Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq369 156 6e-33 seq368 147 3e-30 >seq369 Length=2804353 Score = 156 bits (172), Expect = 6e-33 Identities = 190/262 (73%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 146068 TACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCAT 146126 |||||| ||||||||||||| |||| || |||||||||||||| | || || | ||| | Sbjct 2576896 TACCAAGTGTAAAGTAGATTCCTTTTGA-ATATTATAATCTGATAAGGTCCTTCCATCTT 2576954 Query 146127 CTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTT 146186 ||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||| Sbjct 2576955 CTAATTGTTTTCCAGCAAATATTAATCTTTGTTGATCAGGAGGAATTCCTTCTTTATCTT 2577014 Query 146187 GNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTTT 146246 | ||||| || || || || || || || |||| Sbjct 2577015 GAATTTTTGCCTTAACATTCTCAATCGTATCAGATGGCTCAACATCAAGGGTAATGGTTT 2577074 Query 146247 TACCTGTTAATGTTTTAATGAATATTTGCATTTTATTAGAAA-AAT-ATTTGTTaaaaaa 146304 | || ||||||||||| | || ||||||||||| ||| ||| ||| | | |||||| Sbjct 2577075 TTCCAGTTAATGTTTTTACAAAAATTTGCATTTTCTTAAAAATAATGAAAAGAAAAAAAA 2577134 Query 146305 aaTAATTACTATTCTTTATTTT 146326 || |||| ||||| | |||| Sbjct 2577135 AAAAATTTAGATTCTATCTTTT 2577156 >seq368 Length=2153551 Score = 147 bits (162), Expect = 3e-30 Identities = 117/138 (85%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | |||||| || || ||||| |||||||| ||| || ||||| |||||||| Sbjct 464597 CCACCTCTTAATCTTAACACTAAGTGTAATGTAGATTCCTTTTGA-ATATTGTAATCTGA 464539 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | |||||| | ||| |||||||||||||||||||| || |||||||| || || || || Sbjct 464538 TAAAGTTCTTCCATCTTCTAATTGTTTTCCAGCAAATATTAATCTTTGTTGGTCAGGTGG 464479 Query 146170 AATTCCTTCTTTATCTTG 146187 |||||||||||||||||| Sbjct 464478 AATTCCTTCTTTATCTTG 464461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743522942602240