Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088485.1_202016 -06-16] 1,914 sequences; 35,654,824 total letters Query= NC_022069.1 Length=55213 Score E Sequences producing significant alignments: (Bits) Value seq361 132 2e-26 >seq361 Length=549 Score = 132 bits (146), Expect = 2e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 3616 CAGTTCCCCGCCGCGTCACCGGATGCGCATTGGTCTGACATCAATGGGTTGGCGAAACTG 3675 ||| ||||||| |||| || | ||||| | | || |||| | |||||| ||| Sbjct 496 CAGATCCCCGCGTCGTCGCCCCAGCCGCATCTGGCGAACCTCAACGCCCAGGCGAAGCTG 437 Query 3676 TTCGCCCGTGAGGCGTCGCTTCCGGATACGGCGGTGGCGATTTCTGGGTTGTCGAATCCG 3735 | |||||| ||| ||| ||||| || |||||| | ||||| | | | |||||||| Sbjct 436 TGCGCCCGCGAGATGTCACTTCCCGACACGGCGCTCGCGATCACCGACGTCTCGAATCCA 377 Query 3736 ACGTCGGCTGAGTCGTATGACGCTTCGCAGTACGAGCTGATCGCTGAGGCTGAAGGCGCG 3795 |||||||| ||||| || ||||| |||||||||||||| ||||| ||||| || |||| | Sbjct 376 ACGTCGGCCGAGTCCTACGACGCCTCGCAGTACGAGCTCATCGCCGAGGCGGAGGGCGTG 317 Query 3796 GTGGATGATTTCACGCCGGCGCTGCGGAAGGCGTTCATTCGTGCTTTGGCGAT 3848 ||||||| | || | | |||||| ||||| |||||| | ||||| Sbjct 316 CTGGATGACGCCGCGACTCCACTGCGGCGCTCGTTCGCTCGTGCCCTCGCGAT 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 176555987011900