Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088565.1_202016- 06-16] 2,227 sequences; 38,010,039 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq459 89.7 1e-12 seq5 86.0 1e-11 >seq459 Length=69929 Score = 89.7 bits (98), Expect = 1e-12 Identities = 57/61 (93%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 142059 GTGGCGCAAT-GGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 31944 GTGGCGCAATTGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAATCCCGC 31885 Query 142118 C 142118 | Sbjct 31884 C 31884 >seq5 Length=54640 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 142510 TTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCC 142566 ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| Sbjct 38683 TTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCAGGGGTTCGAGCCCC 38739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027807472282907