Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016 -06-16] 3,484 sequences; 36,406,953 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq41 610 5e-169 seq68 356 2e-92 seq113 205 7e-47 seq177 154 1e-31 seq29 122 7e-22 >seq41 Length=273930 Score = 610 bits (676), Expect = 5e-169 Identities = 1129/1625 (69%), Gaps = 66/1625 (4%) Strand=Plus/Plus Query 281297 TTTTTCTTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGA 281356 || |||| | |||| || ||| ||| || ||| || ||| ||| | ||||||| Sbjct 234401 TTATTCTCTTCATCTTCTGCTTTGTATTTTTCAGCGTCATTAACCATACGATCAATTTCT 234460 Query 281357 TCTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTT----GT 281412 ||| || ||||| || || ||| ||||| ||||||| || |||||| || Sbjct 234461 TCTGGTGATAATCTACCTTTATCATTGGTAATGGTAATATGATT----TTGTTTACCAGT 234516 Query 281413 TGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTC 281472 |||||| || | || || ||||| | |||||||| ||||| | ||| ||||| ||||| Sbjct 234517 TGATTTTTCCACAGCTGTAACATTTAATATACCATTTGCATCAATATCGAATGTAACTTC 234576 Query 281473 AATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATT 281532 |||||| || || ||| | |||||||| || || || | || ||| |||| | Sbjct 234577 AATTTGTGGTACTTTTCTTGGTGCAGGTGGAATACCATCTAGATGGAATTTTCCTAACAA 234636 Query 281533 ATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACA---GT 281589 ||| || |||||||| ||| || ||| || ||| | | || || ||| |||| | Sbjct 234637 ATTGTTGTCTTTAGTTAATGCTCTTTCTCCTTCGTATACCTGAAT--TAA-TACACCTGG 234693 Query 281590 TTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT 281649 ||||||||| | ||| || ||||| | | |||||| ||||||||||| ||||| Sbjct 234694 TTGATTATCAGCATATGTAGTAAAAATTTGACTTTTTTTTGCTGGAATTGTTGTATTTCT 234753 Query 281650 ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 281709 ||||| | |||||||||| |||||| || ||||||||||| | || | | | || Sbjct 234754 CTCAATTAACTTGGTCATAACACCACCTGCAGTTTCTAAACCTAAGGATAAGGAACATAC 234813 Query 281710 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACA---AGAATAGCTGC 281766 ||| | |||| | || ||||| ||| || |||| || | | ||| ||||| Sbjct 234814 ATCTAACAGGAGTAAATCTTGAACAG---CATTAGATTGATCACCTGATAAAATGGCTGC 234870 Query 281767 TTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAG----TT 281822 ||||| ||| |||||||| |||||||||||||||||||| | || || || || Sbjct 234871 TTGAACAGCTGCACCATAAGCAACAGCTTCATCAGGATTTA----TTGATCTACAAGCTT 234926 Query 281823 TTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTACCTTA-GGAATACGAGATGATC 281879 || ||||| ||| |||| | || || ||| | | || ||||| | | ||| | Sbjct 234927 CCTTTCCATT-AAAGAATTCCTTAATCAA--TGTTTGAATTTTTGGAATTCTTGTTGAAC 234983 Query 281880 CTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTT 281939 | |||||||| |||| |||||| || | ||||||| ||| ||| |||||||| Sbjct 234984 CACCAACTAACACAACTTCATGTACACTTTTCTTATCCATCATTGCATCTTTTAAAACTT 235043 Query 281940 TTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTC 281999 | || || || | | | | | || |||| ||| | ||||| ||| |||||| Sbjct 235044 TCTCGACTGGAACTAATGTATCACGGAAATAGTCAATACACAACTCTTCAAATCTAGCTC 235103 Query 282000 TAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTT 282059 | ||| ||| ||| | |||||||| ||||| || | ||||||| ||| || || | || Sbjct 235104 TGCTAACAGTTACACTGTAATCAATACCTTCAAAAAGTGAATCAATTTCTATAGTTGCTT 235163 Query 282060 GAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG 282119 | || || ||||| | | |||||| || | |||||| || || | ||||| || | Sbjct 