Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016 -06-16] 3,484 sequences; 36,406,953 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq41 370 7e-97 seq177 291 5e-73 seq68 210 1e-48 seq113 181 7e-40 seq193 140 2e-27 seq29 113 3e-19 seq56 104 2e-16 seq49 98.7 6e-15 seq24 95.1 8e-14 seq127 89.7 3e-12 seq7 87.8 1e-11 >seq41 Length=273930 Score = 370 bits (410), Expect = 7e-97 Identities = 673/969 (69%), Gaps = 33/969 (3%) Strand=Plus/Minus Query 475318 TGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGA 475377 ||| ||| |||| || | | ||||||||| | || |||| ||||| || ||||| Sbjct 235387 TGATGTATCTTTGTTAACTATAGAAGATGGTATATTTGAAGTAAAGGCAACTGCAGGAGA 235328 Query 475378 TTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTTGAAGATTT 475437 | | || | || || |||||||||||||| ||| | ||| | ||||| |||||||| Sbjct 235327 TACTCACTTAGGAGGAGAAGATTTTGATAACAGATTGGTAAACTTTTGTGTAGAAGATTT 235268 Query 475438 CAAGAGGAAAAATAAAGTT---GATCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAG 475494 ||||| ||||||| || ||| | |||| | | || |||||| ||| | | || Sbjct 235267 TAAGAGAAAAAATAGAGGAAAAGATTTATCAAAAAATAGTAGAGCATTGAGAAGATTGAG 235208 Query 475495 AACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGT 475554 ||| ||||| | || || || | | ||||| |||| ||| | ||| | ||| | Sbjct 235207 AACCCAATGTGAGAGAGCAAAACGTACGTTGTCTTCATCTACCCAAGCAACTATAGAAAT 235148 Query 475555 TGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGA 475614 |||||| ||||||||||| |||||||| | | | ||| || |||| ||||||||| Sbjct 235147 TGATTCACTTTTTGAAGGTATTGATTACAGTGTAACTGTTAGCAGAGCTAGATTTGAAGA 235088 Query 475615 TATTTGTTCTGATCTCTTTA-GAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATT 475673 | ||| ||| || ||| | | ||| | | || || || ||||| | | |||| Sbjct 235087 GTTGTGTATTGA-CTATTTCCGTGATACATTAGTTCCAGTCGAGAAAGTTTTAAAAGATG 235029 Query 475674 CTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTC 475733 | | | || || | || |||||| |||| | || || |||||||||||||||| Sbjct 235028 CAATGATGGATAAGAAAAGTGTACATGAAGTTGTGTTAGTTGGTGGTTCAACAAGAATTC 234969 Query 475734 CAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAA-AAGTT---AAATGAAAGT 475789 ||||||| | | || || || |||||||| || ||| | | || || Sbjct 234968 CAAAAATTCAAACATTGATTAAGGAATTCTTTAATGGAAAGGAAGCTTGTAGATCAA--- 234912 Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 |||||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||| Sbjct 234911 -TAAATCCTGATGAAGCTGTTGCTTATGGTGCAGCTGTTCAAGCAGCCATTTTATCAGGT 234853 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACT--TGTT-GACGTAACTCCACTTTCATTA 475906 | ||| | | | || || ||| |||| |||| || ||| | | | || ||| Sbjct 234852 GA-TCAATCTA-ATGCTGTTCAAGATT-TACTCCTGTTAGATGTATGTTCCTTATCCTTA 234796 Query 475907 GGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCA 475966 ||| | ||||| | || || ||||||| || | ||||| |||||||| | || ||| Sbjct 234795 GGTTTAGAAACTGCAGGTGGTGTTATGACCAAGTTAATTGAGAGAAATACAACAATTCCA 234736 Query 475967 TGCAAAAAA---TCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATC 476023 |||||||| ||||| | ||| | || ||| ||||||||||| || |||| || Sbjct 234735 -GCAAAAAAAAGTCAAA--TTTTTACTACATATGCTGATAATCAACCAGGTGTATTAATT 234679 Query 476024 CAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAAT 476083 || | | ||||| |||||| ||| |||||||| || || | |||| || || Sbjct 234678 CAGGTATACGAAGGAGAAAGAGCATTAACTAAAGACAACAATTTGTTAGGAAAATTCCAT 