Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088555.1_202016- 06-16] 4,025 sequences; 34,518,662 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq100 96.9 5e-15 >seq100 Length=37849 Score = 96.9 bits (106), Expect = 5e-15 Identities = 135/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 126920 TACTGGAAGAAGGATAAAGAGTAAAATTTTTATAGGTCCAACATACTATCATCGTCTTAA 126979 || |||||||| | ||||| ||||| ||||| ||||| || || ||||| | | || Sbjct 23552 TAATGGAAGAATGTTAAAGTCCAAAATATTTATTGGTCCTACTTATTATCAGAGATTAAA 23611 Query 126980 ACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGTCAAGTAAC-AACATTACATC 127038 ||||||||| ||||||| || |||||||||||| || | |||| | ||||| Sbjct 23612 ACATATGGTAGAAGATAAGATACATGCTAGAAGTAGAGGACCTTTAACTATGATTAC-GA 23670 Query 127039 GTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAAG 127098 | ||||||| ||| | || | || ||| || | ||||||| |||||||||| || Sbjct 23671 GACAACCAACAGAAGGTAGATCACGAGATGGAGGTCTCCGATTTGGTGAAATGGAAAGAG 23730 Query 127099 ATTGTAT 127105 | ||||| Sbjct 23731 ACTGTAT 23737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658370074089000