235164 GGGTAGATGAAGACAACGTACGTTTTGCTCTCTCACATTGGGTTCTCAATCTTCTCAATG 235223 Query 282120 CTTT--TGCTGATTGATTCAAATCTGTTT---TATATTTTCTCTTGAAATCTTCAACACA 282174 || | | | ||||| |||||| || ||| ||||||||| |||||||| ||||| Sbjct 235224 CTCTACTATTTTTTGAT--AAATCTTTTCCTCTATTTTTTCTCTTAAAATCTTCTACACA 235281 Query 282175 CCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGC 282234 | |||| | | |||||||||||||| ||||| || | ||||| ||||| || || Sbjct 235282 AAAGTTTACCAATCTGTTATCAAAATCTTCTCCTCCTAAGTGAGTATCTCCTGCAGTTGC 235341 Query 282235 TCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACC 282294 |||||| || | |||||||| | || || | || |||||| ||| ||||| || Sbjct 235342 CTTTACTTCAAATATACCATCTTCTATAGTTAACAAAGATACATCAAAGGTACCACCTCC 235401 Query 282295 CATATCAAAAATAAGTACATTCATTTCT--TTGTCTTGGTTTTTATCAAGACCATACGCA 282352 | ||| ||||| | | || |||| || || | ||||||| | |||||| ||| Sbjct 235402 TAAATCGAAAATTAAAATGTTTTTTTCACCTTTTCCT--TTTTTATGTAAACCATAAGCA 235459 Query 282353 AAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCT 282412 | ||| |||||||||||||| ||||||||||||| |||||| | || || || |||| Sbjct 235460 ATAGCTGCAGCAGTTGGTTCGTTAATAATTCTCATAACATTCAATCCTGCGATAGTTCCA 235519 Query 282413 GCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCA 282472 ||||| || || ||||||||||| ||||| |||||||| ||||| ||||||||||| ||| Sbjct 235520 GCATCCTTTGTTGCTTGTCTTTGAGAATCATTAAAATAAGCAGGGACAGTAATAACAGCA 235579 Query 282473 TCTGTTACT-TCTTTTCCAATATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATC 282529 | | ||| | |||||| | | ||| |||| || ||| |||||| || ||||| | Sbjct 235580 T-TCTTAATAGATTTTCCCA-AAAAG-GCTTCAGCATTTTCTTTCATCTTTTGTAAAACC 235636 Query 282530 ATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAA 282589 || ||||| |||| |||||| | || || || ||| || | ||||||| Sbjct 235637 ATGGATGATATTTCTTCTGGGTGAAATAATTTTTTCTCTCCTTGGTAGGTAACTTCAATC 235696 Query 282590 TATGGTTTAT-TACCAA-CATTA-ATAACTTTAAATGGCCAATATTTCATA----TCTG- 282641 ||||| | | |||| | | | | || |||||||||||| |||||| |||| Sbjct 235697 ATGGGTTTCTCTTCCAATCCTGATTTTACGGTAAATGGCCAATGCTTCATATCACTCTGT 235756 Query 282642 ATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTAT 282701 | |||| | || || |||| | || |||||||| | ||||||||||||| || | Sbjct 235757 ACTGAAGA-TTCGG----TAAATTTCCTTCCAATTAACCTCTTTGCATCAAAAACTGTGT 235811 Query 282702 TGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT-TCTGTCTCT 282760 | ||||| ||| |||||| || || ||||| ||||| | || | || || || Sbjct 235812 TTTCAGGATTTCTAGCAACTTGATTCTTTGCAGCATCACCAATTA-ATCTCTCCGTATCG 235870 Query 282761 GTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACT 282820 ||||| | ||| || ||||| || || | ||||| || ||||| |||||||| || || Sbjct 235871 GTAAAAGCAACGTACGATGGGGTAGTTCTGTTACCCTGGTCATTAGCAATAATATCTACA 235930 Query 282821 TTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 282880 || ||||| ||||||||| ||||| | | || ||||| | ||||||||||| || Sbjct 235931 TTCTCATTTCTCCATACACCAACACAGGAATAGGTCGTTCCAAGGTCAATACCAATGGCT 235990 Query 282881 ATTTT 282885 || || Sbjct 235991 ATATT 235995 Score = 123 bits (136), Expect = 2e-22 Identities = 211/306 (69%), Gaps = 15/306 (5%) Strand=Plus/Plus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCAATGTTCTAAATACTCCA 86019 ||||||||||||||||| || || |||| || | |||| | | ||||| ||| Sbjct 235301 TCAAAATCTTCTCCTCCTAAGTGAGTATCTCCTGCAGTTGCCTTTACTTCAAATATACCA 235360 Query 86020 TTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTACG 86079 | | ||| | | || || ||||| || || ||| ||||||| || ||| | | | Sbjct 235361 TCTTCTATAGTTAACAAAGATACATCAAAGGTACCACCTCCTAAATCGAAAATTAAAATG 235420 Query 86080 TTACCACCAGtttttttA---TTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCT 86136 || ||||| | || | ||||| | | ||||| || |||| |||||| Sbjct 235421 TT---------TTTTTCACCTTTTCCTTTTTTATGT---AAACCATAAGCAATAGCTGCA 235468 Query 86137 GCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGA 86196 ||||||||||| ||||| ||| | | ||||| || || || || | ||| ||| Sbjct 235469 GCAGTTGGTTCGTTAATAATTCTCATAACATTCAATCCTGCGATAGTTCCAGCATCCTTT 235528 Query 86197 GTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATA 86256 ||||||||||| || | ||||||||||| || || ||||||||||| || || |||||| Sbjct 235529 GTTGCTTGTCTTTGAGAATCATTAAAATAAGCAGGGACAGTAATAACAGCATTCTTAATA 235588 Query 86257 GGTTTT 86262 | |||| Sbjct 235589 GATTTT 235594 >seq68 Length=204961 Score = 356 bits (394), Expect = 2e-92 Identities = 1069/1632 (66%), Gaps = 45/1632 (3%) Strand=Plus/Minus Query 281260 ATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTC 281319 |||||| ||||| | |||||||| || || || | || |||||| | ||| | Sbjct 46616 ATAATTATCTAAATTATTTTTAGCTTCTACTTTTTCTCTCAAATTTTTATCTTCATCTGC 46557 Query 281320 AAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT 281379 ||||| || || || |||||||| | || ||||| |||| || | ||| || || Sbjct 46556 AAATTTTTCTGCATCGTTAATCATTTTTTCTATTTGTTCTTTTGAAAGTCTACCTTTATC 46497 Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| |||||| || ||| |||| |||||| | || |||| | Sbjct 46496 ATTTGTAATGGTAATACCTTTACTTTTTCCTGTTCCTTTATCTTCTGCTTCTACATGTAA 46437 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 |||||||| ||| | | ||||| ||||| |||| || || ||||| || ||||| Sbjct 46436 TATACCATTTTTATCAACAGTGAATGTTACTTCTATTTTGGGTACACCTCTTTGTGCAGG 46377 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||| || || | | |||| |||| | || |||||| ||||| ||| || ||| Sbjct 46376 TGGTATGCCAGATAGTTCAAATTTTCCTAACAAATGATTATCCTTAGTTAATGCTCTTTC 46317 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAATAAGTTGTAAATAC 281616 || || || | ||| || ||| ||||| | ||||||||| ||| || | |||| Sbjct 46316 CCCTTCAAATACTTGTAT--TAA-TACAGCTGGTTGATTATCTTGATAGGTGGAAAATGT 46260 Query 281617 TCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 | |||||||| |||||| ||| ||||| | ||||| | |||||||||||||| Sbjct 46259 TTGTGATTTTTTTGTCGGAATTACTGTATTTCTTTTAATAAGTTGAGTCATAATACCACC 46200 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 | ||||||||| ||| || | | ||||| ||||| | || |||| || ||| | | Sbjct 46199 AACTGTTTCTATACCTAGTGTTAAGGGAGTTACATCTAATAATACAACATCTTGTAACTC 46140 Query 281737 TTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 ||| ||| | | |||| | ||||||||||||||||||||||| || ||||| Sbjct 46139 TTC---------ACCTAAGATAATACCAGCTTGAATAGCAGCACCATATGCTACGGCTTC 46089 Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856 |||||| |||| | ||| ||| ||| || || ||||||| | | | |||| Sbjct 46088 ATCAGGGTTAATTCCTCTATTGGGTTCTTTTCCGTTAAAAAAATCTTTTATTATTTGTTG 46029 Query 281857 TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 281916 | ||||| ||||| | || || ||||| | ||||||||| | | | || || Sbjct 46028 AATTTTAGGTATACGTGTAGAACCACCAACAAGTACAATTTCGTCTATTTTACTCTTTTC 45969 Query 281917 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGA 281976 ||||| ||| |||||||| | ||| ||||| ||| | || |||||||| Sbjct 45968 