Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088485.1_202016 -06-16] 1,914 sequences; 35,654,824 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq35 529 2e-145 seq57 197 2e-45 seq213 156 6e-33 seq112 154 2e-32 seq139 109 7e-19 seq84 89.7 7e-13 >seq35 Length=86519 Score = 529 bits (586), Expect = 2e-145 Identities = 1101/1631 (68%), Gaps = 15/1631 (1%) Strand=Plus/Minus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 ||| |||||||| || | ||||| || || || ||||||||||||||| |||||| Sbjct 64772 AGCCATTGGTATTGACCTTGGAACGACCTATTCCTGTGTTGGTGTATGGAGAAATGAGAA 64713 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 |||||| ||||| | |||||||| || ||| | || || |||||||||||||| ||||| Sbjct 64712 TGTAGATATTATTGCTAATGACCAGGGTAACAGAACTACCCCATCGTACGTTGCTTTTAC 64653 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 |||| || | | |||| ||||| ||||| ||||| |||| || ||| || Sbjct 64652 CGATACGGAGAGATTAATTGGTGATGCTGCAAAGAATCAAGTTGCTAGAAATCCTGAAAA 64593 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 || || ||||| || ||| | | ||||| | || ||| | || ||| || Sbjct 64592 CACAGTTTTTGATGCAAAGAGGTTAATTGGAAGGAAATTTACCGAATCTTCAGTACAGAG 64533 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 ||||| ||| | ||| | | | || | || ||| || || || |||||| | Sbjct 64532 TGATATGAAGCATTGGCCATTTACCGTAAAATCAGGATTGGAAGAGAAACCCATGATTGA 64473 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 ||| | || || ||||| ||| |||| || |||||||| || || ||||| || Sbjct 64472 AGTTACCTACCAAGGAGAGAAAAAATTATTTCACCCAGAAGAAATATCATCCATGGTTTT 64413 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 |||||||| || | ||| ||| | || |||| ||| || | || |||| ||| | Sbjct 64412 ACAAAAGATGAAAGAAAATGCTGAAGCCTTTTTGGGAAAATCTATTAAGAATGCTGTTAT 64353 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 ||||| |||||||| || | |||||| ||| |||| || |||||||| |||| |||| Sbjct 64352 TACTGTCCCTGCTTATTTTAATGATTCTCAAAGACAAGCAACAAAGGATGCTGGAACTAT 64293 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || || | || | | |||||||| || |||||||| || || || ||||||||||| Sbjct 64292 CGCAGGATTGAATGTTATGAGAATTATTAACGAACCAACTGCTGCAGCTATTGCTTATGG 64233 Query 195838 TCTGGACAAGAACAAGGACGAAG--ATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 | | ||| || ||||| | | | ||||| | || || || ||| | || |||||| Sbjct 64232 TTT--ACATAAAAAAGGAAAAGGTGAAAAAAACATTTTAATTTTCGATTTAGGAGGTGGT 64175 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || |||||||| || | | | ||| |||| ||||||||| ||||||||||| ||||| Sbjct 64174 ACCTTTGATGTATCTTTGTTAACTATAGAAGATGGTATATTTGAAGTAAAGGCAACTGCA 64115 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCT-GA 196014 || |||||||| |||| || |||||||| ||| || || | ||||| | || Sbjct 64114 GGAGATACTCACTTAGGAGGAGAAGATTTTGATA-ACAGATTGGTAAACTTTTGTGTAGA 64056 Query 196015 TGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCG 196071 || || |||| |||| || |||||| | || |||| ||| || | | | Sbjct 64055 AGATTTTAAGAGAAAAAATAGAGGAAAAGATTTATCAAAAAATAGTAGAGCATTGAGAAG 63996 Query 196072 GCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGT 196131 | || || |||||| | || ||||| || | ||||| | | ||| ||| | Sbjct 63995 ATTGAGAACCCAATGTGAGAGAGCAAAACGTACGTTGTCTTCATCTACCCAAGCAACTAT 63936 Query 196132 TGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTT 196191 || |||||||| | ||||| || ||||| | | | |||| ||| | | || | || Sbjct 63935 AGAAATTGATTCACTTTTTGAAGGTATTGATTACAGTGTAACTGTTAGCAGAGCTAGATT 63876 Query 196192 TGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCG 196251 ||||||||| ||| | || | | | | || || || |||| | Sbjct 63875 TGAAGAGTTGTGTATTGACTATTTCCGTGATACATTAGTTCCAGTCGAGAAAGTTTTAAA 63816 Query 196252 TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCG 196311 || |||| |||||||||| | || ||||| |||| | || || || ||||| | Sbjct 63815 AGATGCAATGATGGATAAGAAAAGTGTACATGAAGTTGTGTTAGTTGGTGGTTCAACAAG 63756 Query 196312 TATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAAT---AATAAAGATTTAAACAA 196368 ||||| || |||||| || || ||||| ||| || ||| || | Sbjct 63755 AATTCCAAAAATTCAAACATTGATTAAGGAATTCTTTAATGGAAAGGAAGCTTGTAG--- 63699 Query 196369 AACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTC 196428 | | || || || |||||||| |||||||||||||| || ||||| || || ||| | || Sbjct 63698 ATCAATAAATCCTGATGAAGCTGTTGCTTATGGTGCAGCTGTTCAAGCAGCCATTTTATC 63639 Query 196429 AGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCT 196488 ||||| | | |||| || |||||| | || || | ||||| || ||||| | Sbjct 63638 AGGTGATCAATCTAATGCTGTTCAAGATTTACTCCTGTTAGATGTATGTTCCTTATCCTT 63579 Query 196489 GGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCC 196548 ||| | ||||| || |||||||||||||| || | ||||| || || ||||| ||||| Sbjct 63578 AGGTTTAGAAACTGCAGGTGGTGTTATGACCAAGTTAATTGAGAGAAATACAACAATTCC 63519 Query 196549 GACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCA 196608 | || || ||| | ||| | || ||| | ||||||||||||||||| ||||| Sbjct 63518 AGCAAAAAAAAGTCAAATTTTTACTACATATGCTGATAATCAACCAGGTGTATTAATTCA 63459 Query 196609 AGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTT 196668 ||||| ||||||||| | | | || || ||| || | | |||| ||| || | Sbjct 63458 GGTATACGAAGGAGAAAGAGCATTAACTAAAGACAACAATTTGTTAGGAAAATTCCATCT 63399 Query 196669 GACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGA 196728 || |||||| ||||||| ||| || ||||| ||| | ||| |||||||| || Sbjct 63398 AGATGGTATTCCACCTGCACCAAGAAAAGTACCACAAATTGAAGTTACATTCGATATTGA 63339 Query 196729 CGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGAT 196788 |||||||| || |||| || ||||||| ||| || | |||| ||| | | || Sbjct 63338 TGCAAATGGTATATTAAATGTTACAGCTGTGGAAAAATCAACTGGTAAACAAAATCATAT 63279 Query 196789 TGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGA 196848 | ||||||||||| || || | | || || |||||||| ||||||||| | || Sbjct 63278 TACCATTACCAATGATAAAGGTAGATTATCACCAGAAGAAATTGATCGTATGGTTAATGA 63219 Query 196849 TGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATAAATGA 196908 || ||||| |||| | |||||| || | || ||||| || |||||| |||| Sbjct 63218 CGCTGAAAAATACAAAGCAGAAGATGAAGAGAATAAGAAAAGAATTGAAGCTAGAAATAG 63159 Query 196909 TCTAGAAAATT 196919 | |||| |||| Sbjct 63158 TTTAGAGAATT 63148 >seq57 Length=228827 Score = 197 bits (218), Expect = 2e-45 Identities = 461/691 (67%), Gaps = 17/691 (2%) Strand=Plus/Plus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 || ||||||||| | ||||| || ||| || |||||||| | |||| | | ||| Sbjct 68792 ATAGGTATCGATCTGGGAACAACCTACAGCTGCGTTGGTGTGTTCAAAAACGGAAGAGTA 68851 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 || ||| | || || | ||||||||||| || |||||||| || ||||| |||| Sbjct 68852 GAAATTTTGAACAACGAACTAGGAAACCGTATTACCCCATCGTATGTGTCCTTTGTAGAT 68911 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 || | |||||||| || || ||| || | | || |||| | | | || Sbjct 68912 GGAGAGAGAAAGGTTGGAGAGGCAGCCAAATTGGAGGCTACCTTGCACCCCACCCAAACG 68971 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541 || ||||| | || | ||||||||| | |||||| ||| || |||| | ||| Sbjct 68972 GTGTTTGATGTTAAAAGACTTATTGGTAGGAAGTTTGATGATCAGGAAGTTGTAAGGGAT 69031 Query 195542 ATAAAGGAC--TGGT--CTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 | |||| || | | || ||| | || | || | || || | || ||| Sbjct 69032 A----GGACATTGTTACCATACGAAATCGTAAACAATGAAG--GAAAACCAAAT-ATTCG 69084 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || | || | | | | || | ||||| || ||| ||||| | |||||||| Sbjct 69085 AGTCCAGATTAAGGATAAAAATACCACTTTTGCACCAGAACAAATTAGTGCAATGGTGTT 69144 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 |||||||| || | || |||| || |||||||| |||| ||| |||| || || Sbjct 69145 AGAAAAGATGAAAGAAATAGCTCAATCATTTTTGGGTAAACCTGTTAAAAATGCTGTGGT 69204 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || |||||||| || || | |||| ||||| | || || ||||| ||||||| | | || Sbjct 69205 TACAGTACCTGCCTATTTTAATGATGCACAAAGGCAAGCTACAAAAGACGCTGGTACCAT 69264 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 ||| ||| | ||| | | | || || || ||||||||||| ||||| | || || || Sbjct 69265 TGCAGGTTTGAACATTGTACGTATCATTAACGAACCAACAGCTGCTGCTTTGGCATACGG 69324 Query 195838 TCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTAC 195897 | | || || | | ||||| | || | |||| | | |||| | || ||||| || Sbjct 69325 TTTAGATAAAA------AAGAAGAAACAAGTATATTAGTATATGATTTAGGAGGTGGAAC 69378 Query 195898 GTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGG 195957 |||||||| || || | |||||| ||| |||| |||||| | || || ||||| Sbjct 69379 ATTTGATGTATCTATTTTAGTTATTGATAATGGAGTATTTGAAGTATACGCAACAGCTGG 69438 Query 195958 TGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 | |||||||| ||||||| |||||||||||| Sbjct 69439 TAATACTCATTTAGGTGGAGAAGATTTCGAT 69469 Score = 179 bits (198), Expect = 5e-40 Identities = 480/731 (66%), Gaps = 11/731 (2%) Strand=Plus/Plus Query 196190 TTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTT 196249 |||||||| ||||| ||| ||||| ||| | | | ||||| ||| | |||| | Sbjct 69671 TTTGAAGAATTAAATGATGACTTGTTCAGGGAAACTCTAGAACCAGTTAAGAAAGTTTTG 69730 Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309 ||| ||||| || ||| ||| | || |||||||| ||||| || || || || Sbjct 69731 GATGATGCAAAATATGAAAAGAGTAAAATAGACGAAATTGTACTTGTTGGTGGTTCTACA 69790 Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369 ||||| || || |||||||| || | || || || ||||| || | | Sbjct 69791 CGTATACCTAAAATTCAACAAATAATAAAAGATTTTTTTAACGGAAAAGAACCCAATAGA 69850 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 || ||||| |||||||| || || |||||||| || |||| |||| |||| ||| | Sbjct 69851 GGAATTAACCCTGATGAAGCCGTAGCATATGGTGCTGCTATTCAAGCTGGTATTATCTTA 69910 Query 196430 GGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTG 196489 |||| || | | || ||||| || | || | ||||| | ||| || | || Sbjct 69911 GGTG-----AAGAGTTAC----AAGATGTTGTATTATTAGATGTAACTCCCTTAACACTA 69961 Query 196490 GGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCG 196549 ||| | ||||||| |||||| |||||||| || ||||| | || || ||| |||||| Sbjct 69962 GGTATAGAAACAGTTGGTGGTATTATGACTCAACTTATTAAAAGAAATACAGTAATTCCG 70021 Query 196550 ACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAA 196609 || || || |||| ||||| || ||| ||||||||||||| ||| || ||| Sbjct 70022 ACAAAAAAATCACAAACATTTTCCACCTATCAAGATAATCAACCAGCTGTATTAATACAA 70081 Query 196610 GTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTG 196669 |||| |||||| ||| | | | |||||||| ||| | | |||| || || | Sbjct 70082 GTATTTGAAGGGGAAAGAGCATTAACTAAGGATAATCATTTGTTAGGAAAATTTGAACTA 70141 Query 196670 ACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGAC 196729 | || || ||| |||||| |||||||| || | || | || ||| | | || Sbjct 70142 TCTGGCATACCACCTGCACAAAGAGGTGTACCCAAAATAGAAGTAACATTCACTGTTGAT 70201 Query 196730 GCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATT 196789 |||||| || || | || ||| || || || | | || ||| | || ||| Sbjct 70202 AAAAATGGTATATTACATGTAGAAGCAGAAGATAAAGGAACAGGAAAAAGTAAAGGTATT 70261 Query 196790 GTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGAT 196849 ||||| ||||| || || | ||||| || || |||| ||| ||| || | ||| Sbjct 70262 ACCATTACAAATGATAAAGGTAGACTTTCAAAAGAACAAATAGAAAAAATGATTAACGAT 70321 Query 196850 GCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGA-AACAGATGAAAGCTATAAATGA 196908 || ||||| | || ||||| | || ||||| || | | |||||| |||| | Sbjct 70322 GCAGAAAAATTTGCAGATGAAGA-TAAAAATTTGAGAGAAAAAGTAGAAGCTAAAAATAA 70380 Query 196909 TCTAGAAAATT 196919 | |||| |||| Sbjct 70381 TTTAGATAATT 70391 >seq213 Length=18882 Score = 156 bits (172), Expect = 6e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || |||||||||||| | || ||||| || ||||| ||||| || || || ||| Sbjct 1042 ATGCAGATATTTGTGAAAACCTTGACGGGAAAGACCATCACGCTCGATGTAGAATCATCA 983 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || || || ||||||||||||||||| |||||||||||||| Sbjct 982 GACACCATTGAGAATGTAAAGGCGAAAATTCAAGATAAGGAAGGAATTCCACCCGATCAA 923 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | || ||||| || ||||| | || |||||| | || | | ||||| ||| Sbjct 922 CAAAGATTAATATTTGCAGGAAAACAATTAGAGGATGGAAGAACATTATCGGATTATAAC 863 Query 172042 GTTCAAAAGGAGTCTACTCTACAC 172065 | || || || |||||| ||||| Sbjct 862 ATCCAGAAAGAATCTACTTTACAC 839 Score = 152 bits (168), Expect = 7e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || ||||||||| | || ||||| || |||||| | || |||||||| || Sbjct 811 ATGCAGATATTCGTGAAAACCTTAACAGGAAAGACCATCACCTTGGATGTTGAGTCCTCG 752 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | || || || ||||||||||||||||| |||||||||||||| Sbjct 751 GATACGATTGAGAATGTAAAGGCGAAAATTCAAGATAAGGAAGGAATTCCACCCGATCAA 692 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | || ||||| || ||||| | ||||||||| | || | | ||||| ||| Sbjct 691 CAAAGATTAATATTTGCAGGAAAACAATTGGAAGATGGAAGAACATTATCGGATTATAAC 632 Query 172042 GTTCAAAAGGAGTCTACTCTACAC 172065 | || || |||||||| || ||| Sbjct 631 ATCCAGAAAGAGTCTACCCTGCAC 608 Score = 138 bits (152), Expect = 1e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || ||||||||| | || ||||| || |||||| | || || || || || Sbjct 580 ATGCAGATATTCGTGAAAACCTTGACAGGAAAGACCATCACCTTAGATGTAGAATCATCG 521 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | || || || ||||||||||||||||| ||||||||||||||| Sbjct 520 GATACTATTGAGAATGTAAAGGCGAAAATTCAAGATAAGGAAGGAATTCCACCCGATCAG 461 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | || || || || ||||| | || |||||| | || | | ||||| ||| Sbjct 460 CAAAGATTAATATTCGCAGGAAAACAATTAGAGGATGGAAGAACATTATCGGATTATAAC 401 Query 172042 GTTCAAAAGGAGTCTACTCTACAC 172065 | || || || |||||| ||||| Sbjct 400 ATCCAGAAAGAATCTACTTTACAC 377 Score = 111 bits (122), Expect = 2e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 || ||||| |||||| | || |||||||| || || || || || || | || || || Sbjct 1246 GGTAAAACGATCACCTTGGATGTTGAGTCATCGGATACGATTGAGAATGTAAAGGCGAAA 1187 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 ||||| ||||||||||| || ||||| ||||||||| || | || ||||| || || || Sbjct 1186 ATTCAGGATAAGGAAGGAATACCACCTGATCAGCAAAGATTGATATTTGCGGGAAAGCAA 1127 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACA 172064 | |||||||| | || | ||||| ||| | |||||||| ||||| |||| Sbjct 1126 TTGGAAGATGGCAGAACATTATTGGATTATAACATCCAAAAGGAATCTACCTTACA 1071 >seq112 Length=225903 Score = 154 bits (170), Expect = 2e-32 Identities = 668/1048 (64%), Gaps = 9/1048 (1%) Strand=Plus/Plus Query 77940 TCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATA 77999 |||| || | ||| || | || | ||| | || || |||||||| ||| | ||||| Sbjct 220648 TCATAGAAAGACCACAGCATTTGATTATGAGAGTATCAATTGGTATACATTTAGATGATC 220707 Query 78000 TTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCACGCAACA 78058 | | | | | ||||| ||| || ||||| ||| ||| |||| || ||||| Sbjct 220708 TAGAAAAAGCATTAGAAACCTATCATCTGATGTCACAAAAATAT-TTTACACATGCAACG 220766 Query 78059 CCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACT-TGC 78117 || || || |||||| |||| || || | ||||| |||||||||||||| | || || Sbjct 220767 CCAACATTATTTAATTCAGGGACACCAAGACCACAAATGTCATCTTGTTTTTTGCTGTGT 220826 Query 78118 AAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTC 78177 | ||| | || |||||| | || || | | || | | | | |||||| ||| Sbjct 220827 ATGAAAGCA-GATTCTATTGAAGGAATTTTTGAAACATTAAAACAATGTGCTTTGATAAG 220885 Query 78178 TAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGAT 78237 ||| || |||||||| ||| | | || ||| | |||| | | || || || Sbjct 220886 TAAAACTGCAGGTGGTATTGGTGTAGCAGTACAAGATATACGTGGACAGAATTCATATAT 220945 Query 78238 TAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTAC 78297 ||||||||||||||| || | ||| | | || ||| | || || || || | ||| Sbjct 220946 AAGAGGAACTAATGGTATTTCAAACGGATTAGTACCAATGTTAAGAGTTTTTAACGATAC 221005 Query 78298 AGCACGCTATGTCAACCAAGCGGGTCG---TAGGAAGGGGTCATTCGCTATGTACCTTGA 78354 ||| | ||||| | |||| || | || || || ||||| || | || |||| Sbjct 221006 AGCTAGATATGTAGATCAAGGTGGAGGAAAAAGAAAAGGATCATTTGCAGTATATATTGA 221065 Query 78355 ACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGA 78414 ||| ||||| | || || | || ||| | || | | || || ||| | || || Sbjct 221066 ACCATGGCATTCAGACATATTTGAATTTCTAGATTTGAGAAAAAATCATGGTAAAGAAGA 221125 Query 78415 AGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGT 78474 | || || |||||||| |||| | ||| |||| ||| | |||||||| ||||| Sbjct 221126 ATTAAGAGCTAGAGATTTATTTTATGCTGTTTGGGTTCCAGATTTATTTATGAAAAGAGT 221185 Query 78475 TGAGGAAGGAGGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGT 78534 | ||||| || ||| || | | |||||| || | | ||| | || Sbjct 221186 TAAGGAAAATAAAAATTGGACTTTAATGTGTCCAAATGAATGTCCAGGTTTGAGTGAAAC 221245 Query 78535 ATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAA 78594 || || |||||||| |||||||| || || || ||||| ||| | | | | || Sbjct 221246 ATGGGGTGAAGAATTTGAAAAATTATATGAAAAGTATGAAGAAGAAAATTTAGGAAAAAA 221305 Query 78595 GACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCAC 78654 || | || || ||||| |||||| | ||||||| | || || || Sbjct 221306 AACTGTATTAGCTCAAGATTTATGGTTTGCTATTTTACAAAGTCAGATTGAAACAGGTGT 221365 Query 78655 CCCGTATATGCTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGT 78714 || || ||| | |||||||| ||||| || ||||| ||||| || ||||| Sbjct 221366 ACCATACATGTTGTACAAAGATTCATGTAATGCTAAATCTAATCAAAAAAATTTAGGTAC 221425 Query 78715 CATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACAC-GGATAAGAATGAAACAG 78773 || ||| | ||| || ||| ||||| | ||||| || | || ||||| | Sbjct 221426 AATTAAATGTAGTAATCTATGCTGTGAAATAATAGAATATACATCACCAG-ATGAAGTTG 221484 Query 78774 CTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACAT 78833 |||| ||||| ||| ||||| ||| || || ||||| || |||| ||| | Sbjct 221485 CTGTTTGTAACTTAGCATCTATTGCTTTATGTAAATTTGTAGACACAGAAAAAAAAGTTT 221544 Query 78834 TTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAA 78893 || ||| | ||| | | |||||||||||||| | || | ||||||| | | | Sbjct 221545 TTAATTTTAAAAAATTATATGAAATTACAAAAATTATTACGAGAAATTTAGACAAAATTA 221604 Query 78894 TTGACCGTAACTACTACCCAGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAA 78953 |||| | || || || || || || ||| | || || | || ||||||||||| Sbjct 221605 TTGAAAGAAATTATTATCCTGTTAAGGAAGCTGAGAGATCAAACAGGAGACATAGACCAA 221664 Query 78954 TTGGTCTAGGTGTTCAAGGATTGGCAGA 78981 | || | ||||| |||||||| || || Sbjct 221665 TAGGAATTGGTGTACAAGGATTAGCTGA 221692 >seq139 Length=234430 Score = 109 bits (120), Expect = 7e-19 Identities = 538/844 (64%), Gaps = 22/844 (3%) Strand=Plus/Minus Query 60175 TAATCACCAACCCGCTTTTCAAAGAAGTTTGTTTTACCATCCAACGAAATATTTTCCATA 60234 |||||| |||| || |||||||| ||||||||||| || | | ||||| ||||| Sbjct 200094 TAATCAGCAACACGTTTTTCAAAAAAGTTTGTTTTTCCTTGTAGAGAAATTAAATCCATC 200035 Query 60235 AAATCAAAGGGGTTCTTTGAATTCCAAATCGTTGGGTGTCCAACTTGTTTTAAAAGACGG 60294 ||| ||| || || |||| | |||| ||| || | || ||| | || Sbjct 200034 CAATTAAAAGGATTTTTTGCAAAAAAAATTTTTGAACAACCTAAACATTCTAATAATCGA 199975 Query 60295 TCAGACACGTATTCAATGTATTCCGACATCTTTTCGGAATTCATTCCTATGAGACTACAT 60354 || | || ||||||| || | ||||| | |||||||| || || | ||| Sbjct 199974 TCTGCTACAAATTCAATATACTGAGACATTAATCTTGAATTCATCCCAATTAAGTCACAA 199915 Query 60355 GGGAGTGCATCTAAAATAAAACCCTTTTCAATCTCAACAGCTTCTTTTATAATCGTATGA 60414 || || | || | || ||| | |||||| |||||||||||||||| ||| | | | Sbjct 199914 GGTAGAGATTCACATATGAAAGACCTTTCAACTTCAACAGCTTCTTTTACAATATTTTTA 199855 Query 60415 ATAATATCCTTTGAAGGTTTTTGTTGAAGCATATTAAATAATTCAACTG-CAAATTCTTG 60473 | || || | || |||| | || | | | || || ||| || | ||| ||| Sbjct 199854 ACAACTTCTTCTGGTAGTTTATTTTCTAATAAACTATAT-ATTAGACAGTTAAAATCTGT 199796 Query 60474 ATGAAGACCTTCGTCACGACTAATAAGTTCATTACTGAAACAAAGTCCGGGAAGTAGACC 60533 ||| | ||||| || | |||||| |||||||| || || |||||| | | | Sbjct 199795 ATGTAATCCTTCATCTCTACTAATTAGTTCATTGCTAAAGGTAAGTCCATGTAATTTGTT 199736 Query 60534 CCGCTTCTTTAACCAATATACAGCACAGAACGAACCACTGAAAAAGATACCCTCTACACA 60593 | || || |||||| | | ||||||||| |||||| || | ||||| || ||||| Sbjct 199735 TTGTTTTTTAAACCAAAAAATAGCACAGAAACTACCACTAAACAGTATACCTTCAACACA 199676 Query 60594 CGCAAACGCAAAAAGACGTTCAGCAAATGGTCTAGATTTGTCAAACCATTTCATGGCCCA 60653 ||| || | || | ||| ||||||| | | | | | |||||| ||||| Sbjct 199675 TGCATTTGCTACAATTCTTTCTGCAAATGAATTTGTATCATTTATCCATTTTGCTGCCCA 199616 Query 60654 TTCAGCCTT-TCGTTCGATACAAGGGATTGTTTGAATAGCTTGAAATAATTGT-----TT 60707 || || | || | | || || ||| |||||| |||||||| | | || Sbjct 199615 AAGTGCTTTATTCTTAACTGC-TGGTATATTTTCAATAGCATGAAATAAATTTAAACGTT 199557 Query 60708 CTTTTCCGAAGGGTCTTTGATATATTTGTCGATTAATTTACTATATGTTTCACCGTGAAC 60767 ||||| | ||||| ||||| ||||| || | | |||||||||||| || | Sbjct 199556 CTTTTTC-----ATCTTTTATATAATTGTCTATAAGTAAACTATATGTTTCTGAATGTAT 199502 Query 60768 CATTT-CGTTGTGACACTGATAACCATAAAAAGAACGAGCTTCGGAGGCTTGTACTTCAT 60826 ||| | || | ||| | ||||| |||||| | ||| || || | Sbjct 199501 ATTTTCCACTGCTA-TTTGAAATGAGTAAAATTTTTTAGCTTCTGTAATTTGAACCTC-T 199444 Query 60827 CTGCAAAA-TTATTGTTAATGTTTTCAAAAACAATTCCATCCGACCCAGCGAAGAATGCG 60885 || |||| ||| || | ||||| || || || ||||| | || || ||||| Sbjct 199443 CTTAAAAATTTACTGGCCAAATTTTCTAATACTATACCATCACTAGCTGCAAAAAATGCT 199384 Query 60886 AGTATGTATTTTATGAACTTCTGTTCGTTATCCGTTAATTGTACCCAATCTTCCATATCT 60945 | || | ||| || || | || ||| || || |||||| | | |||||| | ||| Sbjct 199383 AATACATGTTTAATAAAATGCTTTTCATTCTCATTTAATTTTTCAAAATCTTTTAAATCA 199324 Query 60946 TTTGATAAATCAATTTCTTCTGCCGTCC--AATTAGACATCTGGGCCTTCTTGTAAAGAT 61003 |||||||||| |||||||| || |||| ||| | | ||| || || || |||| || Sbjct 199323 CTTGATAAATCTATTTCTTCAGCTGTCCAAAATGATGCTTCT--GCTTTTTTATAAAAAT 199266 Query 61004 CCCA 61007 |||| Sbjct 199265 CCCA 199262 >seq84 Length=401228 Score = 89.7 bits (98), Expect = 7e-13 Identities = 224/333 (67%), Gaps = 18/333 (5%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 || ||||| || ||||| ||| || | || | || || | | || ||| | ||| Sbjct 159685 AAAATGAAAGAAACTGCTGAAAATTATTTAGGAAGAAAAGTACACCAAGCTGTTATTACT 159744 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| || || | |||||||| |||| || ||||| || || | ||||| Sbjct 159745 GTTCCTGCATATTTTAACGATTCACAGAGACAAGCAACAAAAGATGCAGGAAAAATTGCA 159804 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || | ||| |||||||| || ||||||||||| ||||| | || | ||| || Sbjct 159805 GGATTAGATGTTCTAAGAATTATTAACGAACCAACAGCAGCTGCGTTAGCCTTTGGATTG 159864 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGT-ATTG--ATCTTTGATCTCGGTGGTGGTACG 195898 || || ||| ||| ||| || |||| | | |||| | || || ||||| Sbjct 159865 GA----AAAAAG-----TGATGGAAAAGTAATTGCAGTATATGATTTGGGAGGAGGTACA 159915 Query 195899 TTTGATGTCTCACTTCT--CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 |||||| | || || | |||||| ||| ||| | || ||||| || || || || Sbjct 159916 TTTGATATATCTATTTTGGAAATATT--AGGAGGTGTTTTTGAAGTGAAAGCAACAAATG 159973 Query 195957 GTGATAC-TCATCTAGGTGGTGAAGATTTCGAT 195988 || |||| ||| || ||||| |||||||| ||| Sbjct 159974 GTAATACATCA-CTTGGTGGAGAAGATTTTGAT 160005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657846660642080