Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016 -06-16] 3,484 sequences; 36,406,953 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq191 109 9e-19 >seq191 Length=349727 Score = 109 bits (120), Expect = 9e-19 Identities = 175/247 (71%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 193946 TGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGAT 194005 ||| ||| | || || || ||| ||||||||||||||| || || || || ||||| Sbjct 284701 TGGCATTTTATTTAACCATGAAAGTCCAAGAAGAGGTGAAACCTTCGTTACCAAAAAGAT 284642 Query 194006 TACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATC--TTGGTAAT 194063 || ||| ||| | | | ||| |||| || | | || | |||||||| Sbjct 284641 AACT--AGGGCTATTGCAAACATATGTAAACATACACAATGTGTTCTAACCCTTGGTAAT 284584 Query 194064 CTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATG 194123 || || || | || || |||||||| ||||| |||||||| |||| |||| |||||| Sbjct 284583 ATTGATACTTATAGAGACTGGGGACATGCAAAAGATTATGTACAAGCAATGTACTTAATG 284524 Query 194124 TTGCAACAGGATGAACCCGATGATTATGTGAT-TGCTACAGGTGAACAGTATTCTGTTAG 194182 || |||||| |||||||| ||| ||| || |||| || |||||| |||||||||| Sbjct 284523 TTACAACAGAATGAACCCATAGATCTTGTCATATGCT-CAAATGAACAACATTCTGTTAG 284465 Query 194183 AGACTTT 194189 ||| ||| Sbjct 284464 AGAGTTT 284458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807520030971040