ATATTTTGCATCATCCAAAACTTTCTTAACTGGTTCTAGAGTTTCCCTGAACAAGTCATC 45909 Query 281977 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT-TCCTTCGAACA 282035 | | |||||| ||||| ||||| || | || | | | || | | ||||| | | Sbjct 45908 ATTTAATTCTTCAAATTTTGCTCTTGTTAATGTTTC-TGAAAAGCTGTGACCTTCTACAA 45850 Query 282036 AAGAATCAACTTCAATCGTAGTTTGAGTCGA-AGAAGATAGTGCACGTTTAGCACGTTCA 282094 | |||| |||||| | | |||||| | | ||||| | ||| ||| ||| Sbjct 45849 TATCTTCAATTTCAAT-TTGGGTTGAGTGTACAACAGATAAATTTCTTTTTGCAATTTCT 45791 Query 282095 CATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC--AAATCTGTTTTATATT 282152 | || | |||| | | | | ||| | || || ||| | ||| | ||| || Sbjct 45790 ACTTCTTTTCTTAATTTCTGAATAGCTCT--CTTATCACTTCTAAGATCAATGTTAGTTT 45733 Query 282153 TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATT--ATCAAAATCTTCACCTCC 282210 || |||| ||| || | | | || | || || || ||| |||||||| || || Sbjct 45732 TTTTCTTAAAAATTTTTATAAA--ATAGTCCATAACTCTTTGATCGAAATCTTCTCCACC 45675 Query 282211 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 282270 || | |||||| || | || || ||||| || | ||||| |||| | |||| Sbjct 45674 TAAATGAGTATTACCAGCTGTTGCGTATACTTCAAATACTCCATTATCAATAACTAAAAT 45615 Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330 || |||||| |||||||| || | |||| | | | || | | ||||| ||| Sbjct 45614 AGATACATCAAATGTTCCACCTCCTAAATCATATACTAATATACTTGTTTCT---TCT-- 45560 Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390 |||||||| | ||| || || ||||||||||| |||||||| ||||| || | | || Sbjct 45559 -TTTTTATCTAAACCGTATGCCAAAGCAGCAGCTGTTGGTTCGTTAATGATACGTACAAT 45501 Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 || | ||| ||||| | || || ||||| || ||||| ||||||| ||| |||||||| Sbjct 45500 GTTCAAACCTGCAATGGTACCAGCGTCTTTTGTAGCTTGCCTTTGTGCATCATTAAAATA 45441 Query 282451 TGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTG 282510 ||||| || |||| || |||| | | || ||| || | | | | ||| ||| Sbjct 45440 GGCAGGTACTGTAACCACAGCATTTTTAACAGGTTTACCCAAAAATGATTGAGCTATTTC 45381 Query 282511 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG-AATATTGCTTGGATTCAT 282569 |||||| || ||| | ||||| |||||||||||| | || | || | || Sbjct 45380 TTTCATCTTTTCTAACACCATTGCACTAATTTGTTCTGGTGCAAAAGTGGTATTTTTATC 45321 Query 282570 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC---TTTAAATGGCC 282626 || || || ||| || || |||| || || |||| | || || |||| Sbjct 45320 CTTAATCTG-GACTCGAATATTTGGT---TTTCCTTCATTGTTTACGATTTCGTATGGTA 45265 Query 282627 AATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTG 282686 | || || |||| | ||| || |||| ||| | |||||||| | || ||| Sbjct 45264 ACAATGTCCTATCCCTTACAACTTCCTGATCATCAAACTTCCTACCAATAAGTCTTTTAA 45205 Query 282687 CATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCA 282746 ||||||| | || | ||| || | | | ||| | |||||||||| ||||||| | Sbjct 45204 CATCAAACACCGTTTGGGTGGGGTGCAAGGTAGCCTCCAATTTGGCTGCCTCTCCAACC- 45146 Query 282747 GATGTTCTGTC--TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATT 282804 | ||| || ||| ||| || ||||| ||||| || | || || ||| | || || Sbjct 45145 -TTTCTCTCTCCATCTACAAAGGACACATACGATGGGGTAATACGGTTTCCTAGTTCGTT 45087 Query 282805 CGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAA 282864 | |||||| ||| | || |||| | ||||| || || || | |||||||| | Sbjct 45086 GTTCAAAATTTCTACTCTTCCGTTTTTGAACACACCAACGCAGCTGTAGGTTGTTCCCAG 45027 Query 282865 ATCAATACCAAT 282876 ||| ||||| || Sbjct 45026 ATCGATACCTAT 45015 Score = 134 bits (148), Expect = 1e-25 Identities = 212/302 (70%), Gaps = 15/302 (5%) Strand=Plus/Minus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCAATGTTCTAAATACTCCA 86019 || ||||||||||| || ||||| ||||||||| || ||| || | |||||||||| Sbjct 45691 TCGAAATCTTCTCCACCTAAATGAGTATTACCAGCTGTTGCGTATACTTCAAATACTCCA 45632 Query 86020 TTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTACG 86079 || ||| | | || ||||| ||||| ||| ||||||| ||||| || | || Sbjct 45631 TTATCAATAACTAAAATAGATACATCAAATGTTCCACCTCCTAAATCATATACTAATA-- 45574 Query 86080 TTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCA 86139 ||| || ||| ||| ||||| | ||||||||||||| | ||| || || Sbjct 45573 -TAC-------TTGTTTCTTC--TTTTTTAT---CTAAACCGTATGCCAAAGCAGCAGCT 45527 Query 86140 GTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTT 86199 |||||||| ||||| || | || | ||||| ||||| || ||| || || Sbjct 45526 GTTGGTTCGTTAATGATACGTACAATGTTCAAACCTGCAATGGTACCAGCGTCTTTTGTA 45467 Query 86200 GCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATAGGT 86259 ||||| || ||||| ||||||||||| || ||||| |||| || || || |||| |||| Sbjct 45466 GCTTGCCTTTGTGCATCATTAAAATAGGCAGGTACTGTAACCACAGCATTTTTAACAGGT 45407 Query 86260 TT 86261 || Sbjct 45406 TT 45405 >seq113 Length=373552 Score = 205 bits (226), Expect = 7e-47 Identities = 716/1097 (65%), Gaps = 53/1097 (5%) Strand=Plus/Minus Query 281445 CATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGA 281504 |||| ||||| | |||||| || ||||||||||| ||||| ||||| | || ||||| | Sbjct 60834 CATTTGCATCTACATCAAAGGTAACTTCAATTTGTGGGACTCCTCTAGGTGCGGGTGGAA 60775 Query 281505 TCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCT 281564 | || | || | ||||| || | | |||||||| ||| | || || |||||| | Sbjct 60774 TACCAACTAAGTCAAATGAGCCTAACATTTTATTATCGCTAGCCATTTCTCTTTCACCTT 60715 Query 281565 CGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATT 281624 | | || |||| ||||| ||||||||||| | |||| |||| | |||| Sbjct 60714 GATATACTTTGATACTAACTTGTGTTTGATTATCAGCTGCTGTTGAGAATATTTGAGATT 60655 Query 281625 TTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTT 281684 |||| || ||||| || ||||| | ||| | || || | || |||||| ||||| Sbjct 60654 TTTTTGTTGGGATTGTCGTATTTCTGTTAATCAGTTTTGTGAAAACACCACCTAATGTTT 60595 Query 281685 CTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAG 281744 ||| ||| | || | ||| | ||||| | ||| | || |||| ||| || Sbjct 60594 CTATACCTAACGATAAGGGAATAACATCCAATAGTA----AT----AAGTCTTTTAT--- 60546 Query 281745 TTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 281804 || || | | | || |||| ||||| ||||| |||| || ||||||||||||| Sbjct 60545 -TTCTCCTTTTAATACACCTCCTTGTATAGCTGCACCTAATGCTACTGCTTCATCAGGAT 60487 Query 281805 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGA-AGTTGTCT--TACCT 281861 ||||| ||| | | | || |||||| | |||| | |||| ||| ||||| Sbjct 60486 TAACACTTTTCGATGGACTGTT----TTGAAATA-TTTGTTTTACAGTT-TCTGATACCT 60433 Query 281862 TAGGAATACGAGATGAT-CCTCCAACTAATACAATTTCATGCACCT-GTGATT-TATCCA 281918 | || || | | | || || ||||| | | |||||||| | | || || | | || Sbjct 60432 TTGGCATTCTTG-TCATACCACCAACAAGGATAATTTCATTAATTTCGTCCTTCTTTACA 60374 Query 281919 GTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAAC 281978 |||| ||| || | |||||| ||||| | | || | ||||| || || Sbjct 60373 --TTTGCATCTTTTATACACTTTTCACATGGTTCTATAGTTCCTTTTAACAAATCATGAC 60316 Query 281979 AAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATT---CCT------- 282028 | | |||||| ||||| || ||||| | | | | ||| || ||| Sbjct 60315 ATAATTCTTCTAATTTTGCCCTAGTTAACTTAATCTGTAAATGTTTTGGTCCTGTTTGAT 60256 Query 282029 TCGAACAAAGAATC---AACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTA 282085 | | | || || || || | | | ||||| || ||||||| || ||| Sbjct 60255 TTGCAGTAATAAAAGGTAAATTAATTTCT-GTTTGGGTTTTGCTAGATAGTTCAATTTTG 60197 Query 282086 GCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT-TTGCTGATTGATTCAAATCTGT 282144 || ||| |||| |||| ||| |||| ||| || | ||| ||||||||| | Sbjct 60196 GCTGTTTCTGCTGCTTCTCTTAATCTCTGTAAAGCTAATTTATCATTC-TTCAAATCTAT 60138 Query 282145 TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATTATCAAAATCT 282202 | | ||| |||| || || || | | | || || ||| | || | |||||||||| Sbjct 60137 ATGTTCCTTTTTCTTAAATTCGTCTATAAA--ATATTCCAATATTCGTTGATCAAAATCT 60080 Query 282203 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGA 282262 || || || | | ||||| || || ||| | |||| |||| || || | Sbjct 60079 TCTCCACCAAGTGATGTATTACCATTTGTTGCTTTCACTTCAAAAACACCTCCTAATATT 60020 Query 282263 GACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 282322 ||||| || | |||| || || || |||| |||| | | | || ||| || Sbjct 60019 TCCAAAATAGATATATCAAATGTACCTCCTCCCAAATCATATAC---TGCA---ATTACT 59966 Query 282323 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 282382 || | | |||| || | ||| | || || ||||| || |||||||| ||||||||| Sbjct 59965 TTTCCATCACTTTTTTCCAATCCAAAGGCTAACGCAGCTGCTGTTGGTTCGTTAATAATT 59906 Query 282383 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 282442 || | ||||| | || |||||| ||||||||||||| || |||||||| ||||||||| Sbjct 59905 CTTAGAACATCTAATCCTGCAATTTTTCCTGCATCTTTTGTTGCTTGTCTCTGTGAATCG 59846 Query 282443 TTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTT 282502 |||||||||||||||||||||||||| || | ||||| | |||| | |||| Sbjct 59845 TTAAAATATGCAGGAACAGTAATAACAGCTTGGTGTACTTTTCTTCCTAAATAATTTTCA 59786 Query 282503 GCTGTTTGTTTCATTTT 282519 || |||| ||||||||| Sbjct 59785 GCAGTTTCTTTCATTTT 59769 Score = 114 bits (126), Expect = 1e-19 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 86131 GCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAA 86190 || ||||| |||||||| ||||| ||| | ||||||||||| || |||||||| | | | Sbjct 59932 GCAGCTGCTGTTGGTTCGTTAATAATTCTTAGAACATCTAATCCTGCAATTTTTCCTGCA 59873 Query 86191 TCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTT 86248 || |||||||||||||||| || ||||||||||| || ||||||||||| |||| Sbjct 59872 TCTTTTGTTGCTTGTCTCTGTGAATCGTTAAAATATGCAGGAACAGTAATAACAGCTT 59815 >seq177 Length=178137 Score = 154 bits (170), Expect = 1e-31 Identities = 1028/1623 (63%), Gaps = 70/1623 (4%) Strand=Plus/Plus Query 162903 TATAATTTTATTAAAAAACATATCAAAGAGATTAA-TAGAGTTATTAGATATGATCGTGA 162961 ||| ||||||||| | |||| | ||||||| || || ||| ||| ||||| Sbjct 41911 TATGATTTTATTATGCAGCATAAGGAT-AGATTAAATAAAGAGATTGATTATACACGTGA 41969 Query 162962 TTATAATCTAACCATT--TTCGGATTCAGGACTCTAGAAAAATCTTATCTTAAAAGAATC 163019 || ||| ||| | ||| || || || | || |||||| ||| ||| | | | || Sbjct 41970 TTTTAA-CTA-CGATTACTTTGGTTTTAAAACGTTAGAAAGATCATATTTATTACGTATT 42027 Query 163020 AACaaaaaaaTTGTTGAACGTCCTCAACATTTATTTATGAGAGTAGCTATTACACTCCAT 163079 || || ||||| | ||| | || || ||||| ||||||||||| | ||| | ||| Sbjct 42028 AATAATAAAATCATAGAAAGACCACAGCATTTGATTATGAGAGTATCAATTGGTATACAT 42087 Query 163080 TACAGGAAAAATGATCTCGACAGGATATTTGAAACTTATAAATATTTATCTAAAGGATAT 163139 | | ||||||| || | ||| ||||| ||| | | || || |||| Sbjct 42088 TT------AGATGATCTAGAAAAAGCATTAGAAACCTATCATCTGATGTCACAAAAATAT 42141 Query 163140 TTTACTCACGCAACACCTACATTATTTAATGCTGGTACAACACATGAACAACTTTCAAGT 163199 ||||| || ||||| || |||||||||||| | || ||| || |||| | ||| | Sbjct 42142 TTTACACATGCAACGCCAACATTATTTAATTCAGGGACACCAAGACCACAAATGTCATCT 42201 Query 163200 TGTTTTTTATTGGGTAT---TGGTGATTCTCTTGAAGAAATCAGTGAATGTTGGAAAGAA 163256 |||||||| || |||| | |||||| |||||| ||| |||| | ||| || Sbjct 42202 TGTTTTTTGCTGTGTATGAAAGCAGATTCTATTGAAGGAATTTTTGAAACATTAAAACAA 42261 Query 163257 TGTGCTTTAATCAGTAAACATGCAGGAGGAATTGGAATACATATGACTAATATTAGAGTT 163316 |||||||| || |||||| |||||| || ||||| || | || || || || Sbjct 42262 TGTGCTTTGATAAGTAAAACTGCAGGTGGTATTGGTGTA-GCAGTAC-AAGATATACGTG 42319 Query 163317 GAAGGA--GCATATATAGCTTCAACACAAGGAGAAGCAGGTGGTT---TAAGAGTTTTGA 163371 || || |||||||| ||| | || || || | || | | || | Sbjct 42320 GACAGAATTCATATATAAGAGGAACTAATGGTATTTCAAACGGATTAGTACCAATGTTAA 42379 Query 163372 CTATTTTCAATGATATTTCAAGATACGCAAATCAAGGT---GGTAAACGACCCGGTTCTT 163428 |||| || |||| | ||||| | | |||||||| || ||| || || || | Sbjct 42380 GAGTTTTTAACGATACAGCTAGATATGTAGATCAAGGTGGAGGAAAAAGAAAAGGATCAT 42439 Query 163429 TTGCTATTTTTATTGAACCGTGGCATGGAGACATATTCTTTTTTCTTGATCTCAAGAAAA 163488 |||| | | ||||||||| |||||| ||||||||| ||||| ||| | | |||| Sbjct 42440 TTGCAGTATATATTGAACCATGGCATTCAGACATATTTGAATTTCTAGATTTGAGAAAAA 42499 Query 163489 ATACTGGAGCAGAAACAGAAAGAGCCAGAGATTTATTTT-TG-GGTTTGATGATTAATGA 163546 || ||| |||| | |||||| ||||||||||||| || ||||| | || || Sbjct 42500 ATCATGGTAAAGAAGAATTAAGAGCTAGAGATTTATTTTATGCTGTTTG--GGTTCCAGA 42557 Query 163547 CATTTTCATGGAAAGAGTTTATAAAGACGATGTTTGGTCATTAATGTGTCCGTCTCAATG 163606 | || ||| |||||||| | || | | |||| | ||||||||||| | |||| Sbjct 42558 TTTATTTATGAAAAGAGTTAAGGAAAATAAAAATTGGACTTTAATGTGTCCAAATGAATG 42617 Query 163607 TCCTAATCTTCTCAATAAATACGGAGACGAATTCACCAAAGAATATCTTAAATATGAAAG 163666 ||| | | | | || || || ||||| ||| |||| || |||||| Sbjct 42618 TCCAGGTTTGAGTGAAACATGGGGTGAAGAATTTGAAAAATTATATGAAAAGTATGAA-- 42675 Query 163667 TGAAGGTATTTATTTGAAACAAA----TAAGAGCTATTGATTTATGGTT--CAAGATTAT 163720 |||| | || | |||| ||| || |||| ||||||||||| | | ||| Sbjct 42676 -GAAGAAAATT-TAGGAAAAAAAACTGTATTAGCTCAAGATTTATGGTTTGCTATTTTAC 42733 Query 163721 GGAGTCACAAATTGAGACAGGAGTTCCGTATGTTATGTTCAAAGATGCGATCAATGACAA 163780 ||| || ||||| ||||| || || || | ||| ||||||| | |||| || Sbjct 42734 AAAGT--CAGATTGAAACAGGTGTACCATACATGTTGTACAAAGATTCATGTAATGCTAA 42791 Query 163781 ATCAAATCAAATTAATATTGGTGTTGTTAATGGTTCAAATTTATGTTGTGAAATTGTGGA 163840 ||| ||||||| ||| | ||| |||| || ||| |||| |||||||| | || Sbjct 42792 ATCTAATCAAAAAAATTTAGGTACAATTAAATGTAGTAATCTATGCTGTGAAATAATAGA 42851 Query 163841 AGTATCCGACA-AAAATAATTTCTCAGTATGTAATTTATCATCAATTTGTCTGCCGAGAT 163899 | ||| | || | || | | | || ||||| ||| |||| ||| | | | || Sbjct 42852 A-TATACATCACCAGATGAAGTTGCTGTTTGTAACTTAGCATCTATTGCTTTATGTAAAT 42910 Query 163900 TTGTTAAAATTATTGATGAAGTCCCAACTTTCAATTACCAAAAATTATTCAAGATTAGTC 163959 |||| | | | |||| ||| |||| ||||||||| | |||| Sbjct 42911 TTGTAGACACAGAAAAAAAAGT------TTTTAATTTTAAAAAATTATATGAAATTACAA 42964 Query 163960 GTATTCTCACTCGCAATCTCAATAATATTATTGACATTAATTTCTATCCTCTCGATAAAA 164019 ||| | || | ||| | | || |||||||| | |||| |||||| | | || Sbjct 42965 AAATTATTACGAGAAATTTAGACAAAATTATTGAAAGAAATTATTATCCTGTTAAGGAAG 43024 Query 164020 CTCGGATTACCAATCTTCGTGATCGTCCTATTGGTATTGGAGTTCAGGGATTGGCTGATG 164079 || || | || | || | || || || ||||| || || ||||| ||||| Sbjct 43025 CTGAGAGATCAAACAGGAGACATAGACCAATAGGAATTGGTGTACAAGGATTAGCTGACA 43084 Query 164080 TATTTGCCATG--TTTAAGA-CTCCTTTTGATTCGGAAATTGCTCGTGATCTCAATCGTA 164136 |||| ||| ||||||| ||||| || || || || || | ||| | Sbjct 43085 CATTT---ATGCTTTTAAGATATCCTTACGAATCAGATGAAGCAAAAGAATTAAATAAAA 43141 Query 164137 AAATTTTCGAAACAATTTATTATGGAGCTTTAACAGAATCCAATAAACTTGCTAGAGAAT 164196 |||||| ||||| || || |||| || ||| | || | || | |||| | | Sbjct 43142 GAATTTTTGAAACTATGTACTATGCTGCATTAGAAATGTCTATGGAATTAGCTAAAATTT 43201 Query 164197 TTGGTACATATCAAACTTATCAAGGAAGTCCTATTTCTCAAGGAAAATTCCAATTTGATC 164256 ||| | |||| || ||||| |||| ||||| | ||||| | | || |||||| Sbjct 43202 ATGGGAAATATGAATCTTATGAAGGTAGTCCAGCTAGCCAAGGTATTCTTCAGTTTGATA 43261 Query 164257 TTTGGAATTTCGA--TAAATCACAATTGAGCGGAATGTGGGATTGGGAACTTTTGCGTCA 164314 | |||||| || | | || |||| | | ||||| ||| || |||||| | Sbjct 43262 TGTGGAATATCAAAGTTGATAACAAAT-ACTGGAAT-TGGAAT---GAACTT---AAAGA 43313 Query 164315 AGAAATTTTAAATCATGGTGTTCGTAATAGTCTAGTTACAACCTGTATGCCAACTGCAAG 164374 | ||||| ||| ||||| | | ||| || || | | |||||| |||||| Sbjct 43314 AAAAATTAAAAAACATGGACTAAGGAATTCCTTACTTTTAGCACCTATGCCTACTGCATC 43373 Query 164375 TACTTCTCAAATTATGGGATGGAATGAATGTATTGAACCTTATACAGAAAATATTTATTC 164434 |||||| ||||| | ||| ||||||| | ||||||| || || |||||||| | Sbjct 43374 TACTTCACAAATATTAGGAAACAATGAATCTTTTGAACCATACACTAGCAATATTTACTA 43433 Query 164435 AAGA--AGTACTATGGCTGGAGAATATTTTGTGATTAATAAACATCTCATAAAAGATCTT 164492 ||| |||||| | |||||||| || || | ||| ||| | | ||||| ||| Sbjct 43434 CAGAAGAGTACTCAG--TGGAGAATTCTTCGTTGTCAATCCTCATTTACTTAAAGA-CTT 43490 Query 164493 ATT 164495 ||| Sbjct 43491 ATT 43493 >seq29 Length=163906 Score = 122 bits (134), Expect = 7e-22 Identities = 265/386 (69%), Gaps = 12/386 (3%) Strand=Plus/Plus Query 68851 CTTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGTCGGACCAATAAAAATTTT-AA 68909 ||| || ||||||| |||||||||||||||||||| || ||||||||||| ||||| | Sbjct 159734 CTTATCTTCTACCATATGTTTCAATCTCTGATAATAAGTAGGACCAATAAATATTTTGGA 159793 Query 68910 CTGGTAATTTTTTACCATTCATTCCATTATACATAGTTTCATTACCCCATTCTTCATAAC 68969 || ||| || | ||||| |||||| |||| | | ||||| || ||| |||||| | Sbjct 159794 CT-TTAACATTCTTCCATTATGTCCATTGTACAAAATATCATTTCCATATTTTTCATATC 159852 Query 68970 CAGCAGCAACTAAT-TCATCGTTAATGGCATTA-AGATCAACACTTGTAAATGGTGTTGC 69027 | | |||| || || || | | || || | | ||| ||| || ||||| Sbjct 159853 CTAATTTATGTAATCTCTGCGATATTTCCTGTACAGTT--ATTTTTGAAAAGGGAGTTGC 159910 Query 69028 ATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAATAAACATTCAATAAGTTGCCC 69087 ||| || | |||||| || ||| || ||| || ||||||||||| | || || Sbjct 159911 ATCACCTTCTCCTCCTTCAATTGCTGCTACTTTACCAGCTAAACATTCAACTAAATGTCC 159970 Query 69088 AATAGTCATACGTTTGGGCATACAATTAGGATTGATAATAATATCGGGAATTAATCCAGA 69147 ||||||||| || || | || |||||| ||||| ||||| || | |||| Sbjct 159971 AATAGTCATTCGAGAAGGAACTGCATGAGGATTCATAATGATATCAGGGAAAGTTCCATC 160030 Query 69148 TTTACTGAATAACATATCTGCTCGATGAGCTTTGTA--TCCAATGGTACCTTTTTGACC- 69204 ||| ||| ||||||| || | | | |||| ||| || ||||||||||| || Sbjct 160031 ACAACTAAATGGCATATCT--TCTGTTCGATATGTAATTCCTATAGTACCTTTTTGTCCA 160088 Query 69205 TGCTCTTGACGAAAATTTATCACCTA 69230 ||| || | |||||||||||||| Sbjct 160089 TGC-CTACTTGCAAATTTATCACCTA 160113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740459350323384