Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088485.1_202016 -06-16] 1,914 sequences; 35,654,824 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq35 370 7e-97 seq112 291 5e-73 seq57 210 1e-48 seq84 181 7e-40 seq150 140 2e-27 seq21 113 3e-19 seq45 104 2e-16 seq37 98.7 6e-15 seq11 95.1 8e-14 seq97 89.7 3e-12 seq2 87.8 1e-11 >seq35 Length=86519 Score = 370 bits (410), Expect = 7e-97 Identities = 673/969 (69%), Gaps = 33/969 (3%) Strand=Plus/Minus Query 475318 TGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGA 475377 ||| ||| |||| || | | ||||||||| | || |||| ||||| || ||||| Sbjct 64169 TGATGTATCTTTGTTAACTATAGAAGATGGTATATTTGAAGTAAAGGCAACTGCAGGAGA 64110 Query 475378 TTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTTGAAGATTT 475437 | | || | || || |||||||||||||| ||| | ||| | ||||| |||||||| Sbjct 64109 TACTCACTTAGGAGGAGAAGATTTTGATAACAGATTGGTAAACTTTTGTGTAGAAGATTT 64050 Query 475438 CAAGAGGAAAAATAAAGTT---GATCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAG 475494 ||||| ||||||| || ||| | |||| | | || |||||| ||| | | || Sbjct 64049 TAAGAGAAAAAATAGAGGAAAAGATTTATCAAAAAATAGTAGAGCATTGAGAAGATTGAG 63990 Query 475495 AACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGT 475554 ||| ||||| | || || || | | ||||| |||| ||| | ||| | ||| | Sbjct 63989 AACCCAATGTGAGAGAGCAAAACGTACGTTGTCTTCATCTACCCAAGCAACTATAGAAAT 63930 Query 475555 TGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGA 475614 |||||| ||||||||||| |||||||| | | | ||| || |||| ||||||||| Sbjct 63929 TGATTCACTTTTTGAAGGTATTGATTACAGTGTAACTGTTAGCAGAGCTAGATTTGAAGA 63870 Query 475615 TATTTGTTCTGATCTCTTTA-GAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATT 475673 | ||| ||| || ||| | | ||| | | || || || ||||| | | |||| Sbjct 63869 GTTGTGTATTGA-CTATTTCCGTGATACATTAGTTCCAGTCGAGAAAGTTTTAAAAGATG 63811 Query 475674 CTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTC 475733 | | | || || | || |||||| |||| | || || |||||||||||||||| Sbjct 63810 CAATGATGGATAAGAAAAGTGTACATGAAGTTGTGTTAGTTGGTGGTTCAACAAGAATTC 63751 Query 475734 CAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAA-AAGTT---AAATGAAAGT 475789 ||||||| | | || || || |||||||| || ||| | | || || Sbjct 63750 CAAAAATTCAAACATTGATTAAGGAATTCTTTAATGGAAAGGAAGCTTGTAGATCAA--- 63694 Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 |||||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||| Sbjct 63693 -TAAATCCTGATGAAGCTGTTGCTTATGGTGCAGCTGTTCAAGCAGCCATTTTATCAGGT 63635 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACT--TGTT-GACGTAACTCCACTTTCATTA 475906 | ||| | | | || || ||| |||| |||| || ||| | | | || ||| Sbjct 63634 GA-TCAATCTA-ATGCTGTTCAAGATT-TACTCCTGTTAGATGTATGTTCCTTATCCTTA 63578 Query 475907 GGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCA 475966 ||| | ||||| | || || ||||||| || | ||||| |||||||| | || ||| Sbjct 63577 GGTTTAGAAACTGCAGGTGGTGTTATGACCAAGTTAATTGAGAGAAATACAACAATTCCA 63518 Query 475967 TGCAAAAAA---TCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATC 476023 |||||||| ||||| | ||| | || ||| ||||||||||| || |||| || Sbjct 63517 -GCAAAAAAAAGTCAAA--TTTTTACTACATATGCTGATAATCAACCAGGTGTATTAATT 63461 Query 476024 CAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAAT 476083 || | | ||||| |||||| ||| |||||||| || || | |||| || || Sbjct 63460 CAGGTATACGAAGGAGAAAGAGCATTAACTAAAGACAACAATTTGTTAGGAAAATTCCAT 63401 Query 476084 CTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATT 476143 || || |||||||| ||||| || ||| ||| || |||||||||||||| || |||||| Sbjct 63400 CTAGATGGTATTCCACCTGCACCAAGAAAAGTACCACAAATTGAAGTTACATTCGATATT 63341 Query 476144 GATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGT----AACAAGAGTAA 476199 |||||||||||||| | |||||||| ||| || ||||| | | ||||| || Sbjct 63340 GATGCAAATGGTATATTAAATGTTACAGCTGTGGAAAAATCAACTGGTAAACAA----AA 63285 Query 476200 AAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGT 476259 |||| || ||||| || || |||||||| | |||| ||||| | |||||||| Sbjct 63284 TCATATTACCATTACCAATGATAAAGGTAGATTATCACCAGAAGAAATTGATCGTATGGT 63225 Query 476260 TGATGAAGC 476268 | |||| || Sbjct 63224 TAATGACGC 63216 Score = 237 bits (262), Expect = 1e-56 Identities = 421/607 (69%), Gaps = 9/607 (1%) Strand=Plus/Minus Query 474319 GTCCAGAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCA 474378 ||||| || || ||||||||||| | ||||| || || ||||| | ||| ||| Sbjct 64781 GTCCAATATAGCCATTGGTATTGACCTTGGAACGACCTATTCCTGTGTTGGTGTATGGAG 64722 Query 474379 AAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGT 474438 ||||| || ||||| || ||||| |||||||| ||||| ||||| || ||||| || || Sbjct 64721 AAATGAGAATGTAGATATTATTGCTAATGACCAGGGTAACAGAACTACCCCATCGTACGT 64662 Query 474439 TTCTTTTACTGAAACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTA 474497 | ||||||| || || || | || | ||||| |||||||| || |||||| ||| | Sbjct 64661 TGCTTTTACCGATACGGAGAGAT-TAATTGGTGATGCTGCAAAGAATCAAGTTGCTAGAA 64603 Query 474498 ATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCA 474557 |||||| || || |||||||||| || || || ||||| | || ||| || | Sbjct 64602 ATCCTGAAAACACAGTTTTTGATGCAAAGAGGTTAATTGGAAGGAAATTTACCGAATCTT 64543 Query 474558 CTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGT--GATAAATGTTGG-TGGTAAAC 474614 | || || ||||||| |||||||| |||| || || | |||| | |||| Sbjct 64542 CAGTACAGAGTGATATGAAGCATTGGCCATTTACCGTAAAATCAGGATTGGAAGAGAAAC 64483 Query 474615 CATATATAGAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTT 474674 | || |||| | || ||| || | ||| |||| || ||| |||| || | Sbjct 64482 CCATGATTGAAGTTACCTACCAAGGAGAGAAAAAATTATTTCACCCAGAAGAAATATCAT 64423 Query 474675 CAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTG 474734 | ||||||||| || |||||| ||| || | | | | ||| || | | Sbjct 64422 CCATGGTTTTACAAAAGATGAAAGAAAATGCTGAAGCCTTTTTGGGAAAATCTATTAAGA 64363 Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || |||||||| || || |||||||||||||||||| | |||||||| || |||| Sbjct 64362 ATGCTGTTATTACTGTCCCTGCTTATTTTAATGATTCTCAAAGACAAGCAACAAAGGATG 64303 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | |||| || ||||| | |||||| | | |||||||| |||||||| || || || Sbjct 64302 CTGGAACTATCGCAGGATTGAATGTTATGAGAATTATTAACGAACCAACTGCTGCAGCTA 64243 Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGACAA--AGAAGTAAATGTTTTAATCTTTGATTG 474912 ||||||||||| | |||| || || || ||| ||| ||||||| || |||| Sbjct 64242 TTGCTTATGGTTTACATAAAAA--AGGAAAAGGTGAAAAAAACATTTTAATTTTCGATTT 64185 Query 474913 TGGAGGT 474919 |||||| Sbjct 64184 AGGAGGT 64178 >seq112 Length=225903 Score = 291 bits (322), Expect = 5e-73 Identities = 945/1440 (66%), Gaps = 73/1440 (5%) Strand=Plus/Minus Query 591851 CTTCTTGAATAAATATTTTCGGTAAATGGTTCAATACATTCATTATATCCTTTAATTTGA 591910 ||||| | |||||||| || ||||||||| | ||||||| | |||| ||||| Sbjct 222049 CTTCTGTAGTAAATATTGCTAGTGTATGGTTCAAAAGATTCATTGTTTCCTAATATTTGT 221990 Query 591911 GATGTACTTGCTGTTGGCATACATG-TAGTAGTTAAACTGTTTCTAACACCATATATCAT 591969 || ||| ||| || |||||| || || ||| || || || | |||| | | | Sbjct 221989 GAAGTAGATGCAGTAGGCATAGGTGCTAAAAGT-AAGGAATTCCTTAGTCCATGTTTTTT 221931 Query 591970 TATCTGTTCCCGAAGAGTTTTCCAATCCCACATTCCACTTAATTTATCTTCACCA---AG 592026 || | ||| ||| ||| || ||| |||||| | |||| | ||| | | Sbjct 221930 AATTTTTTCTTTAAG----TTC--ATTCCA-ATTCCAGT--ATTTGTTATCAACTTTGAT 221880 Query 592027 ATTCCATAAATCAAACTGGAATTTACCTTTTGAAAGTGGACTTCCCCAAAAGGTTTCATA 592086 |||||| | ||||||||| | |||||| | |||||| || | | | |||||| Sbjct 221879 ATTCCACATATCAAACTGAAGAATACCTTGGCTAGCTGGACTACCTTCATAAGATTCATA 221820 Query 592087 TGGACCAGATTCTTTGGCCATTTGTAATGA---TTCTGTCATTGTTCCAAAATATATAGT 592143 | ||| | ||| || | || | || |||| | || || | || ||||| Sbjct 221819 TTTCCCATAAATTTTAGCTAATTCCATAGACATTTCT---AATGCAGCATAGTACATAGT 221763 Query 592144 TTCAAATATTTTCCTATTAAGATCTCGAGCAATATCAGAATCAAATGGA-ATTTTAAATA 592202 |||||| ||| | |||| | ||| || ||| || || | ||| || ||||| Sbjct 221762 TTCAAAAATTCTTTTATTTAATTCTTTTGCTTCATCTGATTCGTAAGGATATCTTAAA-- 221705 Query 592203 TAGCAAACACAT--CGGCTAATCCTTGTACACCAACGCCAATAGGTCTATGGCGTAAATT 592260 |||| | | | | ||||||||||||||||||| || || |||||||| | || Sbjct 221704 -AGCATAAATGTGTCAGCTAATCCTTGTACACCAATTCCTATTGGTCTATGTCTCCTGTT 221646 Query 592261 TGAAACACGTGTTTTTTCTACTGGATAATAATTTACATCAATAATATTATTTAAATTTCT 592320 ||| | || | || |||||||||||| |||||||| || | ||||||||| Sbjct 221645 TGATCTCTCAGCTTCCTTAACAGGATAATAATTTCTTTCAATAATTTTGTCTAAATTTCT 221586 Query 592321 TGTAATAATTCTTGCGACCTTGTACAATTTATTATAATCAAACTCTGGAACACCGTTTTC 592380 ||||||||| ||| | | || ||||| ||| ||| ||| ||| ||||| Sbjct 221585 CGTAATAATTTTTGTAATTTCATATAATTTTTTAAAATTAAA------AACTTTTTTTTC 221532 Query 592381 A-TGAATAATAAATTTAGGTAAACAAATTGATGACAAATTACAAACTGCATATTCATCTG 592439 || || ||||||| |||| ||| |||| || |||||||| ||| |||||||| Sbjct 221531 TGTGTCTAC-AAATTTACATAAAGCAATAGATGCTAAGTTACAAACAGCAACTTCATCTG 221473 Query 592440 CAGATGAGAATTCTACAATTTCACAACAAAGATTTGAGCCATTAATTACGCCTATATTAA 592499 |||| |||||| |||||||| || ||||| | |||||| |||| ||| Sbjct 221472 GTGATGTATATTCTATTATTTCACAGCATAGATTACTACATTTAATTGTACCTAAATTTT 221413 Query 592500 TCTGATTTGATTTTTGATTGATAGCATCTTTAAACAATATGTATGGTACACCTGTTTCAA 592559 | ||||| ||||| ||| | |||||| |||| |||||||||||||||||||||| Sbjct 221412 TTTGATTAGATTTAGCATTACATGAATCTTTGTACAACATGTATGGTACACCTGTTTCAA 221353 Query 592560 TTTGTGTTTCCATTATTTTAAACCATAAATCTCTTGCT----TTGATTTGTTTTATAAAT 592615 | || ||| | || ||||||||||||| ||| | ||| ||| ||||| Sbjct 221352 TCTGACTTTGTAAAATAGCAAACCATAAATCTTGAGCTAATACAGTTTTTTTTCCTAAAT 221293 Query 592616 CTACCCTCATTTTCATA--TTTAAGATAAGCTTTATTAAATTCTTCACCATAT-TTTCCT 592672 | || | |||||| ||| | |||| ||| | |||||||||||| || |||| Sbjct 221292 TT----TCTTCTTCATACTTTTCATATAA--TTTTTCAAATTCTTCACCCCATGTTTCAC 221239 Query 592673 ACAATATCTGGACATTGTGATGGACACATAAGTGACCAATTTTCATCTTTTTCAACACGA 592732 ||| | ||||||||| ||||||||| | | |||||||| || || | ||| | Sbjct 221238 TCAA-ACCTGGACATTCATTTGGACACATTAAAGTCCAATTTTTATTTTCCTTAACTCTT 221180 Query 592733 TCCATGAAAATATTATTAATCATTAATCCAAGGAATAAATCTCTGGCTCTTTCCGTTTCA 592792 | ||| || | || || | | || ||||||||||| |||||| ||| Sbjct 221179 TTCATAAATAAATCTGGAACCCAAACAGCATAAAATAAATCTCTAGCTCTTAATTCTTCT 221120 Query 592793 GCACCAGTATTTTTCTTTAGATCAAGGAAGAAAAATATATCACCATGCCAAGGTTCAATA 592852 |||| |||||| | | ||| || || |||||| || |||||| ||||||||| Sbjct 221119 TTACCATGATTTTTTCTCAAATCTAGAAATTCAAATATGTCTGAATGCCATGGTTCAATA 221060 Query 592853 AATACCGCAAATGAACCAGCTCTTTT---ACCACCTTGATTCGCATATCTGGCTATGTCA 592909 |||| |||||||| || |||||| |||||||||| ||||||| ||| | || Sbjct 221059 TATACTGCAAATGATCCTTTTCTTTTTCCTCCACCTTGATCTACATATCTAGCTGTATCG 221000 Query 592910 TTATATATTGATAATACT----CTCAATCCGTTAGATGTACCTTGAGTAGAACTAATATA 592965 ||| | | | ||| | | || |||||||| || |||| | ||| || ||||| Sbjct 220999 TTAAAAACTCTTAACATTGGTACT-AATCCGTTTGAAATACCATTAGTTCCTCTTATATA 220941 Query 592966 --AGCTCCTTCAACCCGAACATTAGACATATTAATACCTATACCTCCCGCAAATTTACTA 593023 | || || || | || || | | ||| ||||| || ||| |||||| Sbjct 220940 TGAATTCTGTCCACGTATATCTTGTACTGCT--ACACCAATACCACCTGCAGTTTTACTT 220883 Query 593024 ATAACAGCACAATCTTTCCAAGATTCACCTAATGATGTCAT---ATCATCTTTTACACCC 593080 || | |||||| | ||| | | |||| | | | || ||| |||| | || | Sbjct 220882 ATCAAAGCACATTGTTTTAATGTTTCAAAAATTCCTTCAATAGAATCTGCTTTCATACAC 220823 Query 593081 ATTAAAAAACAACTTGATAATTGT--TCATAAGGAGTACCCGCATTAAATAAAGTTGGAG 593138 | ||||||||| ||| | |||| || | || || || | ||||||||| ||||| | Sbjct 220822 AGCAAAAAACAAGATGACATTTGTGGTCTT--GGTGTCCCTGAATTAAATAATGTTGGCG 220765 Query 593139 TTGCATGAGTAAAATATCCTTCTGATAACATTTCATATGTTTCAAAAATTTTAGATAAAT 593198 ||||||| ||||||||| || ||| | || | ||| ||||| || ||| || | Sbjct 220764 TTGCATGTGTAAAATATTTTTGTGACATCAGATGATAGGTTTCTAATGCTTTTTCTAGA- 220706 Query 593199 TGCCTGTTCTATAATGTAGTGCAATAGCTACTCGCATCCATAAATGTTGAGGTCTTTCTA 593258 | |||| |||||| |||| | ||||| ||| ||||| || |||||||||| Sbjct 220705 ----TCATCTA-AATGTATACCAATTGATACTCTCATAATCAAATGCTGTGGTCTTTCTA 220651 >seq57 Length=228827 Score = 210 bits (232), Expect = 1e-48 Identities = 470/705 (67%), Gaps = 17/705 (2%) Strand=Plus/Plus Query 475595 ACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTT 475654 ||||| || ||||||||||| | | ||| | || || |||| | ||||| ||| Sbjct 69659 ACAAGAGCAAAATTTGAAGAATTAAATGATGACTTGTTCAGGGAAACTCTAGAACCAGTT 69718 Query 475655 GAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTA 475714 | ||||| | ||| | ||| ||| || || | | |||||||| ||||| Sbjct 69719 AAGAAAGTTTTGGATGATGCAAAATATGAAAAGAGTAAAATAGACGAAATTGTACTTGTT 69778 Query 475715 GGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAA 475774 || ||||| ||| | || || ||||| | |||| | | | |||||| || ||| Sbjct 69779 GGTGGTTCTACACGTATACCTAAAATTCAACAAATAATAAAAGATTTTTTTAACGGAAAA 69838 Query 475775 AAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCA 475834 | ||| | | | || ||||||||||| || |||||||| |||||| | ||||| Sbjct 69839 GAACCCAATAGAGGAATTAACCCTGATGAAGCCGTAGCATATGGTGCTGCTATTCAAGCT 69898 Query 475835 GCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACT 475894 | |||| | | |||| || ||| || | || ||||| | | || |||||| Sbjct 69899 GGTATTATCTTAGGTGAA------GAGTTACAAGATG---TTGTATTATTAGATGTAACT 69949 Query 475895 CCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAAT 475954 || | || ||||| | ||||||||||| || ||||||||| | |||||| | |||||| Sbjct 69950 CCCTTAACACTAGGTATAGAAACAGTTGGTGGTATTATGACTCAACTTATTAAAAGAAAT 70009 Query 475955 ACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 || || || ||||||||| || ||||||||| ||| ||||||||| || || Sbjct 70010 ACAGTAATTCCGACAAAAAAATCACAAACATTTTCCACCTATCAAGATAATCAACCAGCT 70069 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 ||| || ||| | |||||||| |||||| ||| ||||| |||||| | | ||| Sbjct 70070 GTATTAATACAAGTATTTGAAGGGGAAAGAGCATTAACTAAGGATAATCATTTGTTAGGA 70129 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | ||| | || || || || ||||| | ||||| || || |||| ||||| || Sbjct 70130 AAATTTGAACTATCTGGCATACCACCTGCACAAAGAGGTGTACCCAAAATAGAAGTAACA 70189 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAAC--- 476191 || | ||||| ||||||||| | |||| || ||||| || ||| Sbjct 70190 TTCACTGTTGATAAAAATGGTATATTACATGTAGAAGCAGAAGATAA----AGGAACAGG 70245 Query 476192 -AAGAGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCA 476250 || |||||| ||| || |||||||| || |||||| || | |||||||||| | Sbjct 70246 AAAAAGTAAAGGTATTACCATTACAAATGATAAAGGTAGACTTTCAAAAGAACAAATAGA 70305 Query 476251 ACGTATGGTTGATGAAGCCAAAGAGTTTGAAGAAGCTGATAACAA 476295 | ||| || | || || || | |||| ||| | ||||| || Sbjct 70306 AAAAATGATTAACGATGCAGAAAAATTTGCAGATGAAGATAAAAA 70350 Score = 120 bits (132), Expect = 2e-21 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 474653 TTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCA 474712 ||| |||| ||||||||| | ||||||| |||| || |||||| ||| || ||| Sbjct 69113 TTTGCACCAGAACAAATTAGTGCAATGGTGTTAGAAAAGATGAAAGAAATAGCTCAATCA 69172 Query 474713 TATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCT 474772 | | | || || || | |||| || |||| || || || |||||||||||| | Sbjct 69173 TTTTTGGGTAAACCTGTTAAAAATGCTGTGGTTACAGTACCTGCCTATTTTAATGATGCA 69232 Query 474773 CAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATT 474832 ||| | ||||| || ||||| || || | ||||||||| | || || ||||||| ||| Sbjct 69233 CAAAGGCAAGCTACAAAAGACGCTGGTACCATTGCAGGTTTGAACATTGTACGTATCATT 69292 Query 474833 AATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || ||||||||||| || || | || || ||| | ||||| || Sbjct 69293 AACGAACCAACAGCTGCTGCTTTGGCATACGGTTTAGATAAAAA 69336 >seq84 Length=401228 Score = 181 bits (200), Expect = 7e-40 Identities = 456/679 (67%), Gaps = 28/679 (4%) Strand=Plus/Plus Query 475595 ACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTT 475654 || ||||| ||||| ||||| | ||| |||| | || | | ||| || ||||| | Sbjct 160207 ACTAGGGCAAAATTAGAAGAATTATGTCATGATTTGTTAAAAGGAACTATAGAACCATGT 160266 Query 475655 GAACAAGT-TCTCAGAGATTCTAAACTTGACAAATCAC-AAGTCCATGAAATTGTTCTTG 475712 ||| |||| | | | |||| | ||| | | || || || | |||||||| | |||| Sbjct 160267 GAA-AAGTGTATAAAAGATGC-AAATGTAAAGAAGGACGAAATTAATGAAATTATCCTTG 160324 Query 475713 TAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCAT-CATAT-TTTAATGG 475770 | || ||| |||||||| ||||| || ||||| || | | || || ||| | Sbjct 160325 TTGGTGGTATGACAAGAATGCCAAAGGTATCAGAAA--CTGTAAAACAAATATTTCA--- 160379 Query 475771 TAAAAAGTTAAATGAAA-GTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCC 475829 ||| ||| | |||| |||| |||||||||||||| || |||| || || ||| | | Sbjct 160380 -AAACAGTCCATCGAAAAGTGTTAATCCTGATGAAGCAGTAGCATTAGGTGCAGCTATAC 160438 Query 475830 AAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACG 475889 ||| || | | ||| ||| || | | || || | || ||||| | |||| Sbjct 160439 AAGGAGGTGTATTAAAAGGAGAAATAAAAGA----CTTATTACTATTGGA--TGTT---- 160488 Query 475890 TAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACA 475949 | ||| | || |||||| | |||||| | || || || | || || || ||| ||| Sbjct 160489 --ATTCCCTTATCGTTAGGTATAGAAACATTAGGTGGTGTTTTCACAAAACTGATTAACA 160546 Query 475950 GAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAA 476009 ||||||| | |||||| |||||||| || |||| || || |||||||||||| Sbjct 160547 GAAATACGACAATCCCAACAAAAAAATCTCAAATATTCTCAACAGCAGCTGATAATCAAA 160606 Query 476010 CAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAAC 476069 || || | ||| || | | | ||||||||||| || | ||| |||||||| | Sbjct 160607 CACAAGTTAGTATCAAAGTATATCAAGGTGAAAGAGAAATGGCTAGCGATAATAAAATGT 160666 Query 476070 TTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAG 476129 | || | ||| | | | |||||||| || || || |||||||| || |||||||||| Sbjct 160667 TAGGCTCATTTGACTTAGTTGGTATTCCACCCGCACCTAGAGGAGTCCCACAAATTGAAG 160726 Query 476130 TTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTA 476189 |||| |||||| | |||||||||| ||| | || | | ||| || ||| | | Sbjct 160727 TTACCTTTGATGTAGATGCAAATGCAATTATCAACATATCAGCTATCGACAAAATGACAA 160786 Query 476190 ACAAGAGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTC 476249 | |||| | | ||||| ||| ||| | | ||||| |||| | ||||| ||||| Sbjct 160787 ATAAGAAACAGCAAATAACCATT-CAA--AGTAGTGGTGGATTGAGCAAAGAAGAAATTG 160843 Query 476250 AACGTATGGTTGATGAAGC 476268 || ||||| | ||||| Sbjct 160844 AAAAGATGGTACAAGAAGC 160862 Score = 132 bits (146), Expect = 3e-25 Identities = 255/372 (69%), Gaps = 23/372 (6%) Strand=Plus/Minus Query 290635 AAAATCGTTAATAACAAAATTCATTATTTCATAATCAATATCTTCTCCACCCAAATAAGA 290694 ||| |||| |||| | | | || |||| | ||||| |||||||||||| | | | Sbjct 160038 AAATTCGTCTATAAAATATTCCAATATTCGTTGATCAAAATCTTCTCCACCAAGTGATGT 159979 Query 290695 ATTACCTGTCATAGCTAATGTTCTAAATAAACCGTCATTAATATT--CATTAATGAAATA 290752 |||||| | | ||| | ||| | ||| | ||||||| || | || ||| Sbjct 159978 ATTACCATTTGTTGCTTTCACTTCAAAAACACCTCC--TAATATTTCCAAAATAGATATA 159921 Query 290753 TCTAATGTTCCTGCACCAAAATCGTATATAATAACATTACCTCCATTTTTATTTGTCCA- 290811 || ||||| ||| | || ||||| |||| || || || | || |||| Sbjct 159920 TCAAATGTACCTCCTCCCAAATCATATA------------CTGCAATT--ACTTTTCCAT 159875 Query 290812 -AGTTTTGCTTCCAAGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTA 290870 | |||| |||||| ||| | | ||| | ||||||||||||||| || |||||||||| Sbjct 159874 CACTTTT--TTCCAAT-CCAAAGGCTAACGCAGCTGCTGTTGGTTCGTTAATAATTCTTA 159818 Query 290871 ATACATCAAGACCTGCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAA 290930 ||||| | |||||||||||| | | |||| ||||| || | || | ||| |||| Sbjct 159817 GAACATCTAATCCTGCAATTTTTCCTGCATCTTTTGTTGCTTGTCTCTGTGAATCGTTAA 159758 Query 290931 AATAAGCAGGGACTGTAATAACAGCtttttccactttctttttcaaataattttctgcca 290990 |||| ||||| || ||||||||||||| | ||||| || ||||||||||| || Sbjct 159757 AATATGCAGGAACAGTAATAACAGCTTGGTGTACTTTTCTTCCTAAATAATTTTCAGCAG 159698 Query 290991 tttgttttattt 291002 ||| ||| |||| Sbjct 159697 TTTCTTTCATTT 159686 Score = 123 bits (136), Expect = 2e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 474647 AAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCG 474706 ||| ||| ||| || |||||| | || ||||| | ||||||||| |||| || Sbjct 159643 AAAAAATATTCCCCTAGTCAAATTGGTGCATGTGTTTTGGAAAAAATGAAAGAAACTGCT 159702 Query 474707 AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAAT 474766 ||| | ||| | ||||| | || || ||||||||||| ||||||||||| Sbjct 159703 GAAAATTATTTAGGAAGAAAAGTACACCAAGCTGTTATTACTGTTCCTGCATATTTTAAC 159762 Query 474767 GATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGT 474826 ||||| || | |||||||| |||||||| |||| ||||||||| | ||||| || | Sbjct 159763 GATTCACAGAGACAAGCAACAAAAGATGCAGGAAAAATTGCAGGATTAGATGTTCTAAGA 159822 Query 474827 ATTATTAATGAACCAACAGCAGCCGC 474852 |||||||| |||||||||||||| || Sbjct 159823 ATTATTAACGAACCAACAGCAGCTGC 159848 >seq150 Length=459895 Score = 140 bits (154), Expect = 2e-27 Identities = 129/160 (81%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 ||||| || || |||||||| ||||||||||||||| | || ||| | ||||| |||||| Sbjct 294678 GATTTCTCTTCCCCAAATATAGCAAAGGAAATGCATGTAGGTCACCTAAGATCAACAATA 294619 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACA--AAGAATAA 817217 | || || | | |||||||| | |||||||| | | || |||||| |||| ||| Sbjct 294618 TTAGGAGATAGTATATGTAGAATTTTTGAATTTT-TAAAAGT-TAGTACAAGAAGAGTAA 294561 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAAT 817257 ||||| ||||||||||||||||||||||||||||| |||| Sbjct 294560 ATCATGTTGGTGATTGGGGAACACAATTTGGTATGATAAT 294521 >seq21 Length=88002 Score = 113 bits (124), Expect = 3e-19 Identities = 246/365 (67%), Gaps = 4/365 (1%) Strand=Plus/Plus Query 269142 TCTAGAGTGAGTTTTATCGCCCACCATTTGTTTTAAACGCTGATAATATGTCGGACCAAT 269201 ||||| || | ||||| | ||||| ||||| || | ||||||||| || |||||||| Sbjct 83822 TCTAGCATGTATCTTATCTTCTACCATATGTTTCAATCTCTGATAATAAGTAGGACCAAT 83881 Query 269202 AAATATTTTG-ACATGCATTTTTTCTCCCGTCATACCATTTGT-CATTGTTTCATTTCCC 269259 |||||||||| || | | || || || | || | |||| || | |||||||| Sbjct 83882 AAATATTTTGGACTTTAACATT--CTTCCATTATGTCCATTGTACAAAATATCATTTCCA 83939 Query 269260 CATGCTTCATATCCGTATGAAACTAGTTCATCATTTATTTTATTAATATCTACACCTGTA 269319 || ||||||||| || | || | | ||||| | | | || || | Sbjct 83940 TATTTTTCATATCCTAATTTATGTAATCTCTGCGATATTTCCTGTACAGTTATTTTTGAA 83999 Query 269320 AATGGTGTCGCATCACCATATACTCCTTTAATAGCACATACTTTTCCTAATAGACATTCA 269379 || || || |||||||| | | |||||| ||| || |||||| || || ||||||| Sbjct 84000 AAGGGAGTTGCATCACCTTCTCCTCCTTCAATTGCTGCTACTTTACCAGCTAAACATTCA 84059 Query 269380 ATCAATTGTCCAATGGTCATACGTTTTGGCATACAATTAGGATTAATAATAATATCTGGC 269439 | || |||||||| ||||| || || | || |||||| ||||| ||||| || Sbjct 84060 ACTAAATGTCCAATAGTCATTCGAGAAGGAACTGCATGAGGATTCATAATGATATCAGGG 84119 Query 269440 ACAAGTCCAGATTTAGTAAATGGCATATCTGCTCTATGAATTTTAAATCCAACTGTACCT 269499 | | |||| | |||||||||||||| || | || | ||| ||| | |||||| Sbjct 84120 AAAGTTCCATCACAACTAAATGGCATATCTTCTGTTCGATATGTAATTCCTATAGTACCT 84179 Query 269500 TTTTG 269504 ||||| Sbjct 84180 TTTTG 84184 >seq45 Length=119639 Score = 104 bits (114), Expect = 2e-16 Identities = 106/136 (78%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 753108 TTTAATTCATTATAATTTTCAATGATACCATTATGAACCATAGCTAATTTTTTATTT-TC 753166 |||||||| ||||||||||||| || |||||||| || ||| |||||| ||| || | Sbjct 29204 TTTAATTCTCTATAATTTTCAATTATTCCATTATGTACAATA-CTAATTCTTTCGTTGTA 29146 Query 753167 ATCAGTGTGGGGATGAGCATTTTCCACAGTTTTTTCACCATGTGTTGCCCATCTTGTATG 753226 ||| | || ||||| |||||||| ||||||| |||||||||||||||||||| || Sbjct 29145 ATCCATATGTGGATGCGCATTTTCGTCAGTTTTACATCCATGTGTTGCCCATCTTGTGTG 29086 Query 753227 CCCAACCGCTAAATTA 753242 ||| ||| |||| Sbjct 29085 TGCAATTCCTATATTA 29070 >seq37 Length=214198 Score = 98.7 bits (108), Expect = 6e-15 Identities = 154/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 330944 ATAAAATATGACATGGAGGAAGTGCCATTTTATTAATATCCACTGGATTCCATAAATTAA 331003 ||||||||||||| || || | ||||||||||| | |||| | ||||||| | | Sbjct 55013 ATAAAATATGACAAGGTGGTAATGCCATTTTATCCAGATCCTTTACATTCCATGCACACA 54954 Query 331004 TAATAATTCTTCTATCTGTCGGATTATTTTTAATTGCTTCGATACAtttttttAATTGAT 331063 ||||||||||||| ||| || | |||||| || | ||| ||||||| |||| Sbjct 54953 AAATAATTCTTCTACTTGTTGGTTCATTTTTTATCAAATTTATAATATTTTTTAGCTGAT 54894 Query 331064 CAATTCCTTGCCCGCTGTAATCTTTTTTACA-ATTTTCATATGTTGCACCAAAATATCTC 331122 ||||||||| |||| | | |||| |||| |||| || ||||||| |||| Sbjct 54893 CAATTCCTTTATTTTCATAAT-TATCATACATATTTGTATATTCAGCTCCAAAATGTCTC 54835 Query 331123 ATTTGGAAACCATATCCAGGACCTATATCACCTACATC 331160 ||| |||||||| |||||||| |||| ||| || Sbjct 54834 CATTGAAAACCATAAATAGGACCTAAATCATTTACCTC 54797 >seq11 Length=255151 Score = 95.1 bits (104), Expect = 8e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 482426 TAACTATGCGACAATTTACAGATTTGTGCGTATTATTAGGTTGTGATTATTGTGATAATA 482485 |||||||| |||||| |||||| || | |||| || |||||||||||||||| || Sbjct 193685 TAACTATGAATGAATTTATAGATTTCTGTATTTTATGTGGATGTGATTATTGTGATACTA 193626 Query 482486 TTAAGGGAATTGGCCCAAAAACTGCTTACAATAAAATTAAAGAATGTGGTAGTCTTGAAG 482545 | || || || || ||||||||||||| || ||||||||||| | || || ||||| Sbjct 193625 TAAAAGGTATAGGATCAAAAACTGCTTATAACCTAATTAAAGAATATAGTTGTATTGAAA 193566 Query 482546 AAGTAATTAA 482555 | | ||||| Sbjct 193565 ATATTATTAA 193556 >seq97 Length=165512 Score = 89.7 bits (98), Expect = 3e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 318636 TGTATTAATACCATTATCACCATAAACACATTGAATCAATTTATCATTAGCATTTCTTAC 318695 || || |||||||| || ||||| | | ||||||| | ||| || |||| | ||| Sbjct 15102 TGGATCAATACCATCTTCTCCATATAAAAATTGAATAATGGTATTATCTTCATTCCGTAC 15043 Query 318696 AGTACCATCATATTCCACTTTAATATCTTCTAGTATTTTAACTAATTTTCTTTGTACATA 318755 ||||||||||| | | ||| | ||| | ||||| ||| |||||| | || Sbjct 15042 TGTACCATCATAATGTAAAATAACAGATTCCATACATTTAATTAAGCATCTTTGAATGTA 14983 Query 318756 ACCTGTGTCTGCAGTTTTAATAGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTG 318815 ||| | | ||| ||||| | |||||||| |||| ||||||||| || | |||| || Sbjct 14982 ACCCGATTTTGCTGTTTTTACAGCAGTATCTATAAGACCTTCTCTCCCAGACATACAATG 14923 Query 318816 GAAAAAGAATTCAGCAGGTCCTAAACCTT 318844 ||||| |||| ||| | |||||||| Sbjct 14922 AAAAAAATATTCTTGAGGACGTAAACCTT 14894 >seq2 Length=62077 Score = 87.8 bits (96), Expect = 1e-11 Identities = 205/302 (68%), Gaps = 22/302 (7%) Strand=Plus/Minus Query 895170 TAAAAGATGTTGTCAAATTATGGGTCGAAAAGACGGAGATG--AATTATCTGTTTCTCAA 895227 ||||||||||| |||| ||||| |||| || || || | |||||| || ||||| Sbjct 39407 TAAAAGATGTTTAAAAATAATGGGACGAAGTGAAGGTGAAGATAATTAT-TG-CTCTCAG 39350 Query 895228 ATTATTTATCCTTGCATGCAAGTTGCAGATATTTTTGAACTCGAACCTGAAGGAATAGAT 895287 ||| |||| || || |||||| ||| ||||| ||| ||| || | | ||| Sbjct 39349 ATTCTTTACCCATGTATGCAATGTGCTGATATATTT-------TTCCTAAATG--TCGAT 39299 Query 895288 ATTTGTCAATTAGGTGTTGATCAACGTAAAGTTAATATGCTCGCTCTCGAATA---TGCC 895344 ||||| || |||||| |||||||| | ||||| || ||||| |||| || || || Sbjct 39298 ATTTGCCAGTTAGGTATTGATCAAAGGAAAGTAAACATGCTTGCTCGTGAGTACTGTGAT 39239 Query 895345 AAGAAAAATGGATTAAAAGTACCTGTTATACTATCACACCATATGTTA--ATGG-GATTA 895401 | ||||| || |||| |||| | || |||| || | |||||| | || ||| Sbjct 39238 ATAAAAAAAAGAAAAAAAAAACCTATAATTTTATCTCATGAAATGTTACCAGGGCTTTTA 39179 Query 895402 GGTGGACCTAAAAATAAAATGAGTAAATCCGATCCTAAATCGGCTATATTTATGGAAGAT 895461 | |||| || | |||||| || || ||| || || | || |||||||| ||| Sbjct 39178 GAAGGAC---AAGAAAAAATGTCCAAGTCAGATGAAAATTCTTCCATTTTTATGGATGAT 39122 Query 895462 TC 895463 || Sbjct 39121 TC 39120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268097099253272