Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016 -06-16] 3,484 sequences; 36,406,953 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq29 87.8 2e-12 >seq29 Length=163906 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 193791 AAAATTTTTATAGGGCCAACTTATTATCATCGTCTTAAACATATGGTTAAGGATAAAATG 193850 ||||| ||||| || || ||||||||||| | | ||||||||||| | ||||| || Sbjct 159790 AAAATATTTATTGGTCCTACTTATTATCAGAGATTGAAACATATGGTAGAAGATAAGATA 159731 Query 193851 CATGCTAGAAGTCATGGACAAGTGACTA-CTTTACATCGACAACCAAATTGTGGTCGTTC 193909 |||||||||||| |||| | |||| |||| ||||||||| ||| | || Sbjct 159730 CATGCTAGAAGTAGAGGACCTTTAACTATGATTAC-GAGACAACCAACAGAAGGTAGATC 159672 Query 193910 TCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTAT 193954 || ||||||| | ||||||| |||||||| | |||||||| Sbjct 159671 AAGAGATGGAGGTCTCCGATTTGGGGAAATGGAAAGGGACTGTAT 159627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635149938015520