Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088485.1_202016
-06-16] 1,914 sequences; 35,654,824 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq213 87.8 2e-12
>seq213
Length=18882
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 64226 AATC-TAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCG 64284
|||| |||| |||| || | || |||||||| || ||||| ||||| | | || |
Sbjct 363 AATCGTAAG-ACTAAGTGTAAAGTAGATTCTTTCTGGATGTTATAATCCGATAATGTTCT 421
Query 64285 CGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTC 64344
| || || | || || || || | || | | ||||| ||||| |||||||||||
Sbjct 422 TCCATCCTCTAATTGTTTTCCTGCGAATATTAATCTTTGCTGATCGGGTGGAATTCCTTC 481
Query 64345 TTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGT 64404
|| ||||| ||||| ||||||| ||| | ||||| | || || |||| ||
Sbjct 482 CTTATCTTGAATTTTCGCCTTTACATTCTCAATAGTATCCGATGATTCTACATCTAAGGT 541
Query 64405 TACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
| |||||| || ||||| ||||| ||||| || ||||||
Sbjct 542 GATGGTCTTTCCTGTCAAGGTTTTCACGAATATCTGCATT 581
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
|||| | ||||| || | || || ||||| || ||||| ||||| | | || |
Sbjct 594 AATCGTAACACTAAGTGCAGGGTAGACTCTTTCTGGATGTTATAATCCGATAATGTTCTT 653
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| ||||| | || || || ||| | || | | || || ||||| |||||||||||
Sbjct 654 CCATCTTCCAATTGTTTTCCTGCAAATATTAATCTTTGTTGATCGGGTGGAATTCCTTCC 713
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| ||||| ||||||| ||| | ||||| || || || || | ||
Sbjct 714 TTATCTTGAATTTTCGCCTTTACATTCTCAATCGTATCCGAGGACTCAACATCCAAGGTG 773
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
| |||||| || || || ||||| ||||| || ||||||
Sbjct 774 ATGGTCTTTCCTGTTAAGGTTTTCACGAATATCTGCATT 812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499632845998160
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |