Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088555.1_202016- 06-16] 4,025 sequences; 34,518,662 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2350 652 0.0 seq233 365 3e-95 seq389 172 4e-37 seq700 127 2e-23 seq100 122 7e-22 >seq2350 Length=5660 Score = 652 bits (722), Expect = 0.0 Identities = 1160/1665 (70%), Gaps = 72/1665 (4%) Strand=Plus/Minus Query 281260 ATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTT----TTCTTGTTATCTGCTT 281315 |||||| ||||| ||||| ||| |||| ||||| |||| | |||| || Sbjct 4972 ATAATTCTCTAAACCATTTCTAGCTTCAATT----CTTTTCTTATTCTCTTCATCTTCTG 4917 Query 281316 CTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGC 281375 ||| ||| || ||| || ||| ||| | || |||| ||| || ||||| || Sbjct 4916 CTTTGTATTTTTCAGCATCATTAACCATACGATCTATTTCTTCTGGTGATAATCTACCCT 4857 Query 281376 GATTATTAGTAATAGTAATATTCTTGGATTTGTTT----GTTGATTTATCAGCGGCAGTC 281431 || ||| ||||||||||||| || | ||||| |||||||| || | || || Sbjct 4856 TATCATTGGTAATAGTAATAT----GGTTCTGTTTACCAGTTGATTTTTCCACAGCTGTG 4801 Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 || || | |||||||| ||||| | ||| ||||| ||||||||||| || || ||| Sbjct 4800 ACGTTTAATATACCATTTGCATCAATATCGAATGTAACTTCAATTTGTGGTACTTTTCTT 4741 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 | |||||||| || || || |||| |||| | || | ||| || || || || ||| Sbjct 4740 GGTGCAGGTGGAATACCATCTAAATGAAATTTGCCTAACAAATTGTTGTCCTTTGTTAAT 4681 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACA---GTTTGATTATCTGAATAAGTT 281608 || ||| || ||| | | || || ||| |||| | ||||||||| | |||||| Sbjct 4680 GCTCTTTCTCCTTCGTATACCTGAAT--TAA-TACACCTGGTTGATTATCAGCATAAGTG 4624 Query 281609 GTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATA 281668 ||||||| | |||||| ||||||||||| ||||| ||||| | ||||||||| Sbjct 4623 GTAAATATTTGACTTTTTTTTGCTGGAATTGTTGTATTTCTCTCAATCAACTTGGTCATA 4564 Query 281669 ATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTT 281728 | |||||| || ||||||||||| | || | | | ||||| | |||| | || | Sbjct 4563 ACACCACCTGCAGTTTCTAAACCTAAGGATAAGGAACATACATCTAACAGGAGTAAATCT 4504 Query 281729 TGAAGTTTTTCATCAGTTTGACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATAT 281785 |||| ||| | |||| || | | ||| |||||||| | ||| |||||||| Sbjct 4503 TGAACAG---CATTTGATTGATCACCTGATAAAATGGCTGCTTGGACAGCTGCACCATAA 4447 Query 281786 GCAACAGCTTCATCAGGATTAACAGTTTCATTTAG----TTTTTTACCATTGAAAAAATT 281841 |||||||||||||||||||||| || || || || || ||||| ||| |||| Sbjct 4446 GCAACAGCTTCATCAGGATTAA----TTGATCTACAAGCTTCCTTTCCATT-AAAGAATT 4392 Query 281842 --TGAAAGAAGTTGTCTTACCTTA-GGAATACGAGATGATCCTCCAACTAATACAATTTC 281898 | || || ||| | | || ||||| | | ||| || |||||||| |||| ||| Sbjct 4391 CCTTAATCAA--TGTTTGAATTTTCGGAATTCTTGTTGAACCACCAACTAACACAACTTC 4334 Query 281899 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 281958 || || | ||||||| ||| ||| |||||||||||||| || | | Sbjct 4333 GTGTACACTTTTCTTATCCATCATTGCATCTTTCAAAACTTTTTCAACTGGAACTAATGT 4274 Query 281959 AGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 282018 | | | || |||| ||| | ||||| ||| ||||||| ||| ||| ||| |||| Sbjct 4273 ATCACGGAAATAGTCAATACACAACTCTTCAAATCTAGCTCTGCTAACAGTTACACTATA 