Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq369 116 3e-21 seq368 107 2e-18 >seq369 Length=2804353 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 ||||||||||| || | |||||||| || || |||||||||||| || || || Sbjct 2577108 AAAATGCAAATTTTTGTAAAAACATTAACTGGAAAAACCATTACCCTTGATGTTGAGCCA 2577049 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || ||| | | || ||||| ||||||| ||||||||||| | || ||| Sbjct 2577048 TCTGATACGATTGAGAATGTTAAGGCAAAAATTCAAGATAAAGAAGGAATTCCTCCTGAT 2576989 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 ||||||||| | || ||||| || |||||| | |||||| | || | | ||||| Sbjct 2576988 CAACAAAGATTAATATTTGCTGGAAAACAATTAGAAGATGGAAGGACCTTATCAGATTAT 2576929 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGT 29170 |||||||| |||||||||||| | ||| |||| Sbjct 2576928 AATATTCAAAAGGAATCTACTTTACACTTGGT 2576897 >seq368 Length=2153551 Score = 107 bits (118), Expect = 2e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 29035 ATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 29094 || ||||| ||||||| ||||||||||| | || || ||||||||| | || | Sbjct 464444 ATGTTAAGGCAAAAATTCAAGATAAAGAAGGAATTCCACCTGACCAACAAAGATTAATAT 464503 Query 29095 TTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAAT 29154 |||| || |||||| | |||||| | |||| | | |||||||||||||| ||||||| Sbjct 464504 TTGCTGGAAAACAATTAGAAGATGGAAGAACTTTATCAGATTACAATATTCAAAAGGAAT 464563 Query 29155 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||| | ||| | |||||| ||||| |||| || Sbjct 464564 CTACATTACACTTAGTGTTAAGATTAAGAGGTGG 464597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428334058031660