Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016 -06-16] 3,484 sequences; 36,406,953 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq41 529 2e-145 seq68 197 2e-45 seq176 156 6e-33 seq177 154 2e-32 seq187 109 7e-19 seq113 89.7 7e-13 >seq41 Length=273930 Score = 529 bits (586), Expect = 2e-145 Identities = 1101/1631 (68%), Gaps = 15/1631 (1%) Strand=Plus/Minus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 ||| |||||||| || | ||||| || || || ||||||||||||||| |||||| Sbjct 235990 AGCCATTGGTATTGACCTTGGAACGACCTATTCCTGTGTTGGTGTATGGAGAAATGAGAA 235931 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 |||||| ||||| | |||||||| || ||| | || || |||||||||||||| ||||| Sbjct 235930 TGTAGATATTATTGCTAATGACCAGGGTAACAGAACTACCCCATCGTACGTTGCTTTTAC 235871 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 |||| || | | |||| ||||| ||||| ||||| |||| || ||| || Sbjct 235870 CGATACGGAGAGATTAATTGGTGATGCTGCAAAGAATCAAGTTGCTAGAAATCCTGAAAA 235811 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 || || ||||| || ||| | | ||||| | || ||| | || ||| || Sbjct 235810 CACAGTTTTTGATGCAAAGAGGTTAATTGGAAGGAAATTTACCGAATCTTCAGTACAGAG 235751 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 ||||| ||| | ||| | | | || | || ||| || || || |||||| | Sbjct 235750 TGATATGAAGCATTGGCCATTTACCGTAAAATCAGGATTGGAAGAGAAACCCATGATTGA 235691 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 ||| | || || ||||| ||| |||| || |||||||| || || ||||| || Sbjct 235690 AGTTACCTACCAAGGAGAGAAAAAATTATTTCACCCAGAAGAAATATCATCCATGGTTTT 235631 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 |||||||| || | ||| ||| | || |||| ||| || | || |||| ||| | Sbjct 235630 ACAAAAGATGAAAGAAAATGCTGAAGCCTTTTTGGGAAAATCTATTAAGAATGCTGTTAT 235571 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 ||||| |||||||| || | |||||| ||| |||| || |||||||| |||| |||| Sbjct 235570 TACTGTCCCTGCTTATTTTAATGATTCTCAAAGACAAGCAACAAAGGATGCTGGAACTAT 235511 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || || | || | | |||||||| || |||||||| || || || ||||||||||| Sbjct 235510 CGCAGGATTGAATGTTATGAGAATTATTAACGAACCAACTGCTGCAGCTATTGCTTATGG 235451 Query 195838 TCTGGACAAGAACAAGGACGAAG--ATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 | | ||| || ||||| | | | ||||| | || || || ||| | || |||||| Sbjct 235450 TTT--ACATAAAAAAGGAAAAGGTGAAAAAAACATTTTAATTTTCGATTTAGGAGGTGGT 235393 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || |||||||| || | | | ||| |||| ||||||||| ||||||||||| ||||| Sbjct 235392 ACCTTTGATGTATCTTTGTTAACTATAGAAGATGGTATATTTGAAGTAAAGGCAACTGCA 235333 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCT-GA 196014 || |||||||| |||| || |||||||| ||| || || | ||||| | || Sbjct 235332 GGAGATACTCACTTAGGAGGAGAAGATTTTGATA-ACAGATTGGTAAACTTTTGTGTAGA 235274 Query 196015 TGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCG 196071 || || |||| |||| || |||||| | || |||| ||| || | | | Sbjct 235273 AGATTTTAAGAGAAAAAATAGAGGAAAAGATTTATCAAAAAATAGTAGAGCATTGAGAAG 235214 Query 196072 GCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGT 196131 | || || |||||| | || ||||| || | ||||| | | ||| ||| | Sbjct 235213 ATTGAGAACCCAATGTGAGAGAGCAAAACGTACGTTGTCTTCATCTACCCAAGCAACTAT 235154 Query 196132 TGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTT 196191 || |||||||| | ||||| || ||||| | | | |||| ||| | | || | || Sbjct 235153 AGAAATTGATTCACTTTTTGAAGGTATTGATTACAGTGTAACTGTTAGCAGAGCTAGATT 235094 Query 196192 TGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCG 196251 ||||||||| ||| | || | | | | || || || |||| | Sbjct 235093 TGAAGAGTTGTGTATTGACTATTTCCGTGATACATTAGTTCCAGTCGAGAAAGTTTTAAA 235034 Query 196252 TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCG 196311 || |||| |||||||||| | || ||||| |||| | || || || ||||| | Sbjct 235033 AGATGCAATGATGGATAAGAAAAGTGTACATGAAGTTGTGTTAGTTGGTGGTTCAACAAG 234974 Query 196312 TATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAAT---AATAAAGATTTAAACAA 196368 ||||| || |||||| || || ||||| ||| || ||| || | Sbjct 234973 AATTCCAAAAATTCAAACATTGATTAAGGAATTCTTTAATGGAAAGGAAGCTTGTAG--- 234917 Query 196369 AACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTC 196428 | | || || || |||||||| |||||||||||||| || ||||| || || ||| | || Sbjct 234916 ATCAATAAATCCTGATGAAGCTGTTGCTTATGGTGCAGCTGTTCAAGCAGCCATTTTATC 234857 Query 196429 AGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCT 196488 ||||| | | |||| || |||||| | || || | ||||| || ||||| | Sbjct 234856 AGGTGATCAATCTAATGCTGTTCAAGATTTACTCCTGTTAGATGTATGTTCCTTATCCTT 234797 Query 196489 GGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCC 196548 ||| | ||||| || |||||||||||||| || | ||||| || || ||||| ||||| Sbjct 234796 AGGTTTAGAAACTGCAGGTGGTGTTATGACCAAGTTAATTGAGAGAAATACAACAATTCC 234737 Query 196549 GACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCA 196608 | || || ||| | ||| | || ||| | ||||||||||||||||| ||||| Sbjct 234736 AGCAAAAAAAAGTCAAATTTTTACTACATATGCTGATAATCAACCAGGTGTATTAATTCA 234677 Query 196609 AGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTT 196668 ||||| ||||||||| | | | || || ||| || | | |||| ||| || | Sbjct 234676 GGTATACGAAGGAGAAAGAGCATTAACTAAAGACAACAATTTGTTAGGAAAATTCCATCT 234617 Query 196669 GACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGA 196728 || |||||| ||||||| ||| || ||||| ||| | ||| |||||||| || Sbjct 234616 AGATGGTATTCCACCTGCACCAAGAAAAGTACCACAAATTGAAGTTACATTCGATATTGA 234557 Query 196729 CGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGAT 196788 |||||||| || |||| || ||||||| ||| || | |||| ||| | | || Sbjct 234556 TGCAAATGGTATATTAAATGTTACAGCTGTGGAAAAATCAACTGGTAAACAAAATCATAT 234497 Query 196789 TGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGA 196848 | ||||||||||| || || | | || || |||||||| ||||||||| | || Sbjct 234496 TACCATTACCAATGATAAAGGTAGATTATCACCAGAAGAAATTGATCGTATGGTTAATGA 234437 Query 196849 TGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATAAATGA 196908 || ||||| |||| | |||||| || | || ||||| || |||||| |||| Sbjct 234436 CGCTGAAAAATACAAAGCAGAAGATGAAGAGAATAAGAAAAGAATTGAAGCTAGAAATAG 234377 Query 196909 TCTAGAAAATT 196919 | |||| |||| Sbjct 234376 TTTAGAGAATT 234366 >seq68 Length=204961 Score = 197 bits (218), Expect = 2e-45 Identities = 461/691 (67%), Gaps = 17/691 (2%) Strand=Plus/Plus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 || ||||||||| | ||||| || ||| || |||||||| | |||| | | ||| Sbjct 45015 ATAGGTATCGATCTGGGAACAACCTACAGCTGCGTTGGTGTGTTCAAAAACGGAAGAGTA 45074 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 || ||| | || || | ||||||||||| || |||||||| || ||||| |||| Sbjct 45075 GAAATTTTGAACAACGAACTAGGAAACCGTATTACCCCATCGTATGTGTCCTTTGTAGAT 45134 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 || | |||||||| || || ||| || | | || |||| | | | || Sbjct 45135 GGAGAGAGAAAGGTTGGAGAGGCAGCCAAATTGGAGGCTACCTTGCACCCCACCCAAACG 45194 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541 || ||||| | || | ||||||||| | |||||| ||| || |||| | ||| Sbjct 45195 GTGTTTGATGTTAAAAGACTTATTGGTAGGAAGTTTGATGATCAGGAAGTTGTAAGGGAT 45254 Query 195542 ATAAAGGAC--TGGT--CTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 | |||| || | | || ||| | || | || | || || | || ||| Sbjct 45255 A----GGACATTGTTACCATACGAAATCGTAAACAATGAAG--GAAAACCAAAT-ATTCG 45307 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || | || | | | | || | ||||| || ||| ||||| | |||||||| Sbjct 45308 AGTCCAGATTAAGGATAAAAATACCACTTTTGCACCAGAACAAATTAGTGCAATGGTGTT 45367 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 |||||||| || | || |||| || |||||||| |||| ||| |||| || || Sbjct 45368 AGAAAAGATGAAAGAAATAGCTCAATCATTTTTGGGTAAACCTGTTAAAAATGCTGTGGT 45427 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || |||||||| || || | |||| ||||| | || || ||||| ||||||| | | || Sbjct 45428 TACAGTACCTGCCTATTTTAATGATGCACAAAGGCAAGCTACAAAAGACGCTGGTACCAT 45487 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 ||| ||| | ||| | | | || || || ||||||||||| ||||| | || || || Sbjct 45488 TGCAGGTTTGAACATTGTACGTATCATTAACGAACCAACAGCTGCTGCTTTGGCATACGG 45547 Query 195838 TCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTAC 195897 | | || || | | ||||| | || | |||| | | |||| | || ||||| || Sbjct 45548 TTTAGATAAAA------AAGAAGAAACAAGTATATTAGTATATGATTTAGGAGGTGGAAC 45601 Query 195898 GTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGG 195957 |||||||| || || | |||||| ||| |||| |||||| | || || ||||| Sbjct 45602 ATTTGATGTATCTATTTTAGTTATTGATAATGGAGTATTTGAAGTATACGCAACAGCTGG 45661 Query 195958 TGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 | |||||||| ||||||| |||||||||||| Sbjct 45662 TAATACTCATTTAGGTGGAGAAGATTTCGAT 45692 Score = 179 bits (198), Expect = 5e-40 Identities = 480/731 (66%), Gaps = 11/731 (2%) Strand=Plus/Plus Query 196190 TTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTT 196249 |||||||| ||||| ||| ||||| ||| | | | ||||| ||| | |||| | Sbjct 45894 TTTGAAGAATTAAATGATGACTTGTTCAGGGAAACTCTAGAACCAGTTAAGAAAGTTTTG 45953 Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309 ||| ||||| || ||| ||| | || |||||||| ||||| || || || || Sbjct 45954 GATGATGCAAAATATGAAAAGAGTAAAATAGACGAAATTGTACTTGTTGGTGGTTCTACA 46013 Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369 ||||| || || |||||||| || | || || || ||||| || | | Sbjct 46014 CGTATACCTAAAATTCAACAAATAATAAAAGATTTTTTTAACGGAAAAGAACCCAATAGA 46073 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 || ||||| |||||||| || || |||||||| || |||| |||| |||| ||| | Sbjct 46074 GGAATTAACCCTGATGAAGCCGTAGCATATGGTGCTGCTATTCAAGCTGGTATTATCTTA 46133 Query 196430 GGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTG 196489 |||| || | | || ||||| || | || | ||||| | ||| || | || Sbjct 46134 GGTG-----AAGAGTTAC----AAGATGTTGTATTATTAGATGTAACTCCCTTAACACTA 