Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088485.1_202016 -06-16] 1,914 sequences; 35,654,824 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq213 111 4e-19 >seq213 Length=18882 Score = 111 bits (122), Expect = 4e-19 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 |||||| ||||| |||||||| ||||| | ||| ||||| ||||| |||| ||| || Sbjct 845 AGTAGATTCTTTCTGGATGTTATAATCCGATAATGTTCTTCCATCCTCTAATTGTTTTCC 904 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 || || || | || || || || | | ||||||||||| ||||||||||| || Sbjct 905 TGCAAATATTAATCTTTGTTGATCGGGTGGAATTCCTTCCTTATCTTGAATTTTCGCCTT 964 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| |||| | | ||||||| ||||| || || || || || || ||||| | || Sbjct 965 TACATTCTCAATGGTGTCTGATGATTCTACATCGAGCGTGATGGTCTTTCCCGTCAAGGT 1024 Query 152087 CTTCACGAAGACCTGCATT 152105 ||||| || | ||||||| Sbjct 1025 TTTCACAAATATCTGCATT 1043 Score = 102 bits (112), Expect = 2e-16 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 |||||| ||||| |||||||| ||||| | ||| ||||| ||||| |||| ||| || Sbjct 383 AGTAGATTCTTTCTGGATGTTATAATCCGATAATGTTCTTCCATCCTCTAATTGTTTTCC 442 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 ||||| || | || ||||| || | | ||||||||||| ||||||||||| || Sbjct 443 TGCGAATATTAATCTTTGCTGATCGGGTGGAATTCCTTCCTTATCTTGAATTTTCGCCTT 502 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| |||| | | || || ||||| || | || || || || || || | || Sbjct 503 TACATTCTCAATAGTATCCGATGATTCTACATCTAAGGTGATGGTCTTTCCTGTCAAGGT 562 Query 152087 CTTCACGAAGACCTGCATT 152105 |||||||| | ||||||| Sbjct 563 TTTCACGAATATCTGCATT 581 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || || ||||||||||| |||||||| ||||| | ||| ||||| |||||||| | | Sbjct 609 TGCAGGGTAGACTCTTTCTGGATGTTATAATCCGATAATGTTCTTCCATCTTCCAATTGT 668 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || || | || || || || | | ||||||||||| ||||||||||| Sbjct 669 TTTCCTGCAAATATTAATCTTTGTTGATCGGGTGGAATTCCTTCCTTATCTTGAATTTTC 728 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || ||| |||| | | || || ||| || || | || || || || || || Sbjct 729 GCCTTTACATTCTCAATCGTATCCGAGGACTCAACATCCAAGGTGATGGTCTTTCCTGTT 788 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 | || |||||||| | ||||||| Sbjct 789 AAGGTTTTCACGAATATCTGCATT 812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153792504708294