Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016 -06-16] 3,484 sequences; 36,406,953 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq41 610 5e-169 seq68 351 7e-91 seq113 210 2e-48 seq177 163 2e-34 seq29 140 2e-27 seq158 87.8 1e-11 seq201 86.0 5e-11 >seq41 Length=273930 Score = 610 bits (676), Expect = 5e-169 Identities = 1127/1624 (69%), Gaps = 64/1624 (4%) Strand=Plus/Plus Query 517130 TTTTTCTTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGA 517189 || |||| | |||| || ||| ||| || ||| || ||| ||| | ||||||| Sbjct 234401 TTATTCTCTTCATCTTCTGCTTTGTATTTTTCAGCGTCATTAACCATACGATCAATTTCT 234460 Query 517190 TCTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTT----GT 517245 ||| || ||||| || || ||| ||||| ||||||| || |||||| || Sbjct 234461 TCTGGTGATAATCTACCTTTATCATTGGTAATGGTAATATGATT----TTGTTTACCAGT 234516 Query 517246 TGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTC 517305 |||||| || | || || ||||| | |||||||| ||||| | ||| ||||| ||||| Sbjct 234517 TGATTTTTCCACAGCTGTAACATTTAATATACCATTTGCATCAATATCGAATGTAACTTC 234576 Query 517306 AATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATT 517365 |||||| || || ||| | |||||||| || || || | || ||| |||| | Sbjct 234577 AATTTGTGGTACTTTTCTTGGTGCAGGTGGAATACCATCTAGATGGAATTTTCCTAACAA 234636 Query 517366 ATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACA---GT 517422 ||| || |||||||| ||| || ||| || ||| | | || || ||| |||| | Sbjct 234637 ATTGTTGTCTTTAGTTAATGCTCTTTCTCCTTCGTATACCTGAAT--TAA-TACACCTGG 234693 Query 517423 TTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT 517482 ||||||||| | ||| || ||||| | | |||||| ||||||||||| ||||| Sbjct 234694 TTGATTATCAGCATATGTAGTAAAAATTTGACTTTTTTTTGCTGGAATTGTTGTATTTCT 234753 Query 517483 ATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 517542 ||||| | |||||||||| ||||||||| ||||||||||| | || | | | || Sbjct 234754 CTCAATTAACTTGGTCATAACACCACCTGCAGTTTCTAAACCTAAGGATAAGGAACATAC 234813 Query 517543 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACA---AGAATAGCTGC 517599 ||| | |||| | || ||||| ||| || |||| || | | ||| ||||| Sbjct 234814 ATCTAACAGGAGTAAATCTTGAACAG---CATTAGATTGATCACCTGATAAAATGGCTGC 234870 Query 517600 TTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAG----TT 517655 ||||| ||| |||||||| |||||||||||||||||||| | || || || || Sbjct 234871 TTGAACAGCTGCACCATAAGCAACAGCTTCATCAGGATTTA----TTGATCTACAAGCTT 234926 Query 517656 TTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTACCTTA-GGAATACGAGATGATC 517712 || ||||| ||| |||| | || || ||| | | || ||||| | | ||| | Sbjct 234927 CCTTTCCATT-AAAGAATTCCTTAATCAA--TGTTTGAATTTTTGGAATTCTTGTTGAAC 234983 Query 517713 CTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTT 517772 | |||||||| |||| |||||| || | ||||||| ||| ||| |||||||| Sbjct 234984 CACCAACTAACACAACTTCATGTACACTTTTCTTATCCATCATTGCATCTTTTAAAACTT 235043 Query 517773 TTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTC 517832 | || || || | | | | || |||| ||| | ||||| ||| |||||| Sbjct 235044 TCTCGACTGGAACTAATGTATCACGGAAATAGTCAATACACAACTCTTCAAATCTAGCTC 235103 Query 517833 TAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTT 517892 | ||| ||| ||| | |||||||| ||||| || | ||||||| ||| || || | || Sbjct 235104 TGCTAACAGTTACACTGTAATCAATACCTTCAAAAAGTGAATCAATTTCTATAGTTGCTT 235163 Query 517893 GAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG 517952 | || || ||||| | | |||||| || | |||||| || || | ||||| || | Sbjct 235164 GGGTAGATGAAGACAACGTACGTTTTGCTCTCTCACATTGGGTTCTCAATCTTCTCAATG 235223 Query 517953 CTTT--TGCTGATTGATTCAAATCTGTTT---TATATTTTCTCTTGAAATCTTCAACACA 518007 || | | | ||||| |||||| || ||| ||||||||| |||||||| ||||| Sbjct 235224 CTCTACTATTTTTTGAT--AAATCTTTTCCTCTATTTTTTCTCTTAAAATCTTCTACACA 235281 Query 518008 CCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGC 518067 | |||| | | |||||||||||||| ||||| || | ||||| ||||| || || Sbjct 235282 AAAGTTTACCAATCTGTTATCAAAATCTTCTCCTCCTAAGTGAGTATCTCCTGCAGTTGC 235341 Query 518068 TCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACC 518127 |||||| || | |||||||| | || || | || ||||||| ||| ||||| || Sbjct 235342 CTTTACTTCAAATATACCATCTTCTATAGTTAACAAAGATACATCAAAGGTACCACCTCC 235401 Query 518128 CATATCAAAAATAAGTACATTCATTTCT--TTGTCTTGGTTTTTATCAAGACCATACGCA 518185 | ||| ||||| | | || |||| || || | ||||||| | |||||| ||| Sbjct 235402 TAAATCGAAAATTAAAATGTTTTTTTCACCTTTTCCT--TTTTTATGTAAACCATAAGCA 235459 Query 518186 AAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCT 518245 | ||| |||||||||||||| ||||||||||||| |||||| | || || || |||| Sbjct 235460 ATAGCTGCAGCAGTTGGTTCGTTAATAATTCTCATAACATTCAATCCTGCGATAGTTCCA 235519 Query 518246 GCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCA 518305 ||||| || || ||||||||||| ||||| |||||||| ||||| ||||||||||| ||| Sbjct 235520 GCATCCTTTGTTGCTTGTCTTTGAGAATCATTAAAATAAGCAGGGACAGTAATAACAGCA 235579 Query 518306 TCAGTTACTTCTTTACCAATATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCA 518363 | | | ||| || | | ||| |||| || ||| |||||| || ||||| || Sbjct 235580 TTCTTAATAGATTTTCCCA-AAAAG-GCTTCAGCATTTTCTTTCATCTTTTGTAAAACCA 235637 Query 518364 TTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAAT 518423 | ||||| |||| ||||||| | || || || ||| || | ||||||| Sbjct 235638 TGGATGATATTTCTTCTGGGTGAAATAATTTTTTCTCTCCTTGGTAGGTAACTTCAATCA 235697 Query 518424 ATGGTTTAT-TACCAA-CATTA-ATAACTTTAAATGGCCAGTATTTCATA----TCTG-A 518475 ||||| | | |||| | | | | || |||||||||| | |||||| |||| | Sbjct 235698 TGGGTTTCTCTTCCAATCCTGATTTTACGGTAAATGGCCAATGCTTCATATCACTCTGTA 235757 Query 518476 TTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATT 518535 |||| | || || |||| | || |||||||| | ||||||||||||| || || Sbjct 235758 CTGAAGA-TTCGG----TAAATTTCCTTCCAATTAACCTCTTTGCATCAAAAACTGTGTT 235812 Query 518536 GGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT-TCTGTCTCTG 518594 ||||| | ||| |||||| || || ||||| ||||| | || | || || || | Sbjct 235813 TTCAGGATTTCTAGCAACTTGATTCTTTGCAGCATCACCAATTA-ATCTCTCCGTATCGG 235871 Query 518595 TAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTT 518654 |||| | ||| || ||||| || || | ||||| || ||||| |||||||| || || | Sbjct 235872 TAAAAGCAACGTACGATGGGGTAGTTCTGTTACCCTGGTCATTAGCAATAATATCTACAT 235931 Query 518655 TACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCAA 518714 | ||||| ||||||||| ||||| | | || ||||| | ||||||||||| || | Sbjct 235932 TCTCATTTCTCCATACACCAACACAGGAATAGGTCGTTCCAAGGTCAATACCAATGGCTA 235991 Query 518715 TTTT 518718 | || Sbjct 235992 TATT 235995 Score = 120 bits (132), Expect = 2e-21 Identities = 210/306 (69%), Gaps = 15/306 (5%) Strand=Plus/Plus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTAATGTTCTAAATACTCCA 322144 ||||||||||||||||| || || |||| || | ||| | | ||||| ||| Sbjct 235301 TCAAAATCTTCTCCTCCTAAGTGAGTATCTCCTGCAGTTGCCTTTACTTCAAATATACCA 235360 Query 322145 TTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTACG 322204 | | ||| | | || || ||||| || || ||| ||||||| || ||| | | | Sbjct 235361 TCTTCTATAGTTAACAAAGATACATCAAAGGTACCACCTCCTAAATCGAAAATTAAAATG 235420 Query 322205 TTACCACCAGtttttttA---TTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCT 322261 || ||||| | || | ||||| | | ||||| || |||| |||||| Sbjct 235421 TT---------TTTTTCACCTTTTCCTTTTTTATGT---AAACCATAAGCAATAGCTGCA 235468 Query 322262 GCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGA 322321 ||||||||||| ||||| ||| | | ||||| || || || || | ||| ||| Sbjct 235469 GCAGTTGGTTCGTTAATAATTCTCATAACATTCAATCCTGCGATAGTTCCAGCATCCTTT 235528 Query 322322 GTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATA 322381 ||||||||||| || | ||||||||||| || || ||||||||||| || || |||||| Sbjct 235529 GTTGCTTGTCTTTGAGAATCATTAAAATAAGCAGGGACAGTAATAACAGCATTCTTAATA 235588 Query 322382 GGTTTT 322387 | |||| Sbjct 235589 GATTTT 235594 >seq68 Length=204961 Score = 351 bits (388), Expect = 7e-91 Identities = 1068/1632 (65%), Gaps = 45/1632 (3%) Strand=Plus/Minus Query 517093 ATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTC 517152 |||||| ||||| | |||||||| || || || | || |||||| | ||| | Sbjct 46616 ATAATTATCTAAATTATTTTTAGCTTCTACTTTTTCTCTCAAATTTTTATCTTCATCTGC 46557 Query 517153 AAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT 517212 ||||| || || || |||||||| | || ||||| |||| || | ||| || || Sbjct 46556 AAATTTTTCTGCATCGTTAATCATTTTTTCTATTTGTTCTTTTGAAAGTCTACCTTTATC 46497 Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 517272 ||| ||||| |||||| || ||| |||| |||||| | || |||| | Sbjct 46496 ATTTGTAATGGTAATACCTTTACTTTTTCCTGTTCCTTTATCTTCTGCTTCTACATGTAA 46437 Query 517273 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 517332 |||||||| ||| | | ||||| ||||| |||| || || ||||| || ||||| Sbjct 46436 TATACCATTTTTATCAACAGTGAATGTTACTTCTATTTTGGGTACACCTCTTTGTGCAGG 46377 Query 517333 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 517392 ||| || || | | |||| |||| | || |||||| ||||| ||| || ||| Sbjct 46376 TGGTATGCCAGATAGTTCAAATTTTCCTAACAAATGATTATCCTTAGTTAATGCTCTTTC 46317 Query 517393 ACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAATAAGTTGTAAATAC 517449 || || || | ||| || ||| ||||| | ||||||||| ||| || | |||| Sbjct 46316 CCCTTCAAATACTTGTAT--TAA-TACAGCTGGTTGATTATCTTGATAGGTGGAAAATGT 46260 Query 517450 TCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 517509 | |||||||| |||||| ||| ||||| | ||||| | |||||||||||||| Sbjct 46259 TTGTGATTTTTTTGTCGGAATTACTGTATTTCTTTTAATAAGTTGAGTCATAATACCACC 46200 Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 517569 ||||||||| ||| || | | ||||| ||||| | || |||| || ||| | | Sbjct 46199 AACTGTTTCTATACCTAGTGTTAAGGGAGTTACATCTAATAATACAACATCTTGTAACTC 46140 Query 517570 TTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 517629 ||| ||| | | |||| | ||||||||||||||||||||||| || ||||| Sbjct 46139 TTC---------ACCTAAGATAATACCAGCTTGAATAGCAGCACCATATGCTACGGCTTC 46089 Query 517630 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 517689 |||||| |||| | ||| ||| ||| || || ||||||| | | | |||| Sbjct 46088 ATCAGGGTTAATTCCTCTATTGGGTTCTTTTCCGTTAAAAAAATCTTTTATTATTTGTTG 46029 Query 517690 TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 517749 | ||||| ||||| | || || ||||| | ||||||||| | | | || || Sbjct 46028 AATTTTAGGTATACGTGTAGAACCACCAACAAGTACAATTTCGTCTATTTTACTCTTTTC 45969 Query 517750 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGA 517809 ||||| ||| |||||||| | ||| ||||| ||| | || |||||||| Sbjct 45968 ATATTTTGCATCATCCAAAACTTTCTTAACTGGTTCTAGAGTTTCCCTGAACAAGTCATC 45909 Query 517810 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT-TCCTTCGAACA 517868 | | |||||| ||||| ||||| || | || | | | || | | ||||| | | Sbjct 45908 ATTTAATTCTTCAAATTTTGCTCTTGTTAATGTTTC-TGAAAAGCTGTGACCTTCTACAA 45850 Query 517869 AAGAATCAACTTCAATCGTAGTTTGAGTCGA-AGAAGATAGTGCACGTTTAGCACGTTCA 517927 | |||| |||||| | | |||||| | | ||||| | ||| ||| ||| Sbjct 45849 TATCTTCAATTTCAAT-TTGGGTTGAGTGTACAACAGATAAATTTCTTTTTGCAATTTCT 45791 Query 517928 CATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC--AAATCTGTTTTATATT 517985 | || | |||| | | | | ||| | || || ||| | ||| | ||| || Sbjct 45790 ACTTCTTTTCTTAATTTCTGAATAGCTCT--CTTATCACTTCTAAGATCAATGTTAGTTT 45733 Query 517986 TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATT--ATCAAAATCTTCACCTCC 518043 || |||| ||| || | | | || | || || || ||| |||||||| || || Sbjct 45732 TTTTCTTAAAAATTTTTATAAA--ATAGTCCATAACTCTTTGATCGAAATCTTCTCCACC 45675 Query 518044 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 518103 || | |||||| || | || || ||||| || | ||||| |||| | |||| Sbjct 45674 TAAATGAGTATTACCAGCTGTTGCGTATACTTCAAATACTCCATTATCAATAACTAAAAT 45615 Query 518104 AGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 518163 || ||||||| |||||||| || | |||| | | | || | | ||||| ||| Sbjct 45614 AGATACATCAAATGTTCCACCTCCTAAATCATATACTAATATACTTGTTTCT---TCT-- 45560 Query 518164 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223 |||||||| | ||| || || ||||||||||| |||||||| ||||| || | | || Sbjct 45559 -TTTTTATCTAAACCGTATGCCAAAGCAGCAGCTGTTGGTTCGTTAATGATACGTACAAT 45501 Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 || | ||| ||||| | || || ||||| || ||||| ||||||| ||| |||||||| Sbjct 45500 GTTCAAACCTGCAATGGTACCAGCGTCTTTTGTAGCTTGCCTTTGTGCATCATTAAAATA 45441 Query 518284 TGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTG 518343 ||||| || |||| || |||| | || |||||| | | | | || ||| Sbjct 45440 GGCAGGTACTGTAACCACAGCATTTTTAACAGGTTTACCCAAAAATGATTGAGCTATTTC 45381 Query 518344 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG-GGAATATTGCTTGGATTCAT 518402 |||||| || ||| | ||||| |||||||||||| | || | || | || Sbjct 45380 TTTCATCTTTTCTAACACCATTGCACTAATTTGTTCTGGTGCAAAAGTGGTATTTTTATC 45321 Query 518403 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC---TTTAAATGGCC 518459 || || || ||| || || |||| || || |||| | || || |||| Sbjct 45320 CTTAATCTG-GACTCGAATATTTGGT---TTTCCTTCATTGTTTACGATTTCGTATGGTA 45265 Query 518460 AGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTG 518519 | || || |||| | ||| || |||| ||| | |||||||| | || ||| Sbjct 45264 ACAATGTCCTATCCCTTACAACTTCCTGATCATCAAACTTCCTACCAATAAGTCTTTTAA 45205 Query 518520 CATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCA 518579 ||||||| | || | ||| || | | | ||| | |||||||||| ||||||| | Sbjct 45204 CATCAAACACCGTTTGGGTGGGGTGCAAGGTAGCCTCCAATTTGGCTGCCTCTCCAACC- 45146 Query 518580 GATGTTCTGTC--TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATT 518637 | ||| || ||| ||| || ||||| ||||| || | || || ||| | || || Sbjct 45145 -TTTCTCTCTCCATCTACAAAGGACACATACGATGGGGTAATACGGTTTCCTAGTTCGTT 45087 Query 518638 CGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAA 518697 | |||||| ||| | || |||| | ||||| || || || | |||||||| | Sbjct 45086 GTTCAAAATTTCTACTCTTCCGTTTTTGAACACACCAACGCAGCTGTAGGTTGTTCCCAG 45027 Query 518698 ATCAATACCAAT 518709 ||| ||||| || Sbjct 45026 ATCGATACCTAT 45015 Score = 131 bits (144), Expect = 1e-24 Identities = 211/302 (70%), Gaps = 15/302 (5%) Strand=Plus/Minus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTAATGTTCTAAATACTCCA 322144 || ||||||||||| || ||||| ||||||||| || ||| || | |||||||||| Sbjct 45691 TCGAAATCTTCTCCACCTAAATGAGTATTACCAGCTGTTGCGTATACTTCAAATACTCCA 45632 Query 322145 TTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTACG 322204 || ||| | | || ||||| || || ||| ||||||| ||||| || | || Sbjct 45631 TTATCAATAACTAAAATAGATACATCAAATGTTCCACCTCCTAAATCATATACTAATA-- 45574 Query 322205 TTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCA 322264 ||| || ||| ||| ||||| | ||||||||||||| | ||| || || Sbjct 45573 -TAC-------TTGTTTCTTC--TTTTTTAT---CTAAACCGTATGCCAAAGCAGCAGCT 45527 Query 322265 GTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTT 322324 |||||||| ||||| || | || | ||||| ||||| || ||| || || Sbjct 45526 GTTGGTTCGTTAATGATACGTACAATGTTCAAACCTGCAATGGTACCAGCGTCTTTTGTA 45467 Query 322325 GCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATAGGT 322384 ||||| || ||||| ||||||||||| || ||||| |||| || || || |||| |||| Sbjct 45466 GCTTGCCTTTGTGCATCATTAAAATAGGCAGGTACTGTAACCACAGCATTTTTAACAGGT 45407 Query 322385 TT 322386 || Sbjct 45406 TT 45405 >seq113 Length=373552 Score = 210 bits (232), Expect = 2e-48 Identities = 717/1097 (65%), Gaps = 53/1097 (5%) Strand=Plus/Minus Query 517278 CATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGA 517337 |||| ||||| | |||||| || ||||||||||| ||||| ||||| | || ||||| | Sbjct 60834 CATTTGCATCTACATCAAAGGTAACTTCAATTTGTGGGACTCCTCTAGGTGCGGGTGGAA 60775 Query 517338 TCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCT 517397 | || | || | ||||| || | | |||||||| ||| | || || |||||| | Sbjct 60774 TACCAACTAAGTCAAATGAGCCTAACATTTTATTATCGCTAGCCATTTCTCTTTCACCTT 60715 Query 517398 CGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATT 517457 | | || |||| ||||| ||||||||||| | |||| |||| | |||| Sbjct 60714 GATATACTTTGATACTAACTTGTGTTTGATTATCAGCTGCTGTTGAGAATATTTGAGATT 60655 Query 517458 TTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTT 517517 |||| || ||||| || ||||| | ||| | || || | || ||||||| ||||| Sbjct 60654 TTTTTGTTGGGATTGTCGTATTTCTGTTAATCAGTTTTGTGAAAACACCACCTAATGTTT 60595 Query 517518 CTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAG 517577 ||| ||| | || | ||| | ||||| | ||| | || |||| ||| || Sbjct 60594 CTATACCTAACGATAAGGGAATAACATCCAATAGTA----AT----AAGTCTTTTAT--- 60546 Query 517578 TTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 517637 || || | | | || |||| ||||| ||||| |||| || ||||||||||||| Sbjct 60545 -TTCTCCTTTTAATACACCTCCTTGTATAGCTGCACCTAATGCTACTGCTTCATCAGGAT 60487 Query 517638 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGA-AGTTGTCT--TACCT 517694 ||||| ||| | | | || |||||| | |||| | |||| ||| ||||| Sbjct 60486 TAACACTTTTCGATGGACTGTT----TTGAAATA-TTTGTTTTACAGTT-TCTGATACCT 60433 Query 517695 TAGGAATACGAGATGAT-CCTCCAACTAATACAATTTCATGCACCT-GTGATT-TATCCA 517751 | || || | | | || || ||||| | | |||||||| | | || || | | || Sbjct 60432 TTGGCATTCTTG-TCATACCACCAACAAGGATAATTTCATTAATTTCGTCCTTCTTTACA 60374 Query 517752 GTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAAC 517811 |||| ||| || | |||||| ||||| | | || | ||||| || || Sbjct 60373 --TTTGCATCTTTTATACACTTTTCACATGGTTCTATAGTTCCTTTTAACAAATCATGAC 60316 Query 517812 AAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATT---CCT------- 517861 | | |||||| ||||| || ||||| | | | | ||| || ||| Sbjct 60315 ATAATTCTTCTAATTTTGCCCTAGTTAACTTAATCTGTAAATGTTTTGGTCCTGTTTGAT 60256 Query 517862 TCGAACAAAGAATC---AACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTA 517918 | | | || || || || | | | ||||| || ||||||| || ||| Sbjct 60255 TTGCAGTAATAAAAGGTAAATTAATTTCT-GTTTGGGTTTTGCTAGATAGTTCAATTTTG 60197 Query 517919 GCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT-TTGCTGATTGATTCAAATCTGT 517977 || ||| |||| |||| ||| |||| ||| || | ||| ||||||||| | Sbjct 60196 GCTGTTTCTGCTGCTTCTCTTAATCTCTGTAAAGCTAATTTATCATTC-TTCAAATCTAT 60138 Query 517978 TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATTATCAAAATCT 518035 | | ||| |||| || || || | | | || || ||| | || | |||||||||| Sbjct 60137 ATGTTCCTTTTTCTTAAATTCGTCTATAAA--ATATTCCAATATTCGTTGATCAAAATCT 60080 Query 518036 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGA 518095 || || || | | ||||| || || ||| | |||| |||| || || | Sbjct 60079 TCTCCACCAAGTGATGTATTACCATTTGTTGCTTTCACTTCAAAAACACCTCCTAATATT 60020 Query 518096 GACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 518155 ||||| || || |||| || || || |||| |||| | | | || ||| || Sbjct 60019 TCCAAAATAGATATATCAAATGTACCTCCTCCCAAATCATATAC---TGCA---ATTACT 59966 Query 518156 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 518215 || | | |||| || | ||| | || || ||||| || |||||||| ||||||||| Sbjct 59965 TTTCCATCACTTTTTTCCAATCCAAAGGCTAACGCAGCTGCTGTTGGTTCGTTAATAATT 59906 Query 518216 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 518275 || | ||||| | || |||||| ||||||||||||| || |||||||| ||||||||| Sbjct 59905 CTTAGAACATCTAATCCTGCAATTTTTCCTGCATCTTTTGTTGCTTGTCTCTGTGAATCG 59846 Query 518276 TTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTT 518335 |||||||||||||||||||||||||| || | ||||| | | || | |||| Sbjct 59845 TTAAAATATGCAGGAACAGTAATAACAGCTTGGTGTACTTTTCTTCCTAAATAATTTTCA 59786 Query 518336 GCCGTTTGTTTCATTTT 518352 || |||| ||||||||| Sbjct 59785 GCAGTTTCTTTCATTTT 59769 Score = 114 bits (126), Expect = 1e-19 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 322256 GCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAA 322315 || ||||| |||||||| ||||| ||| | ||||||||||| || |||||||| | | | Sbjct 59932 GCAGCTGCTGTTGGTTCGTTAATAATTCTTAGAACATCTAATCCTGCAATTTTTCCTGCA 59873 Query 322316 TCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTT 322373 || |||||||||||||||| || ||||||||||| || ||||||||||| |||| Sbjct 59872 TCTTTTGTTGCTTGTCTCTGTGAATCGTTAAAATATGCAGGAACAGTAATAACAGCTT 59815 >seq177 Length=178137 Score = 163 bits (180), Expect = 2e-34 Identities = 1030/1623 (63%), Gaps = 70/1623 (4%) Strand=Plus/Plus Query 398805 TATAATTTTATTAAAAAACATATCAAAGAGATTAA-TAGAGTTATTAGATATGATCGTGA 398863 ||| ||||||||| | |||| | ||||||| || || ||| ||| ||||| Sbjct 41911 TATGATTTTATTATGCAGCATAAGGAT-AGATTAAATAAAGAGATTGATTATACACGTGA 41969 Query 398864 TTATAATCTAACCATT--TTCGGATTCAGGACTCTAGAAAAATCTTATCTTAAAAGAATC 398921 || ||| ||| | ||| || || || | || |||||| ||| ||| | | | || Sbjct 41970 TTTTAA-CTA-CGATTACTTTGGTTTTAAAACGTTAGAAAGATCATATTTATTACGTATT 42027 Query 398922 AACaaaaaaaTTGTTGAACGTCCTCAACACTTATTTATGAGAGTAGCTATTACACTCCAT 398981 || || ||||| | ||| | || || || || ||||||||||| | ||| | ||| Sbjct 42028 AATAATAAAATCATAGAAAGACCACAGCATTTGATTATGAGAGTATCAATTGGTATACAT 42087 Query 398982 TACAGGAAAAATGATCTCGACAGGATATTTGAAACTTATAAATATTTATCTAAAGGATAT 399041 | | ||||||| || | ||| ||||| ||| | | || || |||| Sbjct 42088 TT------AGATGATCTAGAAAAAGCATTAGAAACCTATCATCTGATGTCACAAAAATAT 42141 Query 399042 TTTACTCACGCAACACCTACATTATTTAATGCTGGTACAACACATGAACAACTTTCAAGT 399101 ||||| || ||||| || |||||||||||| | || ||| || |||| | ||| | Sbjct 42142 TTTACACATGCAACGCCAACATTATTTAATTCAGGGACACCAAGACCACAAATGTCATCT 42201 Query 399102 TGTTTTTTATTGGGTAT---TGGTGATTCTCTTGAAGAAATCAGTGAATGTTGGAAAGAA 399158 |||||||| || |||| | |||||| |||||| ||| |||| | ||| || Sbjct 42202 TGTTTTTTGCTGTGTATGAAAGCAGATTCTATTGAAGGAATTTTTGAAACATTAAAACAA 42261 Query 399159 TGTGCTTTAATCAGTAAACATGCAGGAGGAATTGGAATACATATGACTAATATTAGAGTT 399218 |||||||| || |||||| |||||| || ||||| || | || || || || Sbjct 42262 TGTGCTTTGATAAGTAAAACTGCAGGTGGTATTGGTGTA-GCAGTAC-AAGATATACGTG 42319 Query 399219 GAAGGA--GCATATATAGCTTCAACACAAGGAGAAGCAGGTGGTT---TAAGAGTTTTGA 399273 || || |||||||| ||| | || || || | || | | || | Sbjct 42320 GACAGAATTCATATATAAGAGGAACTAATGGTATTTCAAACGGATTAGTACCAATGTTAA 42379 Query 399274 CTATTTTCAATGATATTTCAAGATACGCAAATCAAGGT---GGTAAACGACCCGGTTCTT 399330 |||| || |||| | ||||| | | |||||||| || ||| || || || | Sbjct 42380 GAGTTTTTAACGATACAGCTAGATATGTAGATCAAGGTGGAGGAAAAAGAAAAGGATCAT 42439 Query 399331 TTGCTATTTTTATTGAACCGTGGCATGGAGACATATTCTTTTTTCTAGATCTCAAGAAAA 399390 |||| | | ||||||||| |||||| ||||||||| ||||||||| | | |||| Sbjct 42440 TTGCAGTATATATTGAACCATGGCATTCAGACATATTTGAATTTCTAGATTTGAGAAAAA 