Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088565.1_202016- 06-16] 2,227 sequences; 38,010,039 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq129 86.0 1e-11 >seq129 Length=6666 Score = 86.0 bits (94), Expect = 1e-11 Identities = 293/449 (65%), Gaps = 11/449 (2%) Strand=Plus/Plus Query 150291 TAACTGATCTTGCAGCAGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTT- 150349 |||||| | | ||| || |||||| | || ||| | |||||| | || | ||| || Sbjct 3336 TAACTGCTTTAGCAAGAGCTGGTAAATTAGACCCAGTTATTGGTAGAGATAACGAAATTA 3395 Query 150350 GATGATCTAATTCAGATTCTTTCTCGTAAAACCAAAAAGAATGGTGCGTTAGTTGGTGAA 150409 || || ||| | |||||||| || | | ||| ||||| || | || | || || Sbjct 3396 GAAGAGCTA-TACAGATTCTATCGAGGAGAACGAAAAATAACCCTATTTTGTTAGGAGAT 3454 Query 150410 CCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGAT 150469 || || ||||||||||| || ||||| || ||||| || | | || ||| Sbjct 3455 CCTGGAGTTGGTAAAACTGCTATTGTTGAAGGTTTAGCCATTAAAATTGTACAAGGAGAT 3514 Query 150470 GTTCCAGATTCTATGAAAGATGTTGAAATTC--TTTCTTTGAATATGGGTGCATTTACTG 150527 || || || ||| | |||| | |||| | |||| || ||||| | || | | || Sbjct 3515 GTACCTGACTCTTTAAAAG--GAAGAAAATTAGTTTCATTAGATATGTCTTCACTAATTG 3572 Query 150528 CTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAAGAACTAA 150587 | ||| | || ||| | || || || || || | || | | | | ||| ||||| || Sbjct 3573 CCGGTGCGAAATATAGAGGAGATTTTGAGGAGAGATTAAAAAGTATACTAAAAGAAGTAC 3632 Query 150588 AAGAACGCGATG---ATGTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTG 150644 |||| || | | ||| || |||| || |||||||| ||||| || | ||||||| Sbjct 3633 AAGATGCTGAAGGACAAGTTGTTATGTTTATAGATGAAATTCATACAGTTGTAGGTGCTG 3692 Query 150645 GTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCG 150704 |||| || | ||| || | ||| | ||||| ||||||||| || || | | Sbjct 3693 GTGCTGTTGCTGAAGGTGCTCTTGATGCTGGTAATATTTTAAAACCTATGTTAGCTAGAG 3752 Query 150705 GTGAAATTCG-TGTCATCGGTGCAACAAC 150732 | ||| || | ||| || ||||| || || Sbjct 3753 GAGAACTTAGATGT-ATTGGTGCTACTAC 3780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147557655301046