Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016 -06-16] 3,484 sequences; 36,406,953 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq29 87.8 2e-12 >seq29 Length=163906 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 126920 TACTGGAAGAAGGATAAAGAGTAAAATTTTTATAGGTCCAACATACTATCATCGTCTTAA 126979 || |||||||| | ||||| ||||| ||||| ||||| || || ||||| | | || Sbjct 159812 TAATGGAAGAATGTTAAAGTCCAAAATATTTATTGGTCCTACTTATTATCAGAGATTGAA 159753 Query 126980 ACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGTCAAGTAAC-AACATTACATC 127038 ||||||||| ||||||| || |||||||||||| || | |||| | ||||| Sbjct 159752 ACATATGGTAGAAGATAAGATACATGCTAGAAGTAGAGGACCTTTAACTATGATTAC-GA 159694 Query 127039 GTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAAG 127098 | ||||||| ||| | || || ||| || | ||||||| |||||||||| | Sbjct 159693 GACAACCAACAGAAGGTAGATCAAGAGATGGAGGTCTCCGATTTGGGGAAATGGAAAGGG 159634 Query 127099 ATTGTAT 127105 | ||||| Sbjct 159633 ACTGTAT 159627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658374526540640