42499 Query 399391 ATACTGGAGCAGAAACAGAAAGAGCCAGAGATTTATTTT-TG-GGTTTGATGATTAATGA 399448 || ||| |||| | |||||| ||||||||||||| || ||||| | || || Sbjct 42500 ATCATGGTAAAGAAGAATTAAGAGCTAGAGATTTATTTTATGCTGTTTG--GGTTCCAGA 42557 Query 399449 CATTTTCATGGAAAGAGTTTATAAAGACGATGTTTGGTCATTAATGTGTCCGTCTCAATG 399508 | || ||| |||||||| | || | | |||| | ||||||||||| | |||| Sbjct 42558 TTTATTTATGAAAAGAGTTAAGGAAAATAAAAATTGGACTTTAATGTGTCCAAATGAATG 42617 Query 399509 TCCTAATCTTCTCAATAAATACGGAGACGAATTCACCAAAGAATATCTTAAATATGAAAG 399568 ||| | | | | || || || ||||| ||| |||| || |||||| Sbjct 42618 TCCAGGTTTGAGTGAAACATGGGGTGAAGAATTTGAAAAATTATATGAAAAGTATGAA-- 42675 Query 399569 TGAAGGTATTTATTTGAAACAAA----TAAGAGCTATTGATTTATGGTT--CAAGATTAT 399622 |||| | || | |||| ||| || |||| ||||||||||| | | ||| Sbjct 42676 -GAAGAAAATT-TAGGAAAAAAAACTGTATTAGCTCAAGATTTATGGTTTGCTATTTTAC 42733 Query 399623 GGAGTCCCAAATTGAGACAGGAGTTCCGTATGTTATGTTCAAAGATGCGATTAATGACAA 399682 ||| || ||||| ||||| || || || | ||| ||||||| | ||||| || Sbjct 42734 AAAGT--CAGATTGAAACAGGTGTACCATACATGTTGTACAAAGATTCATGTAATGCTAA 42791 Query 399683 ATCAAATCAAATTAATATTGGTGTTGTTAATGGTTCAAATTTATGTTGTGAAATTGTGGA 399742 ||| ||||||| ||| | ||| |||| || ||| |||| |||||||| | || Sbjct 42792 ATCTAATCAAAAAAATTTAGGTACAATTAAATGTAGTAATCTATGCTGTGAAATAATAGA 42851 Query 399743 AGTATCCGACA-AAAATAATTTCTCAGTATGTAATTTATCATCAATTTGTCTGCCGAGAT 399801 | ||| | || | || | | | || ||||| ||| |||| ||| | | | || Sbjct 42852 A-TATACATCACCAGATGAAGTTGCTGTTTGTAACTTAGCATCTATTGCTTTATGTAAAT 42910 Query 399802 TTGTTAAAATTATTGATGAAGTCCCAACTTTCAATTACCAAAAATTATTCAAGATTAGTC 399861 |||| | | | |||| ||| |||| ||||||||| | |||| Sbjct 42911 TTGTAGACACAGAAAAAAAAGT------TTTTAATTTTAAAAAATTATATGAAATTACAA 42964 Query 399862 GTATTCTCACTCGCAATCTCAATAATATTATTGACATTAATTTCTATCCTCTCGATAAAA 399921 ||| | || | ||| | | || |||||||| | |||| |||||| | | || Sbjct 42965 AAATTATTACGAGAAATTTAGACAAAATTATTGAAAGAAATTATTATCCTGTTAAGGAAG 43024 Query 399922 CTCGGATTACCAATCTTCGTGATCGTCCTATTGGTATTGGAGTTCAGGGATTAGCTGATG 399981 || || | || | || | || || || ||||| || || ||||||||||| Sbjct 43025 CTGAGAGATCAAACAGGAGACATAGACCAATAGGAATTGGTGTACAAGGATTAGCTGACA 43084 Query 399982 TATT--TGCTATGTTTAAGA-CTCCTTTTGATTCGGAAATTGCTCGTGATCTCAATCGTA 400038 ||| |||| ||||||| ||||| || || || || || | ||| | Sbjct 43085 CATTTATGCT---TTTAAGATATCCTTACGAATCAGATGAAGCAAAAGAATTAAATAAAA 43141 Query 400039 AAATTTTCGAAACAATTTATTATGGAGCTTTAACAGAATCCAATAAACTTGCTAGAGAAT 400098 |||||| ||||| || || |||| || ||| | || | || | |||| | | Sbjct 43142 GAATTTTTGAAACTATGTACTATGCTGCATTAGAAATGTCTATGGAATTAGCTAAAATTT 43201 Query 400099 TTGGTACATATCAAACTTATCAAGGAAGTCCTATTTCTCAAGGAAAATTCCAATTTGATC 400158 ||| | |||| || ||||| |||| ||||| | ||||| | | || |||||| Sbjct 43202 ATGGGAAATATGAATCTTATGAAGGTAGTCCAGCTAGCCAAGGTATTCTTCAGTTTGATA 43261 Query 400159 TTTGGAATTTCGA--TAAATCACAATTGAGCGGAATGTGGGATTGGGAACTTTTGCGTCA 400216 | |||||| || | | || |||| | | ||||| ||| || |||||| | Sbjct 43262 TGTGGAATATCAAAGTTGATAACAAAT-ACTGGAAT-TGGAAT---GAACTT---AAAGA 43313 Query 400217 AGAAATTTTAAATCATGGTGTTCGTAATAGTCTAGTTACAACCTGTATGCCAACTGCAAG 400276 | ||||| ||| ||||| | | ||| || || | | |||||| |||||| Sbjct 43314 AAAAATTAAAAAACATGGACTAAGGAATTCCTTACTTTTAGCACCTATGCCTACTGCATC 43373 Query 400277 TACTTCTCAAATTATGGGATGGAATGAATGTATTGAACCTTATACAGAAAATATTTATTC 400336 |||||| ||||| | ||| ||||||| | ||||||| || || |||||||| | Sbjct 43374 TACTTCACAAATATTAGGAAACAATGAATCTTTTGAACCATACACTAGCAATATTTACTA 43433 Query 400337 AAGA--AGTACTATGGCTGGAGAATATTTTGTGATTAATAAACATCTCATAAAAGATCTT 400394 ||| |||||| | |||||||| || || | ||| ||| | | ||||| ||| Sbjct 43434 CAGAAGAGTACTCAG--TGGAGAATTCTTCGTTGTCAATCCTCATTTACTTAAAGA-CTT 