Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088555.1_202016- 06-16] 4,025 sequences; 34,518,662 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq2752 147 2e-30 >seq2752 Length=4442 Score = 147 bits (162), Expect = 2e-30 Identities = 381/571 (67%), Gaps = 11/571 (2%) Strand=Plus/Minus Query 29896 GTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29955 |||||| || | || |||| | ||| | ||||| |||| ||| | |||||| Sbjct 3832 GTAGACATGCGTGTTCCCCATGAAGTGAATGAACTCCTTAGGTTTTAGGTTGCAGACGTG 3773 Query 29956 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCAT 30015 || | |||| ||| | || || ||| |||||||| ||||| || ||||| || | Sbjct 3772 TGCAACCATGAGCGTCAAAAGCGAATAGGAAGCGATGTTGAAGGGGACGCCGAGGCCGAC 3713 Query 30016 GTCCCCCGACCTCTGGTAGA-GCTGACACGAGAGCTC--TCCG-TCGCTCACGTAAAACT 30071 || | ||||| ||| || | | || ||||| ||||| || | ||| ||||||| |||| Sbjct 3712 ATCGCACGACCGCTGATACATGATG-CACGACAGCTCCTTCTGGTCGTTCACGTAGAACT 3654 Query 30072 GACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGC 30131 | |||| ||| || || || || ||||| | ||| || || |||||||| Sbjct 3653 GGCACAACAAGTGACAAGGCGGCAGCGCCATTTCGTCCAGCGCTGCAGGATTCCAGGCAG 3594 Query 30132 ACACGATGATGCGCCTGTCTTCTGGGTT-GTTC-CTG-ATGAGGTCCACGGCGTTTTGCA 30188 || || ||||| | ||| ||| || |||| | | || || ||| || | || Sbjct 3593 TCATGAGCATGCGACGATCTGTTGGATTCGTTCTCAGCATCTGGATCACA---TTCTTCA 3537 Query 30189 GCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAAT 30248 |||| || || ||| ||| | |||||||| |||||| |||| | || ||||| | Sbjct 3536 GCTGGTCGACGCCCTGCCCTGTGTAGTCTGTGTGCATGTCTTTGTATGCCGCGCCGAAGT 3477 Query 30249 GCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCC 30308 | ||||||||||| ||||| |||| || | |||||| | || | ||| || | Sbjct 3476 GTCTCCACTGGAAGCCGTAGCCCGGGCCGATGTCTCCGACCTCTCGGTGGGGGAGATTGC 3417 Query 30309 TCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGA 30368 | || | || || | | | || |||||||||||| || ||||||||||| | Sbjct 3416 GCGAATCGAGGAACTCGCGTGTCACATTCTTGTCCCAGATCTTCACGCCCTTCTCAGAAA 3357 Query 30369 GCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCC 30428 | | || | ||| ||| || | | ||||||||||| ||| || | ||| | |||| Sbjct 3356 GATGGTTTGCGTTCGTGTCGCCGCGAATGAACCACAGCAACTCTTCGAGGACCCCTTTCC 3297 Query 30429 AAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 | || || | ||| || ||||| || ||||| Sbjct 3296 AGAACACACGCTTTGTGGTGAGAAGTGGAAA 3266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406290468570300