | || || | | | || || | | | | ||| Sbjct 3787 ATTAAAATAAGCAGGGACAGTAATAACAGCATTTTTAATAGATTTTCCTAAAAAGGCTTC 3728 Query 7765 CGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 || | |||||||| ||| |||| |||||| ||||| || ||||| | ||| || Sbjct 3727 AGCATTTTCTTTCATCTTTTGTAA-AACCATGGATGATATTTCTTCTGGGTGAAATAATT 3669 Query 7824 TCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCT 7883 | |||| || | || |||||||||||| ||||| || | || | | || Sbjct 3668 TTTTTTCTCCTTGGTAAGTAACTTCAATCATTGGTTTCTCTTCCAATCCTGATTTTACGG 3609 Query 7884 TATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC-TTCCGATA 7942 || | | ||||| |||||||| || || || | | || || |||| |||| || Sbjct 3608 TAAATGGCCAATGCTTCATATCACTCTGTAC-TGAAGATTCGGTAAATTTCCTTCCAATT 3550 Query 7943 AGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCG 8002 | | ||||||||||||||| ||||||| || || |||| ||| || || || || Sbjct 3549 AACCTCTTTGCATCAAAAACAGTGTTTTCAGGATTTCTGGCAACTTGATTTTTTGCAGCA 3490 Query 8003 TCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTC 8062 || || || | | || ||| | ||||| || |||||||||||||| |||| || Sbjct 3489 TCACCAATTAATCTCTCCGTAT---CGGTAAAAGCAACGTACGATGGGGTAGTTCTGTTA 3433 Query 8063 CCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATAC 8122 || ||||| || |||||||| ||||| || ||| ||| || || || || ||||| Sbjct 3432 CCCTGGTCATTTGCAATAATATCTACATTCTCATTTCTCCATACACCAACACAGGAATAG 3373 Query 8123 GTTGTTCCTAAATCAATACCGATTGCT 8149 || ||||| | |||||||| || ||| Sbjct 3372 GTCGTTCCAAGGTCAATACCAATGGCT 3346 >seq700 Length=13977 Score = 279 bits (308), Expect = 7e-70 Identities = 1105/1722 (64%), Gaps = 39/1722 (2%) Strand=Plus/Plus Query 104470 TGGTCTATATACACACCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCC 104529 ||||| || | |||| | ||| || |||||||||||||| | || || | |||||| Sbjct 3853 TGGTCAATGAAGGCACCCCGATCGGCAGCCATATCGATGATGTTCTTCTGCTTGATTTCC 3912 Query 104530 CATACGGTTTTATACAATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGAC 104589 || || || || || | |||||||| || ||||| || | || | || ||| Sbjct 3913 CAAACAGTCTTGTAGAGCTCCTTAAGGTCGCTAGGTATTTCGCTTATATACTGGACACTA 3972 Query 104590 CCATTTGCCTTCACCATAAGATCTT---TCATTTCCTTCGACCAGAGTCCACGTTCTTTC 104646 ||||| | | ||||| | || |||| || | |||||||||||| || Sbjct 3973 CCATTG---TGAGCAATAAGTTGTTGTTTCATGTCTTCATCCCAGAGTCCACGATCAAAT 4029 Query 104647 AAATCGTTTACTAAATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAA 104706 || || || | |||||| || || |||| ||||| || |||| || ||| | Sbjct 4030 AAGTCTTTAAGTAAATGAGGATTGACAACGAAGAATTCTCCACTGAGTACTCTTCTATAG 4089 Query 104707 TAGATATTGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGAT 104766 || |||||| | || |||||||| ||| | || ||||| ||||| ||||| || || ||| Sbjct 4090 TAAATATTGCTAGTGTACGGTTCAAAAGATTCATTGTTTCCTAATATCTGTGAAGTAGAT 4149 Query 104767 GCGGTAGGCATAGGTGCAAGAAGAA--GACTATTCATAGTTCCTTTCTTAACAAGTTTAC 104824 || |||||||||||||| | ||| | || | ||| || | | | | || | ||| | Sbjct 4150 GCAGTAGGCATAGGTGCTAAAAGTAATGAAT-TTCTTAATCCATGTTTTTTTATTTTTTC 4208 Query 104825 GCATGG--CATTCCAATCG---TATCGACCACTAAACTTTGGGTCTCGATCCCACATATC 104879 | || |||||| ||| | | || |||| || ||||||||| Sbjct 4209 TTTAAGTTCAGTCCAATTCCAATATTTATTATCAACCTTTAT------ATTCCACATATC 4262 Query 104880 GAATTGAAGAATACCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACAT 104939 |||||||||||||||| ||| || || | | | | |||||| || || || Sbjct 4263 AAATTGAAGAATACCTTGGCTAGCTGGACTACCTTCATAAGATTCATATTTCCCATAAAT 4322 Query 104940 TTCGGCAAGTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAAT 104999 || || | ||| ||| ||| | || || | || |||||||| || || | Sbjct 4323 TTGAGCTAATTCCATAGACATTTCTAATGCAGCATAATACATAGTTTCAAAAATTCTTTT 4382 Query 105000 GTTGAGTTTTCTCGATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGTCAGC 105059 || | || | | | ||| ||||| || | | |||||| | ||||| ||||| Sbjct 4383 ATTTAATTCTTTTGCTTCATCTGATTCGTAAGGATATCTTAAAAGCATAAATGTATCAGC 4442 Query 105060 GAGACCCTGAACACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTC 105119 | || || |||||||| || || ||||| || | | ||||| | || | | || Sbjct 4443 TAATCCTTGTACACCAATTCCTATTGGTCTATGTCTTCTGTTTGATCTTTCAGCTTCTTT 4502 Query 105120 GGTTGGGTAAAAGTTTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAAC 105179 || ||| | ||| | || |||| |||| ||| || | |||| ||||| |||| Sbjct 4503 AACAGGATAATAATTTCTTTCTATAATTTTGTCTAAATTTCTCGTAATAATTTTAGTAAT 4562 Query 105180 ACGATGTAACTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGC 105239 || ||| | || | |||||| || || || ||| || |||| ||| || Sbjct 4563 TTCATATAATTTTTTAAAATTAAACATTTTTTTTTCTGTATCTACAAATTTACATAAAGC 4622 Query 105240 GATTGATGCGAGATTACATACGGCGGTTTCTTCC--TTATCCGTAAACTCCAGAATTTCT 105297 || ||||| | ||||| || || ||| || | || ||| | || | ||||| Sbjct 4623 AATAGATGCTAAGTTACAAACAGCAACTTCATCTGGTGAT--GTATATTCGATTATTTCA 4680 Query 105298 GTACACAAATTTGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATTACAC 105357 ||| | ||| ||||||| || || | | ||| || || || || ||||||| Sbjct 4681 CAACATAGATTACTACATTTAATTGTCCCTAAATTTTTTTGATTAGATTTAGCATTACAT 4740 Query 105358 GCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTC 105417 | ||||| || | ||||||||| || ||||| |||| || | ||| || | Sbjct 4741 GAATCTTTATACAACATATATGGTACACCTGTTTCTATTTGACTTTGTAAAATAGCAAAC 4800 Query 105418 CAAATCTCCGAAGCTGGTACAACTTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAA 105477 || | || ||| |||| ||| || | | | ||| ||| ||||| || || Sbjct 4801 CATAAATCTTGCGCTAATACAGTTTTTTTTCCTAAATTTTCTTCTTCATATTTTTCATAT 4860 Query 105478 AGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC--TGATCAGGACAAA 105535 | | |||||| |||| ||| || || | | | | | | | | || ||||| | Sbjct 4861 AATTTTTCAAATTCTTCACCC--CATGTTTCACTTAAACCTGGACATTCATTTGGACACA 4918 Query 105536 ACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGG 105595 |||| |||||| || || ||| | |||||| ||||||||||| | ||| | | Sbjct 4919 TTAATGTCCAATTTTTATTTTCTTTAACTCTTTTCATAAACAAATCTGGTACCCAAACAG 4978 Query 105596 CTGAAAAGAGGTCTCGACACCTCGCC--TCTTCATCACCTTGATTCAAACGAATTTCGAG 105653 | |||| | |||| | |||| ||||| | ||| ||||| | | || || Sbjct 4979 CATAAAATAAATCTCTAG--CTCGTAATTCTTCTTTACCATGATTTTTTCTCAAATCTAG 5036 Query 105654 AAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGA-- 105711 ||| || | ||||| | ||||||||||| | ||| ||||||| || ||||| | Sbjct 5037 AAACTCAAATATATCTGAATGCCATGGTTCAATATATACTGCAAATGATCCTTTTCTTTT 5096 Query 105712 -CGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAA-TAA 105769 | || |||||| |||||||| || || |||| | |||| ||||||||| | ||| Sbjct 5097 TCCTCCACCTTGATCTACATATCTAGCTGTATCGTTAAAAACTCTTAACATTGGTACTAA 5156 Query 105770 TACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAA 105829 | || | ||| | ||||||||||| | |||| ||| || | | |||||| ||| || | Sbjct 5157 T-CCGTTTGATATACCATTTGTTCCTCTTATATATGAATTTTGTCCACGTATATCTTGTA 5215 Query 105830 CGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGT 105889 | || |||||||| || || ||||| || ||||| | |||| ||| || Sbjct 5216 CTGCTACACCAATACCACCTGCAGTTTTACTTATCAAAGCACATTGCTTTAATGTTTCAA 5275 Query 105890 AAATACCGTCGATACTATCTTCCTT-ATTCGCAATCAGGAAACACGATGACATTTGTGGT 105948 |||| || || || |||| | || || | | | | ||||| |||||||| |||||| Sbjct 5276 AAATTCCTTCAATCGAATCTGCTTTCATACATAGT-AAAAAACATGATGACATCTGTGGT 5334 Query 105949 CTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAAC 106008 || ||||| || | ||| || | |||||||||||||| | || | || || | | Sbjct 5335 CTTGGTGTCCCTGAATTAAATAATGTTGGTGTTGCATGTGTAAAATATTTTTGTGACATC 5394 Query 106009 GCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGC 106068 | |||||||| | | | || | ||| | | ||| |||||||| | || | | Sbjct 5395 AGATGATATGTTTCTAATGCTTTTTCTAGATCATCTAAATGTATACCAATTGATACTCTC 5454 Query 106069 ATATAGAGATATTGGGGTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTT 106128 || | || ||| ||| |||| ||||||| | | ||| | | ||| || Sbjct 5455 ATTATCAAATGTTGTGGTCTTTCTATAATTTTATTATTAATACGCAATAAATATGACCTT 5514 Query 106129 TCAAGTGTTTTTAAACCAAAATACCCAAACTCAAAATCACGT 106170 || | ||||| ||||||||||| || | | |||||||||| Sbjct 5515 TCTAACGTTTTAAAACCAAAATAATCATAATTAAAATCACGT 5556 >seq1322 Length=3124 Score = 239 bits (264), Expect = 6e-58 Identities = 562/837 (67%), Gaps = 16/837 (2%) Strand=Plus/Minus Query 115062 ATAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCAT 115121 ||||||| | || || |||||||||||||||||||| || | || || || ||||| Sbjct 2930 ATAATCAGCAACACGTTTTTCAAAAAAGTTTGTTTTTCCTTGTAGAGAAATTAAATCCAT 2871 Query 115122 AAAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCACTTG----TTTTGATA 115177 ||| ||| |||||||| | | | ||||| ||| | || | || ||| Sbjct 2870 CCAATTAAAAGGATTTTTTGCATAAAAAATTTT----TGAACAACCTAAACATTCCAATA 2815 Query 115178 ATCGATCCGCAACATATTCGATATACTCCGACATTTTACCGGAATTCATACCTATGAGAC 115237 ||||||| || ||| |||| ||||||| |||||| | |||||||| || || | | Sbjct 2814 ATCGATCTGCTACAAATTCTATATACTGAGACATTAATCTTGAATTCATCCCAATTAAAT 2755 Query 115238 TACACGGAAGTGCGTCCGTAATGAATTCTTTTTCGATTGAAACGGCGTCTCTTATAATTT 115297 ||| || || | || ||||| | |||| | | ||| || ||| | | ||| | Sbjct 2754 CACAAGGTAGAGATTCACATATGAAAGATCTTTCAACTTCAACAGCTTCTTTAACAATAT 2695 Query 115298 CTTCAATTGTATTTTGAGATGGTTTGTTTTTTAACATGTTGAATAATTCAACCGC-AAAT 115356 || || | || | | ||| |||| ||| | | ||| || ||| ||| Sbjct 2694 TTTTAACAACTTCTTCTGGTAATTTATTTTCTAATAAACTATATA-TTAAACAATTAAAA 2636 Query 115357 TCTTGGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACC-TGGAAG 115415 ||| || | |||||||||| ||| || ||||||||||||||| | || || || Sbjct 2635 TCTGTATGTAATCCTTCATCTCTACTAATTAGTTCATTACTAAAAGTAAGTCCATGTAAT 2576 Query 115416 TAACCCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTC 115475 | | || | ||||| ||||||||||| |||||||||||||| || | ||||||||| Sbjct 2575 TTATTCTGT-TTTTTAAACCAAAAAATTGCACAAAAACTACCACTAAATAGTATACCTTC 2517 Query 115476 AACACACGCAAAGGCTAATAAACGTTCAGCAAATGGTCGTTTCTTATCAAACCACTTCAT 115535 |||||| ||| |||| | | ||| ||||||| | | | || | ||| || Sbjct 2516 AACACATGCATTTGCTACAATTCTTTCTGCAAATGAATTTGTATCATTTATCCATTTTGC 2457 Query 115536 AGCCCATTTCGCCTTTCTTTCGATACACGGAATTGTTTGAATTGCTTCGAATAATTGTTT 115595 |||||| || || | | | || || ||| ||| || | ||||| | | Sbjct 2456 AGCCCAAAGTGCTTTATTCTTAACTGCTGGTATATTTTCAATAGCATGAAATAAATTTAA 2397 Query 115596 CTTTTCGCTAGAATTTTTTATATACTTGTCTATGAGTTTACTGTACGTTTCACCGTGTAC 115655 ||| || || ||||||||| || || || ||| |||||||||||| |||| Sbjct 2396 ACGTTCTTTATCATCTTTTATATAATTATCAATAAGTAAACTGTACGTTTCTGAATGTAT 2337 Query 115656 CATTTCATTGTGAGATT-GATAGGCATAAAATGATCGAGCCTCCGTAAGTTGTATTTCAT 115714 |||| | || ||| || | | |||||| | ||| || |||| ||| | ||| | Sbjct 2336 GTTTTC-TACTGCTATTTGAAATGAGTAAAATTTTTTAGCTTCTGTAATTTGAACTTC-T 2279 Query 115715 CTGCAAAA-TTATTATTTATATTTTCAAAAACTATACCATCAGAACCAGCaaaaaaaGCT 115773 || |||| ||| || | |||||| || |||||||||||| | | |||||||| ||| Sbjct 2278 CTTAAAAACTTACTAGCCAAATTTTCTAATACTATACCATCACTAGCTGCAAAAAATGCT 2219 Query 115774 AAAATATATTTTATAAAATGTTTTTCATTATCACTTAATTCATTCCAATCATCCATATCT 115833 |||| || ||| ||||||||||||||||| ||| |||||| | |||| | | ||| Sbjct 2218 AAAACATGTTTAATAAAATGTTTTTCATTTTCATTTAATTTTTCAAAATCTTTTAAATCA 2159 Query 115834 TTGGAAAAGTCTATCTCTTCAGCGGTCCAATTTGACATTTGGGCCTTTTTATACAAA 115890 | || || ||||| |||||||| |||||| ||| || || |||||||| ||| Sbjct 2158 CTTGATAAATCTATTTCTTCAGCTGTCCAAAATGATGCTTCTGCTTTTTTATAAAAA 2102 >seq233 Length=20094 Score = 237 bits (262), Expect = 2e-57 Identities = 415/600 (69%), Gaps = 17/600 (3%) Strand=Plus/Plus Query 6566 TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTC 6625 |||| |||||||||| | | ||||| ||||| | | ||| ||||| || | |||||| Sbjct 4415 TTTTTATCTTCATCTGCAAATTTTTCTGCATCGTTAATCATTTTTTCTATTTGTTCTTTT 4474 Query 6626 GATAATCTCCCCTTATCATTCGTAATCGTAAT--CTTTTCGGATTTACCCGAGGCCTTAT 6683 || | ||| || |||||||| ||||| ||||| |||| | ||| || | | |||| Sbjct 4475 GAAAGTCTACCTTTATCATTTGTAATGGTAATACCTTTACT--TTTTCCGGTTCCTTTAT 4532 Query 6684 CTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTG 6743 |||| || ||||| || ||||||||| ||||||| ||| |||| | |||| | Sbjct 4533 CTTCTGCTTCTACATGTAATATACCATTTTTATCAACAGTGAATGTTACTTCTATTTTGG 4592 Query 6744 GTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTAT 6803 || ||||||| |||| | ||| ||||| | || |||||| | || | ||| |||| Sbjct 4593 GTACACCCCTCTGTGCAGGTGGTATACCAGATAGTTCAAATTTTCCTAACAAATGATTAT 4652 Query 6804 CCGTCGCC--TTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATC 6861 || | | | || | |||||||||| | |||| ||| || || ||||||||||| Sbjct 4653 CCTTAGTTAATGCT--CTTTCACCTTCAAATACTTGTATTAATACAGCTGGTTGATTATC 4710 Query 6862 TTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAAC 6921 ||| || || || ||||| ||| || | |||||| |||||||| ||||| Sbjct 4711 TTGATAGGTAGAAAATGTTTGTGATTTTTTTGTTGGAATTACTGTATTTCTTTTAATAAG 4770 Query 6922 CGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAG 6981 | |||||||||||||| | ||||| | || || | | ||| || || || || | Sbjct 4771 TTGTGTCATAATACCACCAACTGTTTCTATACCTAGTGTTAAAGGAGTTACATCTAATAA 4830 Query 6982 TAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041 || | ||||| | |||| |||||| | || | ||||| | | || Sbjct 4831 TACAACATCTTGTA---ATTC------TTCACCTAAAATAATACCAGCTTGAATAGCAGC 4881 Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101 |||||||| || |||||||| |||||||| | |||| | ||||| ||||||||| | Sbjct 4882 ACCGTATGCTACTGCCTCATCAGGGTTAATTCCTCTATTGGGCTCTTTTCCGTTAAAAAA 4941 Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161 ||| || |||||||||||||| || || ||||| || ||||| || | || ||||| Sbjct 4942 ATCTTTTATTATTTGTTGAATTTTAGGTATACGTGTAGAACCACCAACAAGTACAATTTC 5001 Score = 122 bits (134), Expect = 1e-22 Identities = 223/327 (68%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| |||||||| ||||| || || |||| || || || || | |||||||| | || Sbjct 5296 ATCAAAATCTTCTCCACCTAAATGAGTATTACCAGCTGTTGCGTATACTTCAAATACTCC 5355 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 ||||| ||| | || |||||||| || ||||| || | ||| | | | || Sbjct 5356 ATTATCAATAACTAAAATAGATACATCAAATGTTCCACCTCCTAAATCATATACTAATAT 5415 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || || || | ||| ||| | |||||| || | ||| || || |||||||| Sbjct 5416 ACTTGTTTCTTCTTTTTT------ATCTAAACCGTATGCCAAAGCAGCAGCTGTTGGTTC 5469 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 ||||||||||| | | ||||| || ||||| || | || ||||| || ||||| | Sbjct 5470 GTTAATAATACGTACAATGTTCAAACCTGCAATGGTACCAGCGTCTTTTGTAGCTTGCCT 5529 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| | ||| ||||| ||||| || || || || || || | | || ||||| | Sbjct 5530 TTGTGCATCATTAAAATAGGCAGGTACTGTAACAACAGCATTTTTAACAGGTTTACCCAA 5589 Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782 | | |||| || || ||||||||||| Sbjct 5590 AAATGATTGAGCTATTTCTTTCATTTT 5616 >seq708 Length=34717 Score = 107 bits (118), Expect = 2e-18 Identities = 293/449 (65%), Gaps = 0/449 (0%) Strand=Plus/Minus Query 183109 AATATTGTGTTTAATATCTAACGGATTAAACGGTGGTATATATGAACTAAATCCGGTACC 183168 |||||||| | ||| |||| |||| | || ||| |||| | | || ||||| Sbjct 32229 AATATTGTCTATAACATCTCTATAATTATAATTAGGAATAAATGATGAATAACCTGTACC 32170 Query 183169 AATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAGTCAGGTTC 183228 ||||||||| |||||||| ||| | || |||| | || | |||||| | ||||| Sbjct 32169 TATACCTTCACATCCATTTATCAATATTGTAGGTATAACTGGGATATAATATTGTGGTTC 32110 Query 183229 GATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATCTTTGGGATCAAAAAG 183288 |||| || || || || | | ||| || |||| |||||||| | || ||| | Sbjct 32109 TATTTTTTGTCCTTCCTCATTTAAATATTTCAATATAGGATCATCATATTCATTAAATAT 32050 Query 183289 TATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGACTCGCGTCTTTACC 183348 |||| | ||| ||||||||||||||||| || | | | || ||||| || Sbjct 32049 ACTTCTTGTTGAGCTAGCTAATTTTGTAAATATATATCTCGCTGCAGAAGCATCTTTTCC 31990 Query 183349 ACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAATATTATTCGACCC 183408 ||| | | |||||||| |||||||| || | || |||||||| || || || Sbjct 31989 ACCTTCTTTTCTACTTCCAAATTGTCCACATGGCTCTAAAAAGTTAATATTGTTAGAACC 31930 Query 183409 CGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTCACCGTGGTGATA 183468 ||| | ||||| | || | |||||| | | | ||| ||| || || ||||| Sbjct 31929 TACAAATGTTTGTGCCATATTGATAATTGTTTGTTGTAGAGATGATTCTCCATGATGATA 31870 Query 183469 CGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTCAGATGTAAGATT 183528 | | | || | || ||| | ||||||| ||||| || |||| | | | ||| Sbjct 31869 TGCACTATGCTCAGCAATGTAACCAACTAATTGAGCAACTTTACATTCATTTTTTAAATT 31810 Query 183529 CTTTGTGAAACACGCGTATAACACTTTTC 183557 | ||||||| | ||||| ||||||| Sbjct 31809 TCGTTTGAAACATCCATATAAAACTTTTC 31781 >seq389 Length=30263 Score = 102 bits (112), Expect = 1e-16 Identities = 229/334 (69%), Gaps = 20/334 (6%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTG-TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATAC 7514 ||| |||||||| ||||| ||||| ||||| || || ||||| |||||||| | || Sbjct 6711 ATCAAAATCTTCTCCACC-AAGTGATGTATTACCATTTGTTGCTTTCACTTCAAAAACAC 6769 Query 7515 CTCCTTCAATGTTT--AACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAA-TG- 7570 ||||| ||| ||| || | || | |||||| ||||| || |||| ||| | | || Sbjct 6770 CTCCT--AATATTTCCAAAATAGATATATCAAATGTACCTCCTCCCAAATCATATACTGC 6827 Query 7571 -AGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | ||| || ||| |||| |||| ||| | | || | ||| || || || Sbjct 6828 AATTACTTTTCCATCA----CTTTTTTCTAATCCAAAG-----GCTAAAGCAGCTGCTGT 6878 Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 |||||| |||||||| | ||| | | || ||||| || | |||||||| || || Sbjct 6879 TGGTTCGTTAATAATTCTTAGAACATCTAATCCTGCAATTTTTCCTGCATCTTTTGTTGC 6938 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG-ACTTTCT 7748 ||||| || ||||||||||| || || || || || | || || | ||| ||||| Sbjct 6939 TTGTCTCTGTGAATCGTTAAAATATGCAGGAACAGTAATAACAGC-TTGGTGTACTTTTC 6997 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 | || | ||| ||| || | ||||||||||| Sbjct 6998 TTCCTAAATAGTTTTCAGCAGTTTCTTTCATTTT 7031 Score = 86.0 bits (94), Expect = 8e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 6708 CATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAA 6767 |||||||||| ||||| || | || | ||||||||| || || ||||||| ||||| Sbjct 5966 CATTTGCATCTACATCAAAGGTAACTTCAATTTGTGGGACTCCTCTAGGTGCGGGTGGAA 6025 Query 6768 TACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTT 6827 |||| || ||||| | ||| | | | || || | ||| | | | ||| || | Sbjct 6026 TACCAACTAGGTCAAACGAACCTAACATTTTATTGTCGCTAGCCATTTCTCTTTCTCCCT 6085 Query 6828 CATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTT 6887 ||| ||||| || | || | ||||||||| ||| |||||||| ||||| || Sbjct 6086 GATATACTTTGATACTAACTTGTGTTTGATTATCAGCTGCTGTTGAGAATATTTGAGATT 6145 Query 6888 TCTTAGATGGAATCGTCGTATTTCT 6912 | || | ||| || ||||||||||| Sbjct 6146 TTTTTGTTGGGATTGTCGTATTTCT 6170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635100844881000