234619 Query 476084 CTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATT 476143 || || |||||||| ||||| || ||| ||| || |||||||||||||| || |||||| Sbjct 234618 CTAGATGGTATTCCACCTGCACCAAGAAAAGTACCACAAATTGAAGTTACATTCGATATT 234559 Query 476144 GATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGT----AACAAGAGTAA 476199 |||||||||||||| | |||||||| ||| || ||||| | | ||||| || Sbjct 234558 GATGCAAATGGTATATTAAATGTTACAGCTGTGGAAAAATCAACTGGTAAACAA----AA 234503 Query 476200 AAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGT 476259 |||| || ||||| || || |||||||| | |||| ||||| | |||||||| Sbjct 234502 TCATATTACCATTACCAATGATAAAGGTAGATTATCACCAGAAGAAATTGATCGTATGGT 234443 Query 476260 TGATGAAGC 476268 | |||| || Sbjct 234442 TAATGACGC 234434 Score = 237 bits (262), Expect = 1e-56 Identities = 421/607 (69%), Gaps = 9/607 (1%) Strand=Plus/Minus Query 474319 GTCCAGAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCA 474378 ||||| || || ||||||||||| | ||||| || || ||||| | ||| ||| Sbjct 235999 GTCCAATATAGCCATTGGTATTGACCTTGGAACGACCTATTCCTGTGTTGGTGTATGGAG 235940 Query 474379 AAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGT 474438 ||||| || ||||| || ||||| |||||||| ||||| ||||| || ||||| || || Sbjct 235939 AAATGAGAATGTAGATATTATTGCTAATGACCAGGGTAACAGAACTACCCCATCGTACGT 235880 Query 474439 TTCTTTTACTGAAACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTA 474497 | ||||||| || || || | || | ||||| |||||||| || |||||| ||| | Sbjct 235879 TGCTTTTACCGATACGGAGAGAT-TAATTGGTGATGCTGCAAAGAATCAAGTTGCTAGAA 235821 Query 474498 ATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCA 474557 |||||| || || |||||||||| || || || ||||| | || ||| || | Sbjct 235820 ATCCTGAAAACACAGTTTTTGATGCAAAGAGGTTAATTGGAAGGAAATTTACCGAATCTT 235761 Query 474558 CTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGT--GATAAATGTTGG-TGGTAAAC 474614 | || || ||||||| |||||||| |||| || || | |||| | |||| Sbjct 235760 CAGTACAGAGTGATATGAAGCATTGGCCATTTACCGTAAAATCAGGATTGGAAGAGAAAC 235701 Query 474615 CATATATAGAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTT 474674 | || |||| | || ||| || | ||| |||| || ||| |||| || | Sbjct 235700 CCATGATTGAAGTTACCTACCAAGGAGAGAAAAAATTATTTCACCCAGAAGAAATATCAT 235641 Query 474675 CAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTG 474734 | ||||||||| || |||||| ||| || | | | | ||| || | | Sbjct 235640 CCATGGTTTTACAAAAGATGAAAGAAAATGCTGAAGCCTTTTTGGGAAAATCTATTAAGA 235581 Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || |||||||| || || |||||||||||||||||| | |||||||| || |||| Sbjct 235580 ATGCTGTTATTACTGTCCCTGCTTATTTTAATGATTCTCAAAGACAAGCAACAAAGGATG 235521 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | |||| || ||||| | |||||| | | |||||||| |||||||| || || || Sbjct 235520 CTGGAACTATCGCAGGATTGAATGTTATGAGAATTATTAACGAACCAACTGCTGCAGCTA 235461 Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGACAA--AGAAGTAAATGTTTTAATCTTTGATTG 474912 ||||||||||| | |||| || || || ||| ||| ||||||| || |||| Sbjct 235460 TTGCTTATGGTTTACATAAAAA--AGGAAAAGGTGAAAAAAACATTTTAATTTTCGATTT 235403 Query 474913 TGGAGGT 474919 |||||| Sbjct 235402 AGGAGGT 235396 >seq177 Length=178137 Score = 291 bits (322), Expect = 5e-73 Identities = 945/1440 (66%), Gaps = 73/1440 (5%) Strand=Plus/Minus Query 591851 CTTCTTGAATAAATATTTTCGGTAAATGGTTCAATACATTCATTATATCCTTTAATTTGA 591910 ||||| | |||||||| || ||||||||| | ||||||| | |||| ||||| Sbjct 