43490 Query 400395 ATT 400397 ||| Sbjct 43491 ATT 43493 >seq29 Length=163906 Score = 140 bits (154), Expect = 2e-27 Identities = 317/466 (68%), Gaps = 12/466 (3%) Strand=Plus/Plus Query 303733 CGAAGTCCACCATCTCTTGATCTACCTTCTGGCGCTTGTCTTGTAAGTAACTGTGTTGGT 303792 || || || |||||||||||||||||||||| | |||||| |||| | | ||| Sbjct 159654 CGGAGACCTCCATCTCTTGATCTACCTTCTGTTGGTTGTCTCGTAATCATAGTTAAAGGT 159713 Query 303793 CCACGAGCGCGTGAGTGGGCCTTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGTC 303852 || | | | | || ||| || ||||||| |||||||||||||||||||| || Sbjct 159714 CCTCTACTTCTAGCATGTATCTTATCTTCTACCATATGTTTCAATCTCTGATAATAAGTA 159773 Query 303853 GGACCAATAAAAATTTT-AACTGGTAATTTTTTACCATTCATTCCATTATACATAGTTTC 303911 ||||||||||| ||||| ||| ||| || | ||||| |||||| |||| | | || Sbjct 159774 GGACCAATAAATATTTTGGACT-TTAACATTCTTCCATTATGTCCATTGTACAAAATATC 159832 Query 303912 ATTACCCCATTCTTCATAACCAGCAGCAACTAAT-TCATCGTTAATGGCATTA-AGATCA 303969 ||| || ||| |||||| || | |||| || || || | | || || | Sbjct 159833 ATTTCCATATTTTTCATATCCTAATTTATGTAATCTCTGCGATATTTCCTGTACAGTT-- 159890 Query 303970 ACACTTGTAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAAT 304029 | ||| ||| || |||||||| || | |||||| || ||| || ||| || | Sbjct 159891 ATTTTTGAAAAGGGAGTTGCATCACCTTCTCCTCCTTCAATTGCTGCTACTTTACCAGCT 159950 Query 304030 AAACATTCAATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATAATA 304089 |||||||||| | || ||||||||||| || || | || |||||| ||||| Sbjct 159951 AAACATTCAACTAAATGTCCAATAGTCATTCGAGAAGGAACTGCATGAGGATTCATAATG 160010 Query 304090 ATATCGGGAATTAATCCAGATTTACTGAATAACATATCTGCTCGATGAGCTTTGTA--TC 304147 ||||| || | |||| ||| ||| ||||||| || | | | |||| || Sbjct 160011 ATATCAGGGAAAGTTCCATCACAACTAAATGGCATATCT--TCTGTTCGATATGTAATTC 160068 Query 304148 CAATGGTACCTTTTTGACC-TGCTCTTGACGAAAATTTATCACCTA 304192 | || ||||||||||| || ||| || | |||||||||||||| Sbjct 160069 CTATAGTACCTTTTTGTCCATGC-CTACTTGCAAATTTATCACCTA 160113 >seq158 Length=95427 Score = 87.8 bits (96), Expect = 1e-11 Identities = 172/250 (69%), Gaps = 6/250 (2%) Strand=Plus/Plus Query 668837 ATGTCTGAAAGATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGT 668896 ||||| ||||||||| |||||||||||| | ||||| | |||||| ||||||| | Sbjct 9693 ATGTC--AAAGATTAAAAGGTAAAGAAGGAAGATTTAGATGTAATTTGTCGGGAAAAAGA 9750 Query 668897 GTCGATATGTCTGCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTT 668956 || ||| | || | ||||| ||| | ||||||| |||||| || | |||||||| Sbjct 9751 GTAGATTTTTCCAGTAGAACAGTCATTTCACCTGATCCTAATATTTCTATAGATGAAGTT 9810 Query 668957 GGTGTTCCTCTTATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAAT 669016 | ||||| || ||||||| | | || | | ||| |||||| ||||||| Sbjct 9811 GTCATTCCTAAAATGATTGCTATGAGGTTAACATATCCTGAAGTTGTAAATAAACATAAC 9870 Query 669017 ATTGAGTATTTGACTCAATTAGTGAAAAATGGTAAAAGAGTATAT--CCGGGTGCCAATT 669074 || || | | | || | | ||||||||| | || ||||| || ||||| |||| Sbjct 9871 ATAAAGAAACTTAAGAAACTTATTAAAAATGGT-ACTGA-TATATGGCCAGGTGCTAATT 9928 Query 669075 TTGTAATCAA 669084 ||| || || Sbjct 9929 ATGTTATTAA 9938 >seq201 Length=395802 Score = 86.0 bits (94), Expect = 5e-11 Identities = 87/111 (78%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 200572 ATTCATTATAATGATGAGGAAATTTCAAATCGATTCCACCAAAATGAATATC-AATACTA 200630 ||||||||| ||||||||||||| ||||| || |||||| ||| ||||| |||||| Sbjct 352871 ATTCATTATCATGATGAGGAAATCGTAAATCAATACCACCACTATGTATATCTAATACT- 352813 Query 200631 TTTCCTAATGTTTTCTTGATCATGGCTGAACATTCAATATGCCAACCAGGT 200681 |||||||| | || | ||| | |||||||| ||||||||||| ||| Sbjct 352812 TTTCCTAAAATATTACTAGCCATAGTAGAACATTCTATATGCCAACCTGGT 352762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780649512443704