Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088555.1_202016- 06-16] 4,025 sequences; 34,518,662 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2752 203 4e-47 >seq2752 Length=4442 Score = 203 bits (224), Expect = 4e-47 Identities = 498/745 (67%), Gaps = 15/745 (2%) Strand=Plus/Minus Query 146771 CCTAAACCGCCAGCGCCATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGGCAAAAT 146830 |||| || |||| | |||| |||| ||||||| ||||||| ||| |||||| Sbjct 4007 CCTAGACAGCCATCTCCATCTGGATTCGTCCGTGCGGGACGTAGCCCACGACCTCAAAAT 3948 Query 146831 CTTCTGCCCTGAAATCGTCTATGTCCTCCACCCG--CCTC----AAAATCTTGAGCTTGG 146884 | || || |||||||||| || |||| | || ||| | || || | ||| Sbjct 3947 CCTCGGCGGTGAAATCGTCGATTTCCTTGATGCGTTCCTTGTTGAGGATGTTCACAATGG 3888 Query 146885 GGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGA 146944 |||| |||| || | || |||||| ||| | | ||| || ||||| ||||| Sbjct 3887 GGAACGGTCTCGGTTCTCTCCGCAGCTGCTCTTTTAAAGCCTCGACATGGTTCGTGTAGA 3828 Query 146945 CGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCA 147004 | |||| || ||||| | ||| | || ||| || || ||| | ||||| || | Sbjct 3827 CATGCGTGTTCCCCATGAAGTGAATGAACTCCTTAGGTTTTAGGTTGCAGACGTGTGCAA 3768 Query 147005 CCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCC 147064 ||||| || | ||||| ||| || |||||||||||||| || ||||| | || | Sbjct 3767 CCATGAGCGTCAAAAGCGAATAGGAAGCGATGTTGAAGGGGACGCCGAGGCCGACATCGC 3708 Query 147065 CCGACCTCTGGTACAGCTGGCACGAGAGCTC---CCCGTCGGCCACGTAAAACTGGCACA 147121 ||||| ||| |||| |||||| ||||| | |||| |||||| |||||||||| Sbjct 3707 ACGACCGCTGATACATGATGCACGACAGCTCCTTCTGGTCGTTCACGTAGAACTGGCACA 3648 Query 147122 GGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCA 147181 | ||| || |||||||||||||| || ||| | || || |||||||| | | | Sbjct 3647 ACAAGTGACAAGGCGGCAGCGCCATTTCGTCCAGCGCTGCAGGATTCCAGGCAGTCATGA 3588 Query 147182 CCAGCCGCCTGCTCT-CGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCC 147240 || || | | ||| || ||| | | | | | ||| || | |||||||||| Sbjct 3587 GCATGCGAC-GATCTGTTGGATTCGTTCTCAGCATCTGGATCACATTCTTCAGCTGGTCG 3529 Query 147241 ACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGTGCCTCCA 147299 |||||||| || ||||| ||| ||| ||| ||| || || ||||| ||||| Sbjct 3528 ACGCCCTGCCCTGTGTAGTCTGT-GTGCATGTCTTTGTATGCCGCGCCGAAGTGTCTCCA 3470 Query 147300 CTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCG-CT 147358 |||||||||||| | || || | ||| ||| || || ||| | | || || || | Sbjct 3469 CTGGAAGCCGTAGCCCGGGCCGATGTCTCCGACCTCTCGGTG-GGGGAGATTGCGCGAAT 3411 Query 147359 TGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCT 147418 ||| |||||| | | | | | ||||||||| ||| ||||| | || || | | Sbjct 3410 CGAGGAACTCGCGTGTCACATTCTTGTCCCAGATCTTCACGCCCTTCTCAGAAAGATGGT 3351 Query 147419 TAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGA 147478 | | || |||| ||| || |||||||| |||| ||| || | ||||| |||| || | Sbjct 3350 TTGCGTTCGTGTCGCCGCGAATGAACCACAGCAACTCTTCGAGGACCCCTTTCCAGAACA 3291 Query 147479 CCCTCTTGGTGGTCAGCAGGGGGAA 147503 | | ||| ||||| || || || || Sbjct 3290 CACGCTTTGTGGTGAGAAGTGGAAA 3266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583458643260000