43439 CTTCTGTAGTAAATATTGCTAGTGTATGGTTCAAAAGATTCATTGTTTCCTAATATTTGT 43380 Query 591911 GATGTACTTGCTGTTGGCATACATG-TAGTAGTTAAACTGTTTCTAACACCATATATCAT 591969 || ||| ||| || |||||| || || ||| || || || | |||| | | | Sbjct 43379 GAAGTAGATGCAGTAGGCATAGGTGCTAAAAGT-AAGGAATTCCTTAGTCCATGTTTTTT 43321 Query 591970 TATCTGTTCCCGAAGAGTTTTCCAATCCCACATTCCACTTAATTTATCTTCACCA---AG 592026 || | ||| ||| ||| || ||| |||||| | |||| | ||| | | Sbjct 43320 AATTTTTTCTTTAAG----TTC--ATTCCA-ATTCCAGT--ATTTGTTATCAACTTTGAT 43270 Query 592027 ATTCCATAAATCAAACTGGAATTTACCTTTTGAAAGTGGACTTCCCCAAAAGGTTTCATA 592086 |||||| | ||||||||| | |||||| | |||||| || | | | |||||| Sbjct 43269 ATTCCACATATCAAACTGAAGAATACCTTGGCTAGCTGGACTACCTTCATAAGATTCATA 43210 Query 592087 TGGACCAGATTCTTTGGCCATTTGTAATGA---TTCTGTCATTGTTCCAAAATATATAGT 592143 | ||| | ||| || | || | || |||| | || || | || ||||| Sbjct 43209 TTTCCCATAAATTTTAGCTAATTCCATAGACATTTCT---AATGCAGCATAGTACATAGT 43153 Query 592144 TTCAAATATTTTCCTATTAAGATCTCGAGCAATATCAGAATCAAATGGA-ATTTTAAATA 592202 |||||| ||| | |||| | ||| || ||| || || | ||| || ||||| Sbjct 43152 TTCAAAAATTCTTTTATTTAATTCTTTTGCTTCATCTGATTCGTAAGGATATCTTAAA-- 43095 Query 592203 TAGCAAACACAT--CGGCTAATCCTTGTACACCAACGCCAATAGGTCTATGGCGTAAATT 592260 |||| | | | | ||||||||||||||||||| || || |||||||| | || Sbjct 43094 -AGCATAAATGTGTCAGCTAATCCTTGTACACCAATTCCTATTGGTCTATGTCTCCTGTT 43036 Query 592261 TGAAACACGTGTTTTTTCTACTGGATAATAATTTACATCAATAATATTATTTAAATTTCT 592320 ||| | || | || |||||||||||| |||||||| || | ||||||||| Sbjct 43035 TGATCTCTCAGCTTCCTTAACAGGATAATAATTTCTTTCAATAATTTTGTCTAAATTTCT 42976 Query 592321 TGTAATAATTCTTGCGACCTTGTACAATTTATTATAATCAAACTCTGGAACACCGTTTTC 592380 ||||||||| ||| | | || ||||| ||| ||| ||| ||| ||||| Sbjct 42975 CGTAATAATTTTTGTAATTTCATATAATTTTTTAAAATTAAA------AACTTTTTTTTC 42922 Query 592381 A-TGAATAATAAATTTAGGTAAACAAATTGATGACAAATTACAAACTGCATATTCATCTG 592439 || || ||||||| |||| ||| |||| || |||||||| ||| |||||||| Sbjct 42921 TGTGTCTAC-AAATTTACATAAAGCAATAGATGCTAAGTTACAAACAGCAACTTCATCTG 42863 Query 592440 CAGATGAGAATTCTACAATTTCACAACAAAGATTTGAGCCATTAATTACGCCTATATTAA 592499 |||| |||||| |||||||| || ||||| | |||||| |||| ||| Sbjct 42862 GTGATGTATATTCTATTATTTCACAGCATAGATTACTACATTTAATTGTACCTAAATTTT 42803 Query 592500 TCTGATTTGATTTTTGATTGATAGCATCTTTAAACAATATGTATGGTACACCTGTTTCAA 592559 | ||||| ||||| ||| | |||||| |||| |||||||||||||||||||||| Sbjct 42802 TTTGATTAGATTTAGCATTACATGAATCTTTGTACAACATGTATGGTACACCTGTTTCAA 42743 Query 592560 TTTGTGTTTCCATTATTTTAAACCATAAATCTCTTGCT----TTGATTTGTTTTATAAAT 592615 | || ||| | || ||||||||||||| ||| | ||| ||| ||||| Sbjct 42742 TCTGACTTTGTAAAATAGCAAACCATAAATCTTGAGCTAATACAGTTTTTTTTCCTAAAT 42683 Query 592616 CTACCCTCATTTTCATA--TTTAAGATAAGCTTTATTAAATTCTTCACCATAT-TTTCCT 592672 | || | |||||| ||| | |||| ||| | |||||||||||| || |||| Sbjct 42682 TT----TCTTCTTCATACTTTTCATATAA--TTTTTCAAATTCTTCACCCCATGTTTCAC 42629 Query 592673 ACAATATCTGGACATTGTGATGGACACATAAGTGACCAATTTTCATCTTTTTCAACACGA 592732 ||| | ||||||||| ||||||||| | | |||||||| || || | ||| | Sbjct 42628 TCAA-ACCTGGACATTCATTTGGACACATTAAAGTCCAATTTTTATTTTCCTTAACTCTT 42570 Query 592733 TCCATGAAAATATTATTAATCATTAATCCAAGGAATAAATCTCTGGCTCTTTCCGTTTCA 592792 | ||| || | || || | | || ||||||||||| |||||| ||| Sbjct 42569 TTCATAAATAAATCTGGAACCCAAACAGCATAAAATAAATCTCTAGCTCTTAATTCTTCT 42510 Query 592793 GCACCAGTATTTTTCTTTAGATCAAGGAAGAAAAATATATCACCATGCCAAGGTTCAATA 