Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016 -06-16] 3,484 sequences; 36,406,953 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq176 87.8 2e-12 >seq176 Length=118070 Score = 87.8 bits (96), Expect = 2e-12 Identities = 172/249 (69%), Gaps = 4/249 (2%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GC 118569 |||||| | ||||| || || ||||| | ||||| ||||| || ||||| ||||| | Sbjct 109900 ACCTCCTCTTAATCGTAAGACTAAGTGTAAAGTAGATTCTTTCTGGATGTTATAATCCGA 109841 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || || | |||||| | |||||||| ||| | || | | ||||||||||| | Sbjct 109840 TAAT-GTTCTTCCATCCTCTAATTGTTTTCCTGCGAATATTAATCTTTGCTGATCGGGTG 109782 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688 | || || ||||| ||| |||||| || || | || | || |||| || | || Sbjct 109781 GAATTCCTTCCTTATCTTGAATTTTCGCCTTTACATTCTCAATAGTATCCGATGAT-TCT 109723 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTATTCT 118748 || || | ||| | || || || |||| ||||| || || |||||||| || | || Sbjct 109722 ACATCTAAGGTGATGGTCTTTCCTGTCAAGGTTTTCACGAATATCTGCATTCCTCCTCCT 109663 Query 118749 ATTACTCGT 118757 ||| |||| Sbjct 109662 CTTAATCGT 109654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433811979018928