Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016
-06-16] 3,484 sequences; 36,406,953 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq176 107 1e-18
>seq176
Length=118070
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | || ||||| || || || || ||| || || ||||||||||| ||
Sbjct 109668 CCTCCTCTTAATCGTAACACTAAGTGCAGGGTAGACTCTTTCTGGATGTTATAATCCGAT 109609
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||||| | ||||| | |||||| || ||||||||||| | ||||| || || ||
Sbjct 109608 AATGTTCTTCCATCTTCCAATTGTTTTCCTGCAAATATTAATCTTTGTTGATCGGGTGGA 109549
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||| ||| ||| ||| | || || | ||| || || | ||| ||
Sbjct 109548 ATTCCTTCCTTATCT-TGAATTTTCGCCTTTACATTCTCAATCGTATCCGAGGACTCAAC 109490
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| ||| || || || || ||||| |||||||| || ||||||||
Sbjct 109489 ATCCAAGGTGATGGTCTTTCCTGTTAAGGTTTTCACGAATATCTGCAT 109442
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | || || || || || | ||| || || || ||||||||||| ||
Sbjct 109437 CCTCCTCTTAATCGTAAGACTAAGTGTAAAGTAGATTCTTTCTGGATGTTATAATCCGAT 109378
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||||| | || || | |||||| || ||||||||||| | ||||| || || ||
Sbjct 109377 AATGTTCTTCCATCCTCTAATTGTTTTCCTGCAAATATTAATCTTTGTTGATCGGGTGGA 109318
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||| ||| ||| ||| | || || | ||| |||||| || ||
Sbjct 109317 ATTCCTTCCTTATCT-TGAATTTTCGCCTTTACATTCTCAATGGTGTCTGATGATTCTAC 109259
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || || || || || || || ||||||||||| ||||||||
Sbjct 109258 ATCGAGCGTGATGGTCTTTCCCGTCAAGGTTTTCACAAATATCTGCAT 109211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314716236187772
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |