Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016 -06-16] 3,484 sequences; 36,406,953 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq176 95.1 3e-14 >seq176 Length=118070 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 199420 GACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTC 199479 ||| | ||| | ||| || || || |||| ||| || || | || || |||||||| || Sbjct 109420 GACTAAGTGTAAAGTAGATTCTTTCTGGATGTTATAATCCGATAATGTTCTTCCATCCTC 109361 Query 199480 CAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTG 199539 | || ||||| || || || | | || || || || ||||||||| || || Sbjct 109360 TAATTGTTTTCCTGCAAATATTAATCTTTGTTGATCGGGTGGAATTCCTTCCTTATCTTG 109301 Query 199540 AATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTT 199599 ||| || ||| || || | |||||||| || ||||||||| | |||||| ||||| Sbjct 109300 AATTTTCGCCTTTACATTCTCAATGGTGTCTGATGATTCTACATCGAGCGTGATGGTCTT 109241 Query 199600 ACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| | ||||||||||| || || Sbjct 109240 TCCCGTCAAGGTTTTCACAAATATCTG 109214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178868974413428