46184 Query 196490 GGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCG 196549 ||| | ||||||| |||||| |||||||| || ||||| | || || ||| |||||| Sbjct 46185 GGTATAGAAACAGTTGGTGGTATTATGACTCAACTTATTAAAAGAAATACAGTAATTCCG 46244 Query 196550 ACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAA 196609 || || || |||| ||||| || ||| ||||||||||||| ||| || ||| Sbjct 46245 ACAAAAAAATCACAAACATTTTCCACCTATCAAGATAATCAACCAGCTGTATTAATACAA 46304 Query 196610 GTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTG 196669 |||| |||||| ||| | | | |||||||| ||| | | |||| || || | Sbjct 46305 GTATTTGAAGGGGAAAGAGCATTAACTAAGGATAATCATTTGTTAGGAAAATTTGAACTA 46364 Query 196670 ACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGAC 196729 | || || ||| |||||| |||||||| || | || | || ||| | | || Sbjct 46365 TCTGGCATACCACCTGCACAAAGAGGTGTACCCAAAATAGAAGTAACATTCACTGTTGAT 46424 Query 196730 GCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATT 196789 |||||| || || | || ||| || || || | | || ||| | || ||| Sbjct 46425 AAAAATGGTATATTACATGTAGAAGCAGAAGATAAAGGAACAGGAAAAAGTAAAGGTATT 46484 Query 196790 GTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGAT 196849 ||||| ||||| || || | ||||| || || |||| ||| ||| || | ||| Sbjct 46485 ACCATTACAAATGATAAAGGTAGACTTTCAAAAGAACAAATAGAAAAAATGATTAACGAT 46544 Query 196850 GCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGA-AACAGATGAAAGCTATAAATGA 196908 || ||||| | || ||||| | || ||||| || | | |||||| |||| | Sbjct 46545 GCAGAAAAATTTGCAGATGAAGA-TAAAAATTTGAGAGAAAAAGTAGAAGCTAAAAATAA 46603 Query 196909 TCTAGAAAATT 196919 | |||| |||| Sbjct 46604 TTTAGATAATT 46614 >seq176 Length=118070 Score = 156 bits (172), Expect = 6e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || |||||||||||| | || ||||| || ||||| ||||| || || || ||| Sbjct 109211 ATGCAGATATTTGTGAAAACCTTGACGGGAAAGACCATCACGCTCGATGTAGAATCATCA 109270 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || || || ||||||||||||||||| |||||||||||||| Sbjct 109271 GACACCATTGAGAATGTAAAGGCGAAAATTCAAGATAAGGAAGGAATTCCACCCGATCAA 109330 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | || ||||| || ||||| | || |||||| | || | | ||||| ||| Sbjct 109331 CAAAGATTAATATTTGCAGGAAAACAATTAGAGGATGGAAGAACATTATCGGATTATAAC 109390 Query 172042 GTTCAAAAGGAGTCTACTCTACAC 172065 | || || || |||||| ||||| Sbjct 109391 ATCCAGAAAGAATCTACTTTACAC 109414 Score = 152 bits (168), Expect = 7e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || ||||||||| | || ||||| || |||||| | || |||||||| || Sbjct 109442 ATGCAGATATTCGTGAAAACCTTAACAGGAAAGACCATCACCTTGGATGTTGAGTCCTCG 109501 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | || || || ||||||||||||||||| |||||||||||||| Sbjct 109502 GATACGATTGAGAATGTAAAGGCGAAAATTCAAGATAAGGAAGGAATTCCACCCGATCAA 109561 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | || ||||| || ||||| | ||||||||| | || | | ||||| ||| Sbjct 109562 CAAAGATTAATATTTGCAGGAAAACAATTGGAAGATGGAAGAACATTATCGGATTATAAC 109621 Query 172042 GTTCAAAAGGAGTCTACTCTACAC 172065 | || || |||||||| || ||| Sbjct 109622 ATCCAGAAAGAGTCTACCCTGCAC 109645 Score = 138 bits (152), Expect = 1e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || ||||||||| | || ||||| || |||||| | || || || || || Sbjct 109673 ATGCAGATATTCGTGAAAACCTTGACAGGAAAGACCATCACCTTAGATGTAGAATCATCG 109732 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | || || || ||||||||||||||||| ||||||||||||||| Sbjct 109733 GATACTATTGAGAATGTAAAGGCGAAAATTCAAGATAAGGAAGGAATTCCACCCGATCAG 109792 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | || || || || ||||| | || |||||| | || | | ||||| ||| Sbjct 109793 CAAAGATTAATATTCGCAGGAAAACAATTAGAGGATGGAAGAACATTATCGGATTATAAC 109852 Query 172042 GTTCAAAAGGAGTCTACTCTACAC 172065 | || || || |||||| ||||| Sbjct 109853 ATCCAGAAAGAATCTACTTTACAC 109876 Score = 111 bits (122), Expect = 2e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 || ||||| |||||| | || |||||||| || || || || || || | || || || Sbjct 109007 GGTAAAACGATCACCTTGGATGTTGAGTCATCGGATACGATTGAGAATGTAAAGGCGAAA 109066 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 ||||| ||||||||||| || ||||| ||||||||| || | || ||||| || || || Sbjct 109067 ATTCAGGATAAGGAAGGAATACCACCTGATCAGCAAAGATTGATATTTGCGGGAAAGCAA 109126 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACA 172064 | |||||||| | || | ||||| ||| | |||||||| ||||| |||| Sbjct 109127 TTGGAAGATGGCAGAACATTATTGGATTATAACATCCAAAAGGAATCTACCTTACA 109182 >seq177 Length=178137 Score = 154 bits (170), Expect = 2e-32 Identities = 668/1048 (64%), Gaps = 9/1048 (1%) Strand=Plus/Plus Query 77940 TCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATA 77999 |||| || | ||| || | || | ||| | || || |||||||| ||| | ||||| Sbjct 42038 TCATAGAAAGACCACAGCATTTGATTATGAGAGTATCAATTGGTATACATTTAGATGATC 42097 Query 78000 TTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCACGCAACA 78058 | | | | | ||||| ||| || ||||| ||| ||| |||| || ||||| Sbjct 42098 TAGAAAAAGCATTAGAAACCTATCATCTGATGTCACAAAAATAT-TTTACACATGCAACG 42156 Query 78059 CCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACT-TGC 78117 || || || |||||| |||| || || | ||||| |||||||||||||| | || || Sbjct 42157 CCAACATTATTTAATTCAGGGACACCAAGACCACAAATGTCATCTTGTTTTTTGCTGTGT 42216 Query 78118 AAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTC 78177 | ||| | || |||||| | || || | | || | | | | |||||| ||| Sbjct 42217 ATGAAAGCA-GATTCTATTGAAGGAATTTTTGAAACATTAAAACAATGTGCTTTGATAAG 42275 Query 78178 TAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGAT 78237 ||| || |||||||| ||| | | || ||| | |||| | | || || || Sbjct 42276 TAAAACTGCAGGTGGTATTGGTGTAGCAGTACAAGATATACGTGGACAGAATTCATATAT 42335 Query 78238 TAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTAC 78297 ||||||||||||||| || | ||| | | || ||| | || || || || | ||| Sbjct 42336 AAGAGGAACTAATGGTATTTCAAACGGATTAGTACCAATGTTAAGAGTTTTTAACGATAC 42395 Query 78298 AGCACGCTATGTCAACCAAGCGGGTCG---TAGGAAGGGGTCATTCGCTATGTACCTTGA 78354 ||| | ||||| | |||| || | || || || ||||| || | || |||| Sbjct 42396 AGCTAGATATGTAGATCAAGGTGGAGGAAAAAGAAAAGGATCATTTGCAGTATATATTGA 42455 Query 78355 ACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGA 78414 ||| ||||| | || || | || ||| | || | | || || ||| | || || Sbjct 42456 ACCATGGCATTCAGACATATTTGAATTTCTAGATTTGAGAAAAAATCATGGTAAAGAAGA 42515 Query 78415 AGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGT 78474 | || || |||||||| |||| | ||| |||| ||| | |||||||| ||||| Sbjct 42516 ATTAAGAGCTAGAGATTTATTTTATGCTGTTTGGGTTCCAGATTTATTTATGAAAAGAGT 42575 Query 78475 TGAGGAAGGAGGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGT 78534 | ||||| || ||| || | | |||||| || | | ||| | || Sbjct 42576 TAAGGAAAATAAAAATTGGACTTTAATGTGTCCAAATGAATGTCCAGGTTTGAGTGAAAC 42635 Query 78535 ATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAA 78594 || || |||||||| |||||||| || || || ||||| ||| | | | | || Sbjct 42636 ATGGGGTGAAGAATTTGAAAAATTATATGAAAAGTATGAAGAAGAAAATTTAGGAAAAAA 42695 Query 78595 GACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCAC 78654 || | || || ||||| |||||| | ||||||| | || || || Sbjct 42696 AACTGTATTAGCTCAAGATTTATGGTTTGCTATTTTACAAAGTCAGATTGAAACAGGTGT 42755 Query 78655 CCCGTATATGCTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGT 78714 || || ||| | |||||||| ||||| || ||||| ||||| || ||||| Sbjct 42756 ACCATACATGTTGTACAAAGATTCATGTAATGCTAAATCTAATCAAAAAAATTTAGGTAC 42815 Query 78715 CATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACAC-GGATAAGAATGAAACAG 78773 || ||| | ||| || ||| ||||| | ||||| || | || ||||| | Sbjct 42816 AATTAAATGTAGTAATCTATGCTGTGAAATAATAGAATATACATCACCAG-ATGAAGTTG 42874 Query 78774 CTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACAT 78833 |||| ||||| ||| ||||| ||| || || ||||| || |||| ||| | Sbjct 42875 CTGTTTGTAACTTAGCATCTATTGCTTTATGTAAATTTGTAGACACAGAAAAAAAAGTTT 42934 Query 78834 TTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAA 78893 || ||| | ||| | | |||||||||||||| | || | ||||||| | | | Sbjct 42935 TTAATTTTAAAAAATTATATGAAATTACAAAAATTATTACGAGAAATTTAGACAAAATTA 42994 Query 78894 TTGACCGTAACTACTACCCAGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAA 78953 |||| | || || || || || || ||| | || || | || ||||||||||| Sbjct 42995 TTGAAAGAAATTATTATCCTGTTAAGGAAGCTGAGAGATCAAACAGGAGACATAGACCAA 43054 Query 78954 TTGGTCTAGGTGTTCAAGGATTGGCAGA 78981 | || | ||||| |||||||| || || Sbjct 43055 TAGGAATTGGTGTACAAGGATTAGCTGA 43082 >seq187 Length=410067 Score = 109 bits (120), Expect = 7e-19 Identities = 538/844 (64%), Gaps = 22/844 (3%) Strand=Plus/Minus Query 60175 TAATCACCAACCCGCTTTTCAAAGAAGTTTGTTTTACCATCCAACGAAATATTTTCCATA 60234 |||||| |||| || |||||||| ||||||||||| || | | ||||| ||||| Sbjct 75427 TAATCAGCAACACGTTTTTCAAAAAAGTTTGTTTTTCCTTGTAGAGAAATTAAATCCATC 75368 Query 60235 AAATCAAAGGGGTTCTTTGAATTCCAAATCGTTGGGTGTCCAACTTGTTTTAAAAGACGG 60294 ||| ||| || || |||| | |||| ||| || | || ||| | || Sbjct 75367 CAATTAAAAGGATTTTTTGCAAAAAAAATTTTTGAACAACCTAAACATTCTAATAATCGA 75308 Query 60295 TCAGACACGTATTCAATGTATTCCGACATCTTTTCGGAATTCATTCCTATGAGACTACAT 60354 || | || ||||||| || | ||||| | |||||||| || || | ||| Sbjct 75307 TCTGCTACAAATTCAATATACTGAGACATTAATCTTGAATTCATCCCAATTAAGTCACAA 75248 Query 60355 GGGAGTGCATCTAAAATAAAACCCTTTTCAATCTCAACAGCTTCTTTTATAATCGTATGA 60414 || || | || | || ||| | |||||| |||||||||||||||| ||| | | | Sbjct 75247 GGTAGAGATTCACATATGAAAGACCTTTCAACTTCAACAGCTTCTTTTACAATATTTTTA 75188 Query 60415 ATAATATCCTTTGAAGGTTTTTGTTGAAGCATATTAAATAATTCAACTG-CAAATTCTTG 60473 | || || | || |||| | || | | | || || ||| || | ||| ||| Sbjct 75187 ACAACTTCTTCTGGTAGTTTATTTTCTAATAAACTATAT-ATTAGACAGTTAAAATCTGT 75129 Query 60474 ATGAAGACCTTCGTCACGACTAATAAGTTCATTACTGAAACAAAGTCCGGGAAGTAGACC 60533 ||| | ||||| || | |||||| |||||||| || || |||||| | | | Sbjct 75128 ATGTAATCCTTCATCTCTACTAATTAGTTCATTGCTAAAGGTAAGTCCATGTAATTTGTT 75069 Query 60534 CCGCTTCTTTAACCAATATACAGCACAGAACGAACCACTGAAAAAGATACCCTCTACACA 60593 | || || |||||| | | ||||||||| |||||| || | ||||| || ||||| Sbjct 75068 TTGTTTTTTAAACCAAAAAATAGCACAGAAACTACCACTAAACAGTATACCTTCAACACA 75009 Query 60594 CGCAAACGCAAAAAGACGTTCAGCAAATGGTCTAGATTTGTCAAACCATTTCATGGCCCA 60653 ||| || | || | ||| ||||||| | | | | | |||||| ||||| Sbjct 75008 TGCATTTGCTACAATTCTTTCTGCAAATGAATTTGTATCATTTATCCATTTTGCTGCCCA 74949 Query 60654 TTCAGCCTT-TCGTTCGATACAAGGGATTGTTTGAATAGCTTGAAATAATTGT-----TT 60707 || || | || | | || || ||| |||||| |||||||| | | || Sbjct 74948 AAGTGCTTTATTCTTAACTGC-TGGTATATTTTCAATAGCATGAAATAAATTTAAACGTT 74890 Query 60708 CTTTTCCGAAGGGTCTTTGATATATTTGTCGATTAATTTACTATATGTTTCACCGTGAAC 60767 ||||| | ||||| ||||| ||||| || | | |||||||||||| || | Sbjct 74889 CTTTTTC-----ATCTTTTATATAATTGTCTATAAGTAAACTATATGTTTCTGAATGTAT 74835 Query 60768 CATTT-CGTTGTGACACTGATAACCATAAAAAGAACGAGCTTCGGAGGCTTGTACTTCAT 60826 ||| | || | ||| | ||||| |||||| | ||| || || | Sbjct 74834 ATTTTCCACTGCTA-TTTGAAATGAGTAAAATTTTTTAGCTTCTGTAATTTGAACCTC-T 74777 Query 60827 CTGCAAAA-TTATTGTTAATGTTTTCAAAAACAATTCCATCCGACCCAGCGAAGAATGCG 60885 || |||| ||| || | ||||| || || || ||||| | || || ||||| Sbjct 74776 CTTAAAAATTTACTGGCCAAATTTTCTAATACTATACCATCACTAGCTGCAAAAAATGCT 74717 Query 60886 AGTATGTATTTTATGAACTTCTGTTCGTTATCCGTTAATTGTACCCAATCTTCCATATCT 60945 | || | ||| || || | || ||| || || |||||| | | |||||| | ||| Sbjct 74716 AATACATGTTTAATAAAATGCTTTTCATTCTCATTTAATTTTTCAAAATCTTTTAAATCA 74657 Query 60946 TTTGATAAATCAATTTCTTCTGCCGTCC--AATTAGACATCTGGGCCTTCTTGTAAAGAT 61003 |||||||||| |||||||| || |||| ||| | | ||| || || || |||| || Sbjct 74656 CTTGATAAATCTATTTCTTCAGCTGTCCAAAATGATGCTTCT--GCTTTTTTATAAAAAT 74599 Query 61004 CCCA 61007 |||| Sbjct 74598 CCCA 74595 >seq113 Length=373552 Score = 89.7 bits (98), Expect = 7e-13 Identities = 224/333 (67%), Gaps = 18/333 (5%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 || ||||| || ||||| ||| || | || | || || | | || ||| | ||| Sbjct 59769 AAAATGAAAGAAACTGCTGAAAATTATTTAGGAAGAAAAGTACACCAAGCTGTTATTACT 59828 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| || || | |||||||| |||| || ||||| || || | ||||| Sbjct 59829 GTTCCTGCATATTTTAACGATTCACAGAGACAAGCAACAAAAGATGCAGGAAAAATTGCA 59888 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || | ||| |||||||| || ||||||||||| ||||| | || | ||| || Sbjct 59889 GGATTAGATGTTCTAAGAATTATTAACGAACCAACAGCAGCTGCGTTAGCCTTTGGATTG 59948 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGT-ATTG--ATCTTTGATCTCGGTGGTGGTACG 195898 || || ||| ||| ||| || |||| | | |||| | || || ||||| Sbjct 59949 GA----AAAAAG-----TGATGGAAAAGTAATTGCAGTATATGATTTGGGAGGAGGTACA 59999 Query 195899 TTTGATGTCTCACTTCT--CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 |||||| | || || | |||||| ||| ||| | || ||||| || || || || Sbjct 60000 TTTGATATATCTATTTTGGAAATATT--AGGAGGTGTTTTTGAAGTGAAAGCAACAAATG 60057 Query 195957 GTGATAC-TCATCTAGGTGGTGAAGATTTCGAT 195988 || |||| ||| || ||||| |||||||| ||| Sbjct 60058 GTAATACATCA-CTTGGTGGAGAAGATTTTGAT 60089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657833750092480