592852 |||| |||||| | | ||| || || |||||| || |||||| ||||||||| Sbjct 42509 TTACCATGATTTTTTCTCAAATCTAGAAATTCAAATATGTCTGAATGCCATGGTTCAATA 42450 Query 592853 AATACCGCAAATGAACCAGCTCTTTT---ACCACCTTGATTCGCATATCTGGCTATGTCA 592909 |||| |||||||| || |||||| |||||||||| ||||||| ||| | || Sbjct 42449 TATACTGCAAATGATCCTTTTCTTTTTCCTCCACCTTGATCTACATATCTAGCTGTATCG 42390 Query 592910 TTATATATTGATAATACT----CTCAATCCGTTAGATGTACCTTGAGTAGAACTAATATA 592965 ||| | | | ||| | | || |||||||| || |||| | ||| || ||||| Sbjct 42389 TTAAAAACTCTTAACATTGGTACT-AATCCGTTTGAAATACCATTAGTTCCTCTTATATA 42331 Query 592966 --AGCTCCTTCAACCCGAACATTAGACATATTAATACCTATACCTCCCGCAAATTTACTA 593023 | || || || | || || | | ||| ||||| || ||| |||||| Sbjct 42330 TGAATTCTGTCCACGTATATCTTGTACTGCT--ACACCAATACCACCTGCAGTTTTACTT 42273 Query 593024 ATAACAGCACAATCTTTCCAAGATTCACCTAATGATGTCAT---ATCATCTTTTACACCC 593080 || | |||||| | ||| | | |||| | | | || ||| |||| | || | Sbjct 42272 ATCAAAGCACATTGTTTTAATGTTTCAAAAATTCCTTCAATAGAATCTGCTTTCATACAC 42213 Query 593081 ATTAAAAAACAACTTGATAATTGT--TCATAAGGAGTACCCGCATTAAATAAAGTTGGAG 593138 | ||||||||| ||| | |||| || | || || || | ||||||||| ||||| | Sbjct 42212 AGCAAAAAACAAGATGACATTTGTGGTCTT--GGTGTCCCTGAATTAAATAATGTTGGCG 42155 Query 593139 TTGCATGAGTAAAATATCCTTCTGATAACATTTCATATGTTTCAAAAATTTTAGATAAAT 593198 ||||||| ||||||||| || ||| | || | ||| ||||| || ||| || | Sbjct 42154 TTGCATGTGTAAAATATTTTTGTGACATCAGATGATAGGTTTCTAATGCTTTTTCTAGA- 42096 Query 593199 TGCCTGTTCTATAATGTAGTGCAATAGCTACTCGCATCCATAAATGTTGAGGTCTTTCTA 593258 | |||| |||||| |||| | ||||| ||| ||||| || |||||||||| Sbjct 42095 ----TCATCTA-AATGTATACCAATTGATACTCTCATAATCAAATGCTGTGGTCTTTCTA 42041 >seq68 Length=204961 Score = 210 bits (232), Expect = 1e-48 Identities = 470/705 (67%), Gaps = 17/705 (2%) Strand=Plus/Plus Query 475595 ACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTT 475654 ||||| || ||||||||||| | | ||| | || || |||| | ||||| ||| Sbjct 45882 ACAAGAGCAAAATTTGAAGAATTAAATGATGACTTGTTCAGGGAAACTCTAGAACCAGTT 45941 Query 475655 GAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTA 475714 | ||||| | ||| | ||| ||| || || | | |||||||| ||||| Sbjct 45942 AAGAAAGTTTTGGATGATGCAAAATATGAAAAGAGTAAAATAGACGAAATTGTACTTGTT 46001 Query 475715 GGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAA 475774 || ||||| ||| | || || ||||| | |||| | | | |||||| || ||| Sbjct 46002 GGTGGTTCTACACGTATACCTAAAATTCAACAAATAATAAAAGATTTTTTTAACGGAAAA 46061 Query 475775 AAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCA 475834 | ||| | | | || ||||||||||| || |||||||| |||||| | ||||| Sbjct 46062 GAACCCAATAGAGGAATTAACCCTGATGAAGCCGTAGCATATGGTGCTGCTATTCAAGCT 46121 Query 475835 GCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACT 475894 | |||| | | |||| || ||| || | || ||||| | | || |||||| Sbjct 46122 GGTATTATCTTAGGTGAA------GAGTTACAAGATG---TTGTATTATTAGATGTAACT 46172 Query 475895 CCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAAT 475954 || | || ||||| | ||||||||||| || ||||||||| | |||||| | |||||| Sbjct 46173 CCCTTAACACTAGGTATAGAAACAGTTGGTGGTATTATGACTCAACTTATTAAAAGAAAT 46232 Query 475955 ACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 || || || ||||||||| || ||||||||| ||| ||||||||| || || Sbjct 46233 ACAGTAATTCCGACAAAAAAATCACAAACATTTTCCACCTATCAAGATAATCAACCAGCT 46292 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 ||| || ||| | |||||||| |||||| ||| ||||| |||||| | | ||| Sbjct 46293 GTATTAATACAAGTATTTGAAGGGGAAAGAGCATTAACTAAGGATAATCATTTGTTAGGA 46352 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | ||| | || || || || ||||| | ||||| || || |||| ||||| || Sbjct 46353 AAATTTGAACTATCTGGCATACCACCTGCACAAAGAGGTGTACCCAAAATAGAAGTAACA 46412 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAAC--- 476191 || | ||||| ||||||||| | |||| || ||||| || ||| Sbjct 46413 TTCACTGTTGATAAAAATGGTATATTACATGTAGAAGCAGAAGATAA----AGGAACAGG 46468 Query 476192 -AAGAGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCA 476250 || |||||| ||| || |||||||| || |||||| || | |||||||||| | Sbjct 46469 AAAAAGTAAAGGTATTACCATTACAAATGATAAAGGTAGACTTTCAAAAGAACAAATAGA 46528 Query 476251 ACGTATGGTTGATGAAGCCAAAGAGTTTGAAGAAGCTGATAACAA 476295 | ||| || | || || || | |||| ||| | ||||| || Sbjct 46529 AAAAATGATTAACGATGCAGAAAAATTTGCAGATGAAGATAAAAA 46573 Score = 120 bits (132), Expect = 2e-21 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 474653 TTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCA 474712 ||| |||| ||||||||| | ||||||| |||| || |||||| ||| || ||| Sbjct 45336 TTTGCACCAGAACAAATTAGTGCAATGGTGTTAGAAAAGATGAAAGAAATAGCTCAATCA 45395 Query 474713 TATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCT 474772 | | | || || || | |||| || |||| || || || |||||||||||| | Sbjct 45396 TTTTTGGGTAAACCTGTTAAAAATGCTGTGGTTACAGTACCTGCCTATTTTAATGATGCA 45455 Query 474773 CAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATT 474832 ||| | ||||| || ||||| || || | ||||||||| | || || ||||||| ||| Sbjct 45456 CAAAGGCAAGCTACAAAAGACGCTGGTACCATTGCAGGTTTGAACATTGTACGTATCATT 45515 Query 474833 AATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || ||||||||||| || || | || || ||| | ||||| || Sbjct 45516 AACGAACCAACAGCTGCTGCTTTGGCATACGGTTTAGATAAAAA 45559 >seq113 Length=373552 Score = 181 bits (200), Expect = 7e-40 Identities = 456/679 (67%), Gaps = 28/679 (4%) Strand=Plus/Plus Query 475595 ACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTT 475654 || ||||| ||||| ||||| | ||| |||| | || | | ||| || ||||| | Sbjct 60291 ACTAGGGCAAAATTAGAAGAATTATGTCATGATTTGTTAAAAGGAACTATAGAACCATGT 60350 Query 475655 GAACAAGT-TCTCAGAGATTCTAAACTTGACAAATCAC-AAGTCCATGAAATTGTTCTTG 475712 ||| |||| | | | |||| | ||| | | || || || | |||||||| | |||| Sbjct 60351 GAA-AAGTGTATAAAAGATGC-AAATGTAAAGAAGGACGAAATTAATGAAATTATCCTTG 60408 Query 475713 TAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCAT-CATAT-TTTAATGG 475770 | || ||| |||||||| ||||| || ||||| || | | || || ||| | Sbjct 60409 TTGGTGGTATGACAAGAATGCCAAAGGTATCAGAAA--CTGTAAAACAAATATTTCA--- 60463 Query 475771 TAAAAAGTTAAATGAAA-GTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCC 475829 ||| ||| | |||| |||| |||||||||||||| || |||| || || ||| | | Sbjct 60464 -AAACAGTCCATCGAAAAGTGTTAATCCTGATGAAGCAGTAGCATTAGGTGCAGCTATAC 60522 Query 475830 AAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACG 475889 ||| || | | ||| ||| || | | || || | || ||||| | |||| Sbjct 60523 AAGGAGGTGTATTAAAAGGAGAAATAAAAGA----CTTATTACTATTGGA--TGTT---- 60572 Query 475890 TAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACA 475949 | ||| | || |||||| | |||||| | || || || | || || || ||| ||| Sbjct 60573 --ATTCCCTTATCGTTAGGTATAGAAACATTAGGTGGTGTTTTCACAAAACTGATTAACA 60630 Query 475950 GAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAA 476009 ||||||| | |||||| |||||||| || |||| || || |||||||||||| Sbjct 60631 GAAATACGACAATCCCAACAAAAAAATCTCAAATATTCTCAACAGCAGCTGATAATCAAA 60690 Query 476010 CAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAAC 476069 || || | ||| || | | | ||||||||||| || | ||| |||||||| | Sbjct 60691 CACAAGTTAGTATCAAAGTATATCAAGGTGAAAGAGAAATGGCTAGCGATAATAAAATGT 60750 Query 476070 TTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAG 476129 | || | ||| | | | |||||||| || || || |||||||| || |||||||||| Sbjct 60751 TAGGCTCATTTGACTTAGTTGGTATTCCACCCGCACCTAGAGGAGTCCCACAAATTGAAG 60810 Query 476130 TTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTA 476189 |||| |||||| | |||||||||| ||| | || | | ||| || ||| | | Sbjct 60811 TTACCTTTGATGTAGATGCAAATGCAATTATCAACATATCAGCTATCGACAAAATGACAA 60870 Query 476190 ACAAGAGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTC 476249 | |||| | | ||||| ||| ||| | | ||||| |||| | ||||| ||||| Sbjct 60871 ATAAGAAACAGCAAATAACCATT-CAA--AGTAGTGGTGGATTGAGCAAAGAAGAAATTG 60927 Query 476250 AACGTATGGTTGATGAAGC 476268 || ||||| | ||||| Sbjct 60928 AAAAGATGGTACAAGAAGC 60946 Score = 132 bits (146), Expect = 3e-25 Identities = 255/372 (69%), Gaps = 23/372 (6%) Strand=Plus/Minus Query 290635 AAAATCGTTAATAACAAAATTCATTATTTCATAATCAATATCTTCTCCACCCAAATAAGA 290694 ||| |||| |||| | | | || |||| | ||||| |||||||||||| | | | Sbjct 60122 AAATTCGTCTATAAAATATTCCAATATTCGTTGATCAAAATCTTCTCCACCAAGTGATGT 60063 Query 290695 ATTACCTGTCATAGCTAATGTTCTAAATAAACCGTCATTAATATT--CATTAATGAAATA 290752 |||||| | | ||| | ||| | ||| | ||||||| || | || ||| Sbjct 60062 ATTACCATTTGTTGCTTTCACTTCAAAAACACCTCC--TAATATTTCCAAAATAGATATA 60005 Query 290753 TCTAATGTTCCTGCACCAAAATCGTATATAATAACATTACCTCCATTTTTATTTGTCCA- 290811 || ||||| ||| | || ||||| |||| || || || | || |||| Sbjct 60004 TCAAATGTACCTCCTCCCAAATCATATA------------CTGCAATT--ACTTTTCCAT 59959 Query 290812 -AGTTTTGCTTCCAAGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTA 290870 | |||| |||||| ||| | | ||| | ||||||||||||||| || |||||||||| Sbjct 59958 CACTTTT--TTCCAAT-CCAAAGGCTAACGCAGCTGCTGTTGGTTCGTTAATAATTCTTA 59902 Query 290871 ATACATCAAGACCTGCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAA 290930 ||||| | |||||||||||| | | |||| ||||| || | || | ||| |||| Sbjct 59901 GAACATCTAATCCTGCAATTTTTCCTGCATCTTTTGTTGCTTGTCTCTGTGAATCGTTAA 59842 Query 290931 AATAAGCAGGGACTGTAATAACAGCtttttccactttctttttcaaataattttctgcca 290990 |||| ||||| || ||||||||||||| | ||||| || ||||||||||| || Sbjct 59841 AATATGCAGGAACAGTAATAACAGCTTGGTGTACTTTTCTTCCTAAATAATTTTCAGCAG 59782 Query 290991 tttgttttattt 291002 ||| ||| |||| Sbjct 59781 TTTCTTTCATTT 59770 Score = 123 bits (136), Expect = 2e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 474647 AAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCG 474706 ||| ||| ||| || |||||| | || ||||| | ||||||||| |||| || Sbjct 59727 AAAAAATATTCCCCTAGTCAAATTGGTGCATGTGTTTTGGAAAAAATGAAAGAAACTGCT 59786 Query 474707 AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAAT 474766 ||| | ||| | ||||| | || || ||||||||||| ||||||||||| Sbjct 59787 GAAAATTATTTAGGAAGAAAAGTACACCAAGCTGTTATTACTGTTCCTGCATATTTTAAC 59846 Query 474767 GATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGT 474826 ||||| || | |||||||| |||||||| |||| ||||||||| | ||||| || | Sbjct 59847 GATTCACAGAGACAAGCAACAAAAGATGCAGGAAAAATTGCAGGATTAGATGTTCTAAGA 59906 Query 474827 ATTATTAATGAACCAACAGCAGCCGC 474852 |||||||| |||||||||||||| || Sbjct 59907 ATTATTAACGAACCAACAGCAGCTGC 59932 >seq193 Length=461149 Score = 140 bits (154), Expect = 2e-27 Identities = 129/160 (81%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 ||||| || || |||||||| ||||||||||||||| | || ||| | ||||| |||||| Sbjct 298803 GATTTCTCTTCCCCAAATATAGCAAAGGAAATGCATGTAGGTCACCTAAGATCAACAATA 298744 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACA--AAGAATAA 817217 | || || | | |||||||| | |||||||| | | || |||||| |||| ||| Sbjct 298743 TTAGGAGATAGTATATGTAGAATTTTTGAATTTT-TAAAAGT-TAGTACAAGAAGAGTAA 298686 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAAT 817257 ||||| ||||||||||||||||||||||||||||| |||| Sbjct 298685 ATCATGTTGGTGATTGGGGAACACAATTTGGTATGATAAT 298646 >seq29 Length=163906 Score = 113 bits (124), Expect = 3e-19 Identities = 246/365 (67%), Gaps = 4/365 (1%) Strand=Plus/Plus Query 269142 TCTAGAGTGAGTTTTATCGCCCACCATTTGTTTTAAACGCTGATAATATGTCGGACCAAT 269201 ||||| || | ||||| | ||||| ||||| || | ||||||||| || |||||||| Sbjct 159722 TCTAGCATGTATCTTATCTTCTACCATATGTTTCAATCTCTGATAATAAGTAGGACCAAT 159781 Query 269202 AAATATTTTG-ACATGCATTTTTTCTCCCGTCATACCATTTGT-CATTGTTTCATTTCCC 269259 |||||||||| || | | || || || | || | |||| || | |||||||| Sbjct 159782 AAATATTTTGGACTTTAACATT--CTTCCATTATGTCCATTGTACAAAATATCATTTCCA 159839 Query 269260 CATGCTTCATATCCGTATGAAACTAGTTCATCATTTATTTTATTAATATCTACACCTGTA 269319 || ||||||||| || | || | | ||||| | | | || || | Sbjct 159840 TATTTTTCATATCCTAATTTATGTAATCTCTGCGATATTTCCTGTACAGTTATTTTTGAA 159899 Query 269320 AATGGTGTCGCATCACCATATACTCCTTTAATAGCACATACTTTTCCTAATAGACATTCA 269379 || || || |||||||| | | |||||| ||| || |||||| || || ||||||| Sbjct 159900 AAGGGAGTTGCATCACCTTCTCCTCCTTCAATTGCTGCTACTTTACCAGCTAAACATTCA 159959 Query 269380 ATCAATTGTCCAATGGTCATACGTTTTGGCATACAATTAGGATTAATAATAATATCTGGC 269439 | || |||||||| ||||| || || | || |||||| ||||| ||||| || Sbjct 159960 ACTAAATGTCCAATAGTCATTCGAGAAGGAACTGCATGAGGATTCATAATGATATCAGGG 160019 Query 269440 ACAAGTCCAGATTTAGTAAATGGCATATCTGCTCTATGAATTTTAAATCCAACTGTACCT 269499 | | |||| | |||||||||||||| || | || | ||| ||| | |||||| Sbjct 160020 AAAGTTCCATCACAACTAAATGGCATATCTTCTGTTCGATATGTAATTCCTATAGTACCT 160079 Query 269500 TTTTG 269504 ||||| Sbjct 160080 TTTTG 160084 >seq56 Length=96588 Score = 104 bits (114), Expect = 2e-16 Identities = 106/136 (78%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 753108 TTTAATTCATTATAATTTTCAATGATACCATTATGAACCATAGCTAATTTTTTATTT-TC 753166 |||||||| ||||||||||||| || |||||||| || ||| |||||| ||| || | Sbjct 6060 TTTAATTCTCTATAATTTTCAATTATTCCATTATGTACAATA-CTAATTCTTTCGTTGTA 6002 Query 753167 ATCAGTGTGGGGATGAGCATTTTCCACAGTTTTTTCACCATGTGTTGCCCATCTTGTATG 753226 ||| | || ||||| |||||||| ||||||| |||||||||||||||||||| || Sbjct 6001 ATCCATATGTGGATGCGCATTTTCGTCAGTTTTACATCCATGTGTTGCCCATCTTGTGTG 5942 Query 753227 CCCAACCGCTAAATTA 753242 ||| ||| |||| Sbjct 5941 TGCAATTCCTATATTA 5926 >seq49 Length=89902 Score = 98.7 bits (108), Expect = 6e-15 Identities = 154/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 330944 ATAAAATATGACATGGAGGAAGTGCCATTTTATTAATATCCACTGGATTCCATAAATTAA 331003 ||||||||||||| || || | ||||||||||| | |||| | ||||||| | | Sbjct 6862 ATAAAATATGACAAGGTGGTAATGCCATTTTATCCAGATCCTTTACATTCCATGCACACA 6803 Query 331004 TAATAATTCTTCTATCTGTCGGATTATTTTTAATTGCTTCGATACAtttttttAATTGAT 331063 ||||||||||||| ||| || | |||||| || | ||| ||||||| |||| Sbjct 6802 AAATAATTCTTCTACTTGTTGGTTCATTTTTTATCAAATTTATAATATTTTTTAGCTGAT 6743 Query 331064 CAATTCCTTGCCCGCTGTAATCTTTTTTACA-ATTTTCATATGTTGCACCAAAATATCTC 331122 ||||||||| |||| | | |||| |||| |||| || ||||||| |||| Sbjct 6742 CAATTCCTTTATTTTCATAAT-TATCATACATATTTGTATATTCAGCTCCAAAATGTCTC 6684 Query 331123 ATTTGGAAACCATATCCAGGACCTATATCACCTACATC 331160 ||| |||||||| |||||||| |||| ||| || Sbjct 6683 CATTGAAAACCATAAATAGGACCTAAATCATTTACCTC 6646 >seq24 Length=222344 Score = 95.1 bits (104), Expect = 8e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 482426 TAACTATGCGACAATTTACAGATTTGTGCGTATTATTAGGTTGTGATTATTGTGATAATA 482485 |||||||| |||||| |||||| || | |||| || |||||||||||||||| || Sbjct 10360 TAACTATGAATGAATTTATAGATTTCTGTATTTTATGTGGATGTGATTATTGTGATACTA 10301 Query 482486 TTAAGGGAATTGGCCCAAAAACTGCTTACAATAAAATTAAAGAATGTGGTAGTCTTGAAG 482545 | || || || || ||||||||||||| || ||||||||||| | || || ||||| Sbjct 10300 TAAAAGGTATAGGATCAAAAACTGCTTATAACCTAATTAAAGAATATAGTTGTATTGAAA 10241 Query 482546 AAGTAATTAA 482555 | | ||||| Sbjct 10240 ATATTATTAA 10231 >seq127 Length=300003 Score = 89.7 bits (98), Expect = 3e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 318636 TGTATTAATACCATTATCACCATAAACACATTGAATCAATTTATCATTAGCATTTCTTAC 318695 || || |||||||| || ||||| | | ||||||| | ||| || |||| | ||| Sbjct 14617 TGGATCAATACCATCTTCTCCATATAAAAATTGAATAATGGTATTATCTTCATTCCGTAC 14558 Query 318696 AGTACCATCATATTCCACTTTAATATCTTCTAGTATTTTAACTAATTTTCTTTGTACATA 318755 ||||||||||| | | ||| | ||| | ||||| ||| |||||| | || Sbjct 14557 TGTACCATCATAATGTAAAATAACAGATTCCATACATTTAATTAAGCATCTTTGAATGTA 14498 Query 318756 ACCTGTGTCTGCAGTTTTAATAGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTG 318815 ||| | | ||| ||||| | |||||||| |||| ||||||||| || | |||| || Sbjct 14497 ACCCGATTTTGCTGTTTTTACAGCAGTATCTATAAGACCTTCTCTCCCAGACATACAATG 14438 Query 318816 GAAAAAGAATTCAGCAGGTCCTAAACCTT 318844 ||||| |||| ||| | |||||||| Sbjct 14437 AAAAAAATATTCTTGAGGACGTAAACCTT 14409 >seq7 Length=68694 Score = 87.8 bits (96), Expect = 1e-11 Identities = 205/302 (68%), Gaps = 22/302 (7%) Strand=Plus/Minus Query 895170 TAAAAGATGTTGTCAAATTATGGGTCGAAAAGACGGAGATG--AATTATCTGTTTCTCAA 895227 ||||||||||| |||| ||||| |||| || || || | |||||| || ||||| Sbjct 48847 TAAAAGATGTTTAAAAATAATGGGACGAAGTGAAGGTGAAGATAATTAT-TG-CTCTCAG 48790 Query 895228 ATTATTTATCCTTGCATGCAAGTTGCAGATATTTTTGAACTCGAACCTGAAGGAATAGAT 895287 ||| |||| || || |||||| ||| ||||| ||| ||| || | | ||| Sbjct 48789 ATTCTTTACCCATGTATGCAATGTGCTGATATATTT-------TTCCTAAATG--TCGAT 48739 Query 895288 ATTTGTCAATTAGGTGTTGATCAACGTAAAGTTAATATGCTCGCTCTCGAATA---TGCC 895344 ||||| || |||||| |||||||| | ||||| || ||||| |||| || || || Sbjct 48738 ATTTGCCAGTTAGGTATTGATCAAAGGAAAGTAAACATGCTTGCTCGTGAGTACTGTGAT 48679 Query 895345 AAGAAAAATGGATTAAAAGTACCTGTTATACTATCACACCATATGTTA--ATGG-GATTA 895401 | ||||| || |||| |||| | || |||| || | |||||| | || ||| Sbjct 48678 ATAAAAAAAAGAAAAAAAAAACCTATAATTTTATCTCATGAAATGTTACCAGGGCTTTTA 48619 Query 895402 GGTGGACCTAAAAATAAAATGAGTAAATCCGATCCTAAATCGGCTATATTTATGGAAGAT 895461 | |||| || | |||||| || || ||| || || | || |||||||| ||| Sbjct 48618 GAAGGAC---AAGAAAAAATGTCCAAGTCAGATGAAAATTCTTCCATTTTTATGGATGAT 48562 Query 895462 TC 895463 || Sbjct 48561 TC 48560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268029754335632