4214 Query 282019 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 282078 |||||| ||||| || | || |||| ||| || |||| ||| || || ||||| | | Sbjct 4213 ATCAATACCTTCAAAAAGTGAGTCAATTTCTATAGTAGCTTGGGTAGATGAAGACAACGT 4154 Query 282079 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT--TGCTGATTGATTC 282136 |||||| || | |||||| || || | ||||| || ||| | || | ||||| Sbjct 4153 ACGTTTTGCTCTCTCACATTGGGTTCTCAATCTTCTCAATGCTCTACTGTTTTTTGAT-- 4096 Query 282137 AAATCTGTTT---TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTA 282193 |||||| || ||| ||||||||| |||||||| ||||| | |||| | | ||| Sbjct 4095 AAATCTTTTCCTCTATTTTTTCTCTTAAAATCTTCTACACAAAAGTTTACCAATCTGTTA 4036 Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 ||||||||||| ||||| || | ||||| ||||| || || |||||| || | ||| Sbjct 4035 TCAAAATCTTCTCCTCCTAAGTGAGTATCTCCTGCAGTTGCCTTTACTTCAAATATACCA 3976 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 ||||||| || || | || |||||| ||| ||||| || | ||| ||||| | | | Sbjct 3975 TCTTCAATAGTTAACAAAGATACATCAAAGGTACCACCTCCTAAATCGAAAATTAAAATA 3916 Query 282314 TTCATTTCT--TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 || ||||| || || | ||||||| | |||||| |||| ||| ||||||||||||| Sbjct 3915 TTTTTTTCTCCTTTTCCT--TTTTTATGTAAACCATAAGCAATAGCTGCAGCAGTTGGTT 3858 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431 | ||||||||||||| |||||| | ||||| || |||| ||||| || || ||||||| Sbjct 3857 CGTTAATAATTCTCATAACATTCAATCCAGCGATAGTTCCAGCATCCTTTGTTGCTTGTC 3798 Query 282432 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAA 282491 | || ||||| |||||||| ||||| ||||||||||| |||| | | | |||||| Sbjct 3797 TCTGAGAATCATTAAAATAAGCAGGGACAGTAATAACAGCATTTTTAATAGATTTTCC-- 3740 Query 282492 TATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 282549 || || |||| || ||| |||||| || ||||| ||| ||||| |||| |||||| Sbjct 3739 TAAAAAGGCTTCAGCATTTTCTTTCATCTTTTGTAAAACCATGGATGATATTTCTTCTGG 3680 Query 282550 AGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTAT-TACCAA-CA 282607 | || || ||| ||| || | ||||||| |||||| | | |||| | Sbjct 3679 GTGAAATAATTTTTTTTCTCCTTGGTAAGTAACTTCAATCATTGGTTTCTCTTCCAATCC 3620 Query 282608 TTA-ATAACTTTAAATGGCCAATATTTCATA----TCTG-ATTGAACACTTTGGTCATTA 282661 | | | || |||||||||||| |||||| |||| | |||| | || || || Sbjct 3619 TGATTTTACGGTAAATGGCCAATGCTTCATATCACTCTGTACTGAAGA-TTCGG----TA 3565 Query 282662 AAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCT 282721 || | || |||||||| | ||||||||||||| ||| || ||||| ||| || Sbjct 3564 AATTTCCTTCCAATTAACCTCTTTGCATCAAAAACAGTGTTTTCAGGATTTCTGGCAACT 3505 Query 282722 TGATATTTGGCTGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGG 282780 |||| ||| || ||||| ||||| | || | || || || ||||| | ||| || ||||| Sbjct 3504 TGATTTTTTGCAGCATCACCAATTA-ATCTCTCCGTATCGGTAAAAGCAACGTACGATGG 3446 Query 282781 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 282840 || || | ||||| || ||||| |||||||| || || || ||||| ||||||||| Sbjct 3445 GGTAGTTCTGTTACCCTGGTCATTTGCAATAATATCTACATTCTCATTTCTCCATACACC 3386 Query 282841 TACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCAATTTT 282885 ||||| | | || ||||| | ||||||||||| || || || Sbjct 3385 AACACAGGAATAGGTCGTTCCAAGGTCAATACCAATGGCTATATT 3341 Score = 131 bits (144), Expect = 1e-24 Identities = 216/311 (69%), Gaps = 13/311 (4%) Strand=Plus/Minus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCAATGTTCTAAATACTCCA 86019 ||||||||||||||||| || || |||| || | |||| | | ||||| ||| Sbjct 4035 TCAAAATCTTCTCCTCCTAAGTGAGTATCTCCTGCAGTTGCCTTTACTTCAAATATACCA 3976 Query 86020 TTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTACG 86079 | | ||| | | || || ||||| || || ||| ||||||| || ||| ||| Sbjct 3975 TCTTCAATAGTTAACAAAGATACATCAAAGGTACCACCTCCTAAATCGAAAA---TTAAA 3919 Query 86080 TTACCACCAGtttttttATTCCATTT--TTCACTTCCTAAACCGTATGCAAGAGCTGCTG 86137 || |||||| ||| ||| || | |||||| || |||| |||||| | Sbjct 3918 ATA--------TTTTTTTCTCCTTTTCCTTTTTTATGTAAACCATAAGCAATAGCTGCAG 3867 Query 86138 CAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAG 86197 |||||||||| ||||| ||| | | ||||| || || || || | ||| ||| | Sbjct 3866 CAGTTGGTTCGTTAATAATTCTCATAACATTCAATCCAGCGATAGTTCCAGCATCCTTTG 3807 Query 86198 TTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATAG 86257 ||||||||||||| | ||||||||||| || || ||||||||||| || || ||||||| Sbjct 3806 TTGCTTGTCTCTGAGAATCATTAAAATAAGCAGGGACAGTAATAACAGCATTTTTAATAG 3747 Query 86258 GTTTTTGTAAA 86268 |||| |||| Sbjct 3746 ATTTTCCTAAA 3736 >seq233 Length=20094 Score = 365 bits (404), Expect = 3e-95 Identities = 1071/1632 (66%), Gaps = 45/1632 (3%) Strand=Plus/Plus Query 281260 ATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTC 281319 |||||| ||||| | |||||||| || || || | || |||||| | ||| | Sbjct 4372 ATAATTGTCTAAATTATTTTTAGCTTCTACTTTTTCTCTCAAATTTTTATCTTCATCTGC 4431 Query 281320 AAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT 281379 ||||| || || || |||||||| | || ||||| |||| || | ||| || || Sbjct 4432 AAATTTTTCTGCATCGTTAATCATTTTTTCTATTTGTTCTTTTGAAAGTCTACCTTTATC 4491 Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| |||||| || ||| ||| |||||| | || |||| | Sbjct 4492 ATTTGTAATGGTAATACCTTTACTTTTTCCGGTTCCTTTATCTTCTGCTTCTACATGTAA 4551 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 |||||||| ||| | | ||||| ||||| |||| || || || ||||| ||||| Sbjct 4552 TATACCATTTTTATCAACAGTGAATGTTACTTCTATTTTGGGTACACCCCTCTGTGCAGG 4611 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||| || || | | |||| |||| | || |||||| ||||| ||| || ||| Sbjct 4612 TGGTATACCAGATAGTTCAAATTTTCCTAACAAATGATTATCCTTAGTTAATGCTCTTTC 4671 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAATAAGTTGTAAATAC 281616 ||| || || | ||| || ||| ||||| | ||||||||| ||| || | |||| Sbjct 4672 ACCTTCAAATACTTGTAT--TAA-TACAGCTGGTTGATTATCTTGATAGGTAGAAAATGT 4728 Query 281617 TCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 | |||||||| |||||| ||| ||||| | ||||| | |||||||||||||| Sbjct 4729 TTGTGATTTTTTTGTTGGAATTACTGTATTTCTTTTAATAAGTTGTGTCATAATACCACC 4788 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 | ||||||||| ||| || | | |||||| ||||| | || |||| || ||| | || Sbjct 4789 AACTGTTTCTATACCTAGTGTTAAAGGAGTTACATCTAATAATACAACATCTTGTAATTC 4848 Query 281737 TTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 ||| ||| | || |||| | ||||||||||||||||| ||||| || || || Sbjct 4849 TTC---------ACCTAAAATAATACCAGCTTGAATAGCAGCACCGTATGCTACTGCCTC 4899 Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856 |||||| |||| | ||| | | ||| || || ||||||| | | | |||| Sbjct 4900 ATCAGGGTTAATTCCTCTATTGGGCTCTTTTCCGTTAAAAAAATCTTTTATTATTTGTTG 4959 Query 281857 TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 281916 | ||||| ||||| | || || ||||| | ||||||||| | | | || || Sbjct 4960 AATTTTAGGTATACGTGTAGAACCACCAACAAGTACAATTTCGTCTATTTTACTCTTTTC 5019 Query 281917 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGA 281976 ||||| ||| |||||||| | ||| ||||| | | || |||||||| Sbjct 5020 ATATTTTGCATCATCCAAAACTTTCTTAACTGGTTCTAATGTTTCCCTGAACAAGTCATC 5079 Query 281977 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT-TCCTTCGAACA 282035 | | |||||| ||||| ||||| || | || | | | || | | ||||| | | Sbjct 5080 ATTTAATTCTTCAAATTTTGCTCTTGTTAATGTTTC-TGAAAAGCTGTGACCTTCTACAA 5138 Query 282036 AAGAATCAACTTCAATCGTAGTTTGAGTCGA-AGAAGATAGTGCACGTTTAGCACGTTCA 282094 | |||| |||||| || | |||| | | ||||| | ||| ||| ||| Sbjct 5139 TATCTTCAATTTCAATTTGAG-TAGAGTGTACAACAGATAAATTTCTTTTTGCAATTTCT 5197 Query 282095 CATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC--AAATCTGTTTTATATT 282152 | || | |||| | | | | |||| | || || ||| | ||| | ||| || Sbjct 5198 ACTTCTTTTCTTAATTTCTGAATGGCTCT--CTTATCACTTCTAAGATCAATGTTAGTTT 5255 Query 282153 TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATT--ATCAAAATCTTCACCTCC 282210 || |||| ||| || | | | || | || || || |||||||||||| || || Sbjct 5256 TTTTCTTAAAAATTTTTATAAA--ATAATCCATAACTCTTTGATCAAAATCTTCTCCACC 5313 Query 282211 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 282270 || | |||||| || | || || ||||| || | ||||| |||| | |||| Sbjct 5314 TAAATGAGTATTACCAGCTGTTGCGTATACTTCAAATACTCCATTATCAATAACTAAAAT 5373 Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330 || |||||| |||||||| || | |||| | | | || | | ||||| ||| Sbjct 5374 AGATACATCAAATGTTCCACCTCCTAAATCATATACTAATATACTTGTTTCT---TCT-- 5428 Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390 |||||||| | ||| || || ||||||||||| |||||||| |||||||| | | || Sbjct 5429 -TTTTTATCTAAACCGTATGCCAAAGCAGCAGCTGTTGGTTCGTTAATAATACGTACAAT 5487 Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 || | ||| ||||| | || || ||||| || ||||| ||||||| ||| |||||||| Sbjct 5488 GTTCAAACCTGCAATGGTACCAGCGTCTTTTGTAGCTTGCCTTTGTGCATCATTAAAATA 5547 Query 282451 TGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTG 282510 ||||| || |||| ||| |||| | | || ||| || | | | | ||| ||| Sbjct 5548 GGCAGGTACTGTAACAACAGCATTTTTAACAGGTTTACCCAAAAATGATTGAGCTATTTC 5607 Query 282511 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATAT-TGCTTGGATTCAT 282569 ||||||||| ||| | ||||| |||||||||||| | | || || | || Sbjct 5608 TTTCATTTTTTCTAACACCATTGCACTAATTTGTTCTGGTGCAAATGTGGTATTTTTATC 5667 Query 282570 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC---TTTAAATGGCC 282626 || || || ||| || || |||| || || |||| | || || | || Sbjct 5668 CTTAATTTG-GACTCGAATATTTGGT---TTTCCTTCATTGTTTACGATTTCGTAGGGTA 5723 Query 282627 AATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTG 282686 | || || |||| | ||| || |||| ||| | |||||||| | || ||| Sbjct 5724 ACAATGTCCTATCCCTTACAACTTCCTGATCATCAAACTTCCTACCAATAAGTCTTTTAA 5783 Query 282687 CATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCA 282746 ||||||| | || | ||| || | | | ||| | |||||||||| ||||||| | Sbjct 5784 CATCAAACACCGTTTGGGTGGGGTGTAAGGTAGCCTCCAATTTGGCTGCCTCTCCAACC- 5842 Query 282747 GATGTTCTGTC--TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATT 282804 | ||| || ||| ||| || ||||| ||||| || | ||||| ||| | ||||| Sbjct 5843 -TTTCTCTCTCCATCTACAAAGGACACATACGATGGGGTAATACGATTTCCTAGTTCATT 5901 Query 282805 CGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAA 282864 | |||||| ||| | || |||| | || || || || || | |||||||| | Sbjct 5902 GTTCAAAATTTCTACTCTTCCGTTTTTGAACACGCCAACGCAGCTGTAGGTTGTTCCCAG 5961 Query 282865 ATCAATACCAAT 282876 ||| ||||| || Sbjct 5962 ATCGATACCTAT 5973 Score = 143 bits (158), Expect = 2e-28 Identities = 214/302 (71%), Gaps = 15/302 (5%) Strand=Plus/Plus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCAATGTTCTAAATACTCCA 86019 |||||||||||||| || ||||| ||||||||| || ||| || | |||||||||| Sbjct 5297 TCAAAATCTTCTCCACCTAAATGAGTATTACCAGCTGTTGCGTATACTTCAAATACTCCA 5356 Query 86020 TTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTACG 86079 || ||| | | || ||||| ||||| ||| ||||||| ||||| || | || Sbjct 5357 TTATCAATAACTAAAATAGATACATCAAATGTTCCACCTCCTAAATCATATACTAATA-- 5414 Query 86080 TTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCA 86139 ||| || ||| ||| ||||| | ||||||||||||| | ||| || || Sbjct 5415 -TAC-------TTGTTTCTTC--TTTTTTAT---CTAAACCGTATGCCAAAGCAGCAGCT 5461 Query 86140 GTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTT 86199 |||||||| ||||| || | || | ||||| ||||| || ||| || || Sbjct 5462 GTTGGTTCGTTAATAATACGTACAATGTTCAAACCTGCAATGGTACCAGCGTCTTTTGTA 5521 Query 86200 GCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATAGGT 86259 ||||| || ||||| ||||||||||| || ||||| |||| ||| || || |||| |||| Sbjct 5522 GCTTGCCTTTGTGCATCATTAAAATAGGCAGGTACTGTAACAACAGCATTTTTAACAGGT 5581 Query 86260 TT 86261 || Sbjct 5582 TT 5583 >seq389 Length=30263 Score = 172 bits (190), Expect = 4e-37 Identities = 710/1098 (65%), Gaps = 55/1098 (5%) Strand=Plus/Plus Query 281445 CATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGA 281504 |||| ||||| | |||||| || ||||||||||| ||||| ||||| | || ||||| | Sbjct 5966 CATTTGCATCTACATCAAAGGTAACTTCAATTTGTGGGACTCCTCTAGGTGCGGGTGGAA 6025 Query 281505 TCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCT 281564 | || | | | ||| | || | | ||||| || ||| | || || ||| |||| Sbjct 6026 TACCAACTAGGTCAAACGAACCTAACATTTTATTGTCGCTAGCCATTTCTCTTTCTCCCT 6085 Query 281565 CGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATT 281624 | | || |||| ||||| ||||||||||| | |||| |||| | |||| Sbjct 6086 GATATACTTTGATACTAACTTGTGTTTGATTATCAGCTGCTGTTGAGAATATTTGAGATT 6145 Query 281625 TTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTT 281684 |||| || ||||| || ||||| | ||| | || || | | |||||| ||||| Sbjct 6146 TTTTTGTTGGGATTGTCGTATTTCTGTTAATCAGTTTTGTGAAGACACCACCTAATGTTT 6205 Query 281685 CTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAG 281744 ||| ||| | || | ||| | ||||| | ||| ||||| ||| ||| || Sbjct 6206 CTATACCTAACGATAAGGGAATAACATCCAATAG--CAATA------AGTCTTTTAT--- 6254 Query 281745 TTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 281804 || || | | | || |||| ||||| ||||| |||| || |||||||| |||| Sbjct 6255 -TTCTCCTTTTAATACACCTCCTTGTATAGCTGCACCTAATGCTACTGCTTCATCTGGAT 6313 Query 281805 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT--TACCTT 281862 ||||| ||| | | | || |||||| | |||| | | ||| |||||| Sbjct 6314 TAACACTTTTCGATGGACTGTT----TTGAAATA-TTTGTTTTACTGTTTCTGATACCTT 6368 Query 281863 AGGAATACGAGATGAT-CCTCCAACTAATACAATTTCATGCACCT-GTGATT-TATCCAG 281919 || || | | | || || ||||| | | |||||||| | | || || | | || Sbjct 6369 TGGCATTCTTG-TCATACCACCAACAAGGATAATTTCATTAATTTCGTCCTTCTTTACA- 6426 Query 281920 TTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACA 281979 |||| ||| || | ||||||| ||||| | | || | | ||| || ||| Sbjct 6427 -TTTGCATCTTTTATACATTTTTCACATGGTTCTATAGTTCCTTTTAGCAAATCGTGACA 6485 Query 281980 AAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATT---CCT--TCGAAC 282034 | |||||| ||||| || ||||| | | | | ||| || ||| | || Sbjct 6486 TAATTCTTCTAATTTTGCCCTAGTTAACTTAATCTGTAAATGTTTTGGTCCTGTTTGATT 6545 Query 282035 AA-AG-AATCAACT-----TCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGC 282087 | || ||| || | ||| ||||| || ||||| | || ||| || Sbjct 6546 AGCAGTAATAAAAGGTAAATTAATTTCTGTTTGGGTTTTGCTAGATAATTCAATTTTGGC 6605 Query 282088 ACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT-TTGCTGATTGATTCAAATCTGTTT 282146 ||| |||| |||| ||| |||| ||| || | ||| || ||||| | | Sbjct 6606 TGTTTCTGCTGCTTCTCTTAATCTCTGTAAAGCTAATTTATCATTCTTT-AAATCAATAT 6664 Query 282147 TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATTATCAAAATCTTC 282204 | ||| |||| || || || | | | || || ||| | || | |||||||||||| Sbjct 6665 GTTCCTTTTTCTTAAATTCGTCTATAAA--ATATTCCAATATTCGTTGATCAAAATCTTC 6722 Query 282205 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 282264 || || | | ||||| || || ||| | |||| |||| || || | Sbjct 6723 TCCACCAAGTGATGTATTACCATTTGTTGCTTTCACTTCAAAAACACCTCCTAATATTTC 6782 Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324 ||||| || | |||| || || || |||| |||| | | | || ||| |||| Sbjct 6783 CAAAATAGATATATCAAATGTACCTCCTCCCAAATCATATAC---TGCA---ATTACTTT 6836 Query 282325 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 282384 | | |||| || | ||| | || |||||||| || |||||||| ||||||||||| Sbjct 6837 TCCATCACTTTTTTCTAATCCAAAGGCTAAAGCAGCTGCTGTTGGTTCGTTAATAATTCT 6896 Query 282385 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 282444 | ||||| | || |||||| ||||||||||||| || |||||||| ||||||||||| Sbjct 6897 TAGAACATCTAATCCTGCAATTTTTCCTGCATCTTTTGTTGCTTGTCTCTGTGAATCGTT 6956 Query 282445 AAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTT-- 282502 |||||||||||||||||||||||| || | ||||| | |||| | ||| | || Sbjct 6957 AAAATATGCAGGAACAGTAATAACAGCTTGGTGTACTTTTCTTCCTAAATA---GTTTTC 7013 Query 282503 -GCTGTTTGTTTCATTTT 282519 || |||| ||||||||| Sbjct 7014 AGCAGTTTCTTTCATTTT 7031 Score = 123 bits (136), Expect = 2e-22 Identities = 206/296 (70%), Gaps = 29/296 (10%) Strand=Plus/Plus Query 85960 TCAAAATCTTCTCCTCCCAAATG-TGTATTACCACCTACTGC---CAATGTTCTAAATAC 86015 |||||||||||||| || || || |||||||||| | ||| || | || ||| || Sbjct 6712 TCAAAATCTTCTCCACC-AAGTGATGTATTACCATTTGTTGCTTTCACT--TCAAAA-AC 6767 Query 86016 TCCATTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAAC--- 86072 || | | || | || | || | ||| ||||| || |||| || ||||| || Sbjct 6768 ACCTCCTAATATTTCCAAAATAGATATATCAAATGTACCTCCTCCCAAATCATATACTGC 6827 Query 86073 AATTACGTTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGC 86132 |||||| || ||| || |||||| |||| || | || | ||| Sbjct 6828 AATTACTTTTCCATCACTTTTTT------------------CTAATCCAAAGGCTAAAGC 6869 Query 86133 TGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATC 86192 ||||| |||||||| ||||| ||| | ||||||||||| || |||||||| | | ||| Sbjct 6870 AGCTGCTGTTGGTTCGTTAATAATTCTTAGAACATCTAATCCTGCAATTTTTCCTGCATC 6929 Query 86193 AAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTT 86248 |||||||||||||||| || ||||||||||| || ||||||||||| |||| Sbjct 6930 TTTTGTTGCTTGTCTCTGTGAATCGTTAAAATATGCAGGAACAGTAATAACAGCTT 6985 >seq700 Length=13977 Score = 127 bits (140), Expect = 2e-23 Identities = 610/952 (64%), Gaps = 37/952 (4%) Strand=Plus/Minus Query 162903 TATAATTTTATTAAAAAACATATCAAAGAGATTAA-TAGAGTTATTAGATATGATCGTGA 162961 ||| ||||||| | |||||| | ||||||| || || ||| ||| ||||| Sbjct 5609 TATGATTTTATCATGCAACATAAGGAT-AGATTAAATAAAGAGATTGATTATACACGTGA 5551 Query 162962 TTATAATC-TAACCATTTTCGGATTCAGGACTCTAGAAAAATCTTATCTTAAAAGAATCA 163020 || |||| | | ||||| || || | || |||||| || ||| | | || | Sbjct 5550 TTTTAATTATGATTATTTT-GGTTTTAAAACGTTAGAAAGGTCATATTTATTGCGTATTA 5492 Query 163021 ACaaaaaaaTTGTTGAACGTCCTCAACATTTATTTATGAGAGTAGCTATTACACTCCATT 163080 | || |||||| | ||| | || |||||||| | ||||||||| | ||| | |||| Sbjct 5491 ATAATAAAATTATAGAAAGACCACAACATTTGATAATGAGAGTATCAATTGGTATACATT 5432 Query 163081 ACAGGAAAAATGATCTCGACAGGATATTTGAAACTTATAAATATTTATCTAAAGGATATT 163140 | ||||||| || | ||| ||||| ||| | | || || ||||| Sbjct 5431 T------AGATGATCTAGAAAAAGCATTAGAAACATATCATCTGATGTCACAAAAATATT 5378 Query 163141 TTACTCACGCAACACCTACATTATTTAATGCTGGTACAACACATGAACAACTTTCAAGTT 163200 |||| || |||||||| |||||||||||| | || ||| || ||| | ||| | Sbjct 5377 TTACACATGCAACACCAACATTATTTAATTCAGGGACACCAAGACCACAGATGTCATCAT 5318 Query 163201 GTTTTTTATTGGGTAT---TGGTGATTCTCTTGAAGAAATCAGTGAATGTTGGAAAGAAT 163257 |||||||| | |||| | ||||| |||||| ||| |||| | || ||| Sbjct 5317 GTTTTTTACTATGTATGAAAGCAGATTCGATTGAAGGAATTTTTGAAACATTAAAGCAAT 5258 Query 163258 GTGCTTTAATCAGTAAACATGCAGGAGGAATTGGAATACATATGACTA-ATATTAGAGTT 163316 ||||||| || |||||| |||||| || ||||| || | || | |||| | | Sbjct 5257 GTGCTTTGATAAGTAAAACTGCAGGTGGTATTGGTGTA-GCAGTACAAGATATACGTGGA 5199 Query 163317 GAAGGAGCATATATAGCTTCAACACAAGGAGAAGCAGGTGGTT---TAAGAGTTTTGACT 163373 || |||||||| |||| | || | || || | || | | || | Sbjct 5198 CAAAATTCATATATAAGAGGAACAAATGGTATATCAAACGGATTAGTACCAATGTTAAGA 5139 Query 163374 ATTTTCAATGATATTTCAAGATACGCAAATCAAGGT---GGTAAACGACCCGGTTCTTTT 163430 |||| || |||| | ||||| | | |||||||| || ||| || || || ||| Sbjct 5138 GTTTTTAACGATACAGCTAGATATGTAGATCAAGGTGGAGGAAAAAGAAAAGGATCATTT 5079 Query 163431 GCTATTTTTATTGAACCGTGGCATGGAGACATATTCTTTTTTCTTGATCTCAAGAAAAAT 163490 || | | ||||||||| |||||| ||| ||||| ||||| ||| | | |||||| Sbjct 5078 GCAGTATATATTGAACCATGGCATTCAGATATATTTGAGTTTCTAGATTTGAGAAAAAAT 5019 Query 163491 ACTGGAGCAGAAACAGAAAGAGCCAGAGATTTATTTT-TG-GGTTTGATGATTAATGACA 163548 ||| |||| | | |||| ||||||||||||| || ||||| | | || Sbjct 5018 CATGGTAAAGAAGAATTACGAGCTAGAGATTTATTTTATGCTGTTTG--GGTACCAGATT 4961 Query 163549 TTTTCATGGAAAGAGTTTATAAAGACGATGTTTGGTCATTAATGTGTCCGTCTCAATGTC 163608 | || ||| |||||||| | || | | |||| ||||||||||||| | |||||| Sbjct 4960 TGTTTATGAAAAGAGTTAAAGAAAATAAAAATTGGACATTAATGTGTCCAAATGAATGTC 4901 Query 163609 CTAATCTTCTCAATAAATACGGAGACGAATTCACCAAAGAATATCTTAAATATGAAAGTG 163668 | | | | | || || || ||||| ||| |||| ||||||||| | Sbjct 4900 CAGGTTTAAGTGAAACATGGGGTGAAGAATTTGAAAAATTATATGAAAAATATGAA---G 4844 Query 163669 AAGGTATTTATTTGAAACAAA----TAAGAGCTATTGATTTATGGTT--CAAGATTATGG 163722 ||| | || | |||| ||| || ||| ||||||||||| | | ||| Sbjct 4843 AAGAAAATT-TAGGAAAAAAAACTGTATTAGCGCAAGATTTATGGTTTGCTATTTTACAA 4785 Query 163723 AGTCACAAATTGAGACAGGAGTTCCGTATGTTATGTTCAAAGATGCGATCAATGACAAAT 163782 ||| ||||| || ||||| || || ||| | ||| |||||| | |||| |||| Sbjct 4784 AGT--CAAATAGAAACAGGTGTACCATATATGTTGTATAAAGATTCATGTAATGCTAAAT 4727 Query 163783 CAAATCAAATTAATATTGGTGTTGTTAATGGTTCAAATTTATGTTGTGAAAT 163834 | ||||||| ||| | || |||| || ||| ||||||||||||| Sbjct 4726 CTAATCAAAAAAATTTAGGGACAATTAAATGTAGTAATCTATGTTGTGAAAT 4675 >seq100 Length=37849 Score = 122 bits (134), Expect = 7e-22 Identities = 263/385 (68%), Gaps = 10/385 (3%) Strand=Plus/Minus Query 68851 CTTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGTCGGACCAATAAAAATTTT-AA 68909 ||| || ||||||| ||||| |||||||||||||| || ||||||||||| ||||| | Sbjct 23630 CTTATCTTCTACCATATGTTTTAATCTCTGATAATAAGTAGGACCAATAAATATTTTGGA 23571 Query 68910 CTGGTAATTTTTTACCATTCATTCCATTATACATAGTTTCATTACCCCATTCTTCATAAC 68969 || ||| || | ||||| |||||| |||| | | ||||| || ||| |||||| | Sbjct 23570 CT-TTAACATTCTTCCATTATGTCCATTGTACAAAATATCATTTCCATATTTTTCATATC 23512 Query 68970 CAGCAGCAACTAAT-TCATCGTTAATGGCATTA-AGATCAACACTTGTAAATGGTGTTGC 69027 | | |||| || | || | | || || | | ||| ||| || ||||| Sbjct 23511 CTAATTTATGTAATCTCTGAGATATTTCCTGTACAGTT--ATTTTTGAAAAGGGAGTTGC 23454 Query 69028 ATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAATAAACATTCAATAAGTTGCCC 69087 |||||| | |||||| || ||| || ||| || ||||||||||| | || || Sbjct 23453 ATCGCCTTCTCCTCCTTCAATTGCTGCTACTTTACCAGCTAAACATTCAACTAAATGTCC 23394 Query 69088 AATAGTCATACGTTTGGGCATACAATTAGGATTGATAATAATATCGGGAATTAATCCAGA 69147 ||||||||| || || | | || |||||| ||||| ||||| || | |||| Sbjct 23393 AATAGTCATTCGAGAAGGAACAGCATGAGGATTCATAATGATATCTGGGAAAGTTCCATC 23334 Query 69148 TTTACTGAATAACATATCTGCTCGATGAGCTTTGTA--TCCAATGGTACCTTTTTGACCT 69205 ||| ||| ||||||| || | | | |||| ||| || ||||||||||| || Sbjct 23333 ACAACTAAATGGCATATCT--TCCGTTCGATATGTAATTCCTATAGTACCTTTTTGTCCA 23276 Query 69206 GCTCTTGACGAAAATTTATCACCTA 69230 ||| | |||||||||||||| Sbjct 23275 TGTCTACTTGCAAATTTATCACCTA 23251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740432789509650