Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088545.1_202016
-06-16] 3,484 sequences; 36,406,953 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq177 453 2e-122
seq187 246 4e-60
>seq177
Length=178137
Score = 453 bits (502), Expect = 2e-122
Identities = 1141/1708 (67%), Gaps = 46/1708 (3%)
Strand=Plus/Minus
Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982
||||| |||||||| || | |||||| ||||| | || ||| ||||||| ||||||
Sbjct 43667 TGATCAATGAAAGCACCACGATCAGCGGCCATATCGATGATGTTCTTTTGCTTGATTTCC 43608
Query 76983 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTT---TG-TATTTTGAATGGA 77038
|||| |||||| | | || || | || ||| | || || ||| ||||
Sbjct 43607 CAAACGGTTTTGTATAGTTCCTTAAGGTC-TCTAGGTATTTCACTGATATACTGAAC--- 43552
Query 77039 ACCACCATC-TGAT--ATAATTGTATTCTTT-ATATCATCATTCCACAATTTCCTCTCTG 77094
|| ||||| ||| |||| | | || ||| || || |||| ||| | | | ||
Sbjct 43551 ACTACCATTGTGAGCAATAAGT-TGTTGTTTCATGTCTTCATCCCAGAGTCCACGATCGA 43493
Query 77095 TTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAG 77154
||| || |||| | ||||||||| || | ||||||||| | |||||| |
Sbjct 43492 ATAAGTCTTTAAGTAAATGAGGATTGACAACGAAGAATTCTCCACTGAGTACTCTTCTGT 43433
Query 77155 TGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAG 77214
||||||||| || || |||||||| | ||||||||||||||| || ||||| | |||||
Sbjct 43432 AGTAAATATTGCTAGTGTATGGTTCAAAAGATTCATTGTTTCCTAATATTTGTGAAGTAG 43373
Query 77215 AAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTAT 77274
| ||||| ||||||||||| | | ||| ||| || || |||||| || | ||||| |
Sbjct 43372 ATGCAGTAGGCATAGGTGCTAAAAGTAAGGAATTCCTTAGTCCATGTTTTTTAATTTTTT 43313
Query 77275 CTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTA-CAAC------ATCCCAAAGATCG 77327
|||| || | ||||||| ||| || || || |||| || ||| | |||
Sbjct 43312 CTTTAAGTTCATTCCAATTCCAGT-ATTTGT---TATCAACTTTGATATTCCACATATCA 43257
Query 77328 TATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTT 77387
| || ||||| || | ||||| || | ||| | |||||| || | ||
Sbjct 43256 AACTGAAGAATACCTTGGCTAGCTGGACTACCTTCATAAGATTCATATTTCCCATAAATT 43197
Query 77388 TCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTA 77447
| ||||| ||| | | ||| ||||| | || || || ||||| ||||| | |||
Sbjct 43196 TTAGCTAATTCCATAGACATTTCTAATGCAGCATAGTACATAGTTTCAAAAATTCTTTTA 43137
Query 77448 TTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCT 77507
|| | |||| ||||||| || | ||||| |||||| ||||| | || |||
Sbjct 43136 TTTAATTCTTTTGCTTCATCTGATTCGTAAGGATATCTTAAAAGCATAAATGTGTCAGCT 43077
Query 77508 AATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGA 77567
||||| || || ||||| || || |||||||||||| | || || | | |||||| |
Sbjct 43076 AATCCTTGTACACCAATTCCTATTGGTCTATGTCTCCTGTTTGATCTCTCAGCTTCCTTA 43017
Query 77568 ATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACG 77627
| |||||||||||| | || |||||||| | | |||||| || | ||| |
Sbjct 43016 ACAGGATAATAATTTCTTTCAATAATTTTGTCTAAATTTCTCGTAATAATTTTTGTAATT 42957
Query 77628 TCCTTTAGTTTAAGAAAATCAAA---TCTTCCATCTATAACAA-ACATGTTCA--AAGCT 77681
|| | || ||| ||||| ||| | || ||| | | | | || | || ||||
Sbjct 42956 TCATATAATTTTTTAAAATTAAAAACTTTTTTTTCTGTGTCTACAAATTTACATAAAGCA 42897
Query 77682 ATAGATGCTAGATTACAAACTGCTACCTCAT-TAGCGTTGGCATATTGTATTATCTCGGT 77740
|||||||||| |||||||| || || |||| | | | || ||||| |||||| ||
Sbjct 42896 ATAGATGCTAAGTTACAAACAGCAACTTCATCTGGTGATGT-ATATTCTATTATTTCACA 42838
Query 77741 ACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGA 77800
||||||||||||||||| || || || | ||||| ||| || || ||| |||||
Sbjct 42837 GCATAGATTACTACATTTAATTGTACCTAAATTTTTTTGATTAGATTTAGCATTACATGA 42778
Query 77801 GTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCA 77860
|| || || | || | || || ||||||||||| || | ||||| |||
Sbjct 42777 ATCTTTGTACAACATGTATGGTACACCTGTTTCAATCTGACTTTGTAAAATAGCAAACCA 42718
Query 77861 GACGACTCTAGCTTTTATCATAGATTTGTATCGCC---TCTCTCTTTCATATTGAGTATA 77917
| || |||| || || ||| | || | ||| |||||| | |||
Sbjct 42717 TAAATCTTGAGCTAATAC---AGTTTTTTTTCCTAAATTTTCTTCTTCATACTTTTCATA 42661
Query 77918 TAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACAT 77977
|| ||||||||| || ||||| ||| ||| || || ||||||||||| |||||
Sbjct 42660 TAATTTTTCAAATTCTTCACCCCATGTTTCACTCAAACCTGGACATTCATTTGGACACAT 42601
Query 77978 CAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGC 78037
|| | ||| | || ||||||||||| ||||||||| | ||| || | ||| | |||
Sbjct 42600 TAAAGTCCAATTTTTATTTTCCTTAACTCTTTTCATAAATAAATCTGGAACCCAAACAGC 42541
Query 78038 AATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAA 78097
| ||||| ||||| | ||| |||||| || || ||| ||| | | ||| |||||
Sbjct 42540 ATAAAATAAATCTCTAGCTCTTAATTCTTCTTTACCATGATTTTTTCTCAAATCTAGAAA 42481
Query 78098 CTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATT 78157
|| | || || |||||||||||||| | ||||| ||| | ||| || |||
Sbjct 42480 TTCAAATATGTCTGAATGCCATGGTTCAATATATACTGCAAATGATCCTTTTCTTTTTCC 42421
Query 78158 ACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG-AATAATAC 78216
|| || ||||||| |||||| || || | ||| ||||||| |||||||| | |||| |
Sbjct 42420 TCCACCTTGATCTACATATCTAGCTGTATCGTTAAAAACTCTTAACATTGGTACTAAT-C 42362
Query 78217 CGTTAGATGTTCCATTTGTTC--CAGAAATATAACTTCCACTTGCGCGAATAT-TACTAA 78273
|||| || | ||||| |||| | | |||| | ||| | | || |||| | ||
Sbjct 42361 CGTTTGAAATACCATTAGTTCCTCTTATATATGAATTC--TGTCCACGTATATCTTGTAC 42304
Query 78274 TGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGT 78333
| | || || || || ||||| | ||| ||| | ||| || |||| ||||| ||
Sbjct 42303 T-GCTACACCAATACCACCTGCAGTTTTACTTATCAAAGCACATTGTTTTAATGTTTCAA 42245
Query 78334 AGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGAT 78393
| || || || ||| || | |||| || | |||||| |||||||| |
Sbjct 42244 AAATTCCTTCAATAGAATCTGCTTTCATACACAGCAAAAAACAAGATGACATTTGTGGTC 42185
Query 78394 GAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTA 78453
|| |||| |||||||||||| || | |||||| ||||| |||||| || | |
Sbjct 42184 TTGGTGTCCCTGAATTAAATAATGTTGGCGTTGCATGTGTAAAATATTTTTGTGACATCA 42125
Query 78454 GATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCA 78513
||| || ||||| | ||| ||||| || | ||| || || | | ||| | ||
Sbjct 42124 GATGATAGGTTTCTAATGCTTTTTCTAGATCATCTAAATGTATACCAATTGATACTCTCA 42065
Query 78514 TCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTT 78573
| | || |||||| |||||||| | | |||||||| || || || |||||| |||
Sbjct 42064 TAATCAAATGCTGTGGTCTTTCTATGATTTTATTATTAATACGTAATAAATATGATCTTT 42005
Query 78574 CCAAAGTTTTAAAACCAAAATAGTTGTA 78601
| || |||||||||||||| || | |||
Sbjct 42004 CTAACGTTTTAAAACCAAAGTAATCGTA 41977
>seq187
Length=410067
Score = 246 bits (272), Expect = 4e-60
Identities = 590/880 (67%), Gaps = 32/880 (4%)
Strand=Plus/Minus
Query 47831 TTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTT 47890
|| || |||||| || ||| ||||| ||| | |||||||| || ||||| || |||||
Sbjct 75452 TTCAGCCATAACACCAGATTTCTGATAATCAGCAACACGTTTTTCAAAAAAGTTTGTTTT 75393
Query 47891 GCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAttttttt 47950
|||| | || || ||||| ||| ||| ||||| |||| | ||||||||
Sbjct 75392 TCCTTGTAGAGAAATTAAATCCATCCAATTAAAAGGATTTTTTGCAAAAAAAATTTTTGA 75333
Query 47951 AAATCCTAA---TTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCAT 48007
| | ||||| |||| ||| | || |||||| || ||||| ||||| ||| |
Sbjct 75332 ACAACCTAAACATTCT--AATAA-TCGATCTGCTACAAATTCAATATACTGAGACATTAA 75276
Query 48008 TTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTC-CGTAAGAAACTCTTGTTCGA 48066
| ||||||| || || | | | ||||||| || | || |||| | | ||| |
Sbjct 75275 TCTTGAATTCATCCCAATTAAGTCACAAGGTAGAGATTCACATATGAAAGACCT-TTCAA 75217
Query 48067 TAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATAC---AACA 48123
||||| || || || | | || ||| || | || || || |
Sbjct 75216 CTTCAACAGCTTCTTTTACAATATTTTTAACAACTTCTTCTGGTAGTTTATTTTCTAATA 75157
Query 48124 AATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATT 48183
|| || | |||| ||| |||||| ||| | ||||||||||||||||||| ||
Sbjct 75156 AAC---TATATATTAGACAGTTAAAATCTGTATGTAATCCTTCATCTCTACTAATTAGTT 75100
Query 48184 CGTTAGAAAATGTGAGACCGGGCA-TTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
| || ||| || || || | | || || ||||||| | |||||| || || |
Sbjct 75099 CATTGCTAAAGGTAAGTCCATGTAATTTGTTTT-GTTTTTTAAACCAAAAAATAGCACAG 75041
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302
||| ||| ||| | ||| ||||| || ||| ||| || ||| ||| | ||
Sbjct 75040 AAACTACCACTAAACAGTATACCTTCAACACATGCATTTGCTACAATTCTTTCTGC--AA 74983
Query 48303 CTGGCTTCGTTG--TGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCA 48360
|| || || | |||||| | ||||||| || || ||||| || || |
Sbjct 74982 ATGAATTTGTATCATTTATCCATTTTGCTGCCCAAAGTGCTTTATTCTTAACTGCTGGTA 74923
Query 48361 TTGTTTCTATAGCATTAAAGAGA-----AAGtt-tttttCATTGCTATCTTTAACGTAAG 48414
| |||| ||||||| ||| | | | ||| |||||||| |||| | |||
Sbjct 74922 TATTTTCAATAGCATGAAATAAATTTAAACGTTCTTTTTCAT------CTTTTATATAAT 74869
Query 48415 TATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGT 48474
| ||||| | | |||||| |||| || || |||||||| | ||| || |||||| ||
Sbjct 74868 TGTCTATAAGTAAACTATATGTTTCTGAATGTATATTTTCCACTGCTATTTGAAATGAGT 74809
Query 48475 AAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCAT 48534
|||| | | |||||||| || || ||||| | ||||| |||||||| ||
Sbjct 74808 AAAATTTTTTAGCTTCTGTAATTTGAACCTCTCTTAAAAATTTACTGGCCAAATTTTCTA 74749
Query 48535 TTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGT 48594
|||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||| |
Sbjct 74748 ATACTATACCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGCTTTTCAT 74689
Query 48595 TGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCC 48654
| | | | ||| | | || || | ||| |||||| ||||| ||||||||||||||
Sbjct 74688 TCTCATTTAATTTTTCAAAATCTTTTAAATCACTTGATAAATCTATTTCTTCAGCTGTCC 74629
Query 48655 AAAATGATGCCTCTGCTTTTTTATACATATTCCATATATC 48694
|||||||||| |||||||||||||| | || ||| | |||
Sbjct 74628 AAAATGATGCTTCTGCTTTTTTATAAAAATCCCAAACATC 74589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694638547173760
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