Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29]
372 sequences; 24,055,504 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq360 224 8e-54
>seq360
Length=1059361
Score = 224 bits (248), Expect = 8e-54
Identities = 502/743 (68%), Gaps = 13/743 (2%)
Strand=Plus/Plus
Query 20043 ATTTCCC-TTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTAT 20101
||||||| ||||||||||| || |||||| | ||| || ||||||| || | |
Sbjct 670456 ATTTCCCATTATTAACTACAAAGAAATTATTTTTAAGAGGAATTATTGAAGAATTGCTTT 670515
Query 20102 GGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAG-ATTTGG 20160
||||||||| |||| ||||||| || | |||| || ||| | |||| || |||
Sbjct 670516 GGTTTATTAGAGGAGAAACAAATGGTAATACG-TTGTTAAATAAGAATGTAAGