Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088485.1_202016 -06-16] 1,914 sequences; 35,654,824 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq135 120 1e-22 >seq135 Length=348065 Score = 120 bits (132), Expect = 1e-22 Identities = 286/420 (68%), Gaps = 23/420 (5%) Strand=Plus/Minus Query 64970 CCATCATCATCCAAATACTTCAAAATGGCATCATC---CTCTTTTGGAAATATAGAACGA 65026 || || |||| ||||||||||| || | |||||| ||| || ||||||| | | Sbjct 341619 CCTTCTTCATTTAAATACTTCAATATAGGATCATCATACTCATT---AAATATACTTCTA 341563 Query 65027 GTTATTTTATTCAATTGAGTATAAATATATCTTTCGG---ATGCGTGGTCTTGTCCAG-T 65082 ||| || |||| ||| | ||||||||| | | |||| | ||| |||| | Sbjct 341562 GTTGAGCTAGCTAATTTTGTAAATATATATCTTGCTGCAGATGCAT---CTTTTCCACCT 341506 Query 65083 TCGT--CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATA 65140 || | | ||||||| || ||| |||| ||| |||||||||||||| ||||| | | Sbjct 341505 TCTTTTCTACTTCCAAATTGTCCACATGGCTCTAAAAAATTAATATTGTTAGAACCTACA 341446 Query 65141 AAATTCTGAGCCATTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATCC 65199 || | || ||||| ||||||| ||| | || | | ||| || ||||||||| | Sbjct 341445 AATGTTTGTGCCATATTAATAATTGTCTG-TTGTAGAGATGATTCTCCATGATGATATGC 341387 Query 65200 TGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAA-TTCT 65258 |||||||| | || ||| |||||||||||||| ||| || ||||| ||| Sbjct 341386 ACTATGTTCAGCAATGTAACCAACTAATTGAGCAACTTTACATTCATTTTTTAAATTTCG 341327 Query 65259 TTTTAAA-TGCAGAATACAA-TATTTTCCGTAAACTAATTTTCAATCCATCCATTAAATT 65316 ||| ||| | | ||| || | || || || | | |||| |||| ||||||| ||| Sbjct 341326 TTTGAAACATCCGTATAAAACTTTTCTCTGT---CCAGGTTTCCATCCGTCCATTATATT 341270 Query 65317 AGGAATGCTTCTGTCACAATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATTC 65376 || || ||||| || ||||||| | || | | ||| |||||||| || | ||| || Sbjct 341269 TGGTATACTTCTTTCCGTATCATATCTAGAATAGTATATCAATTCTTTATTCACAAAATC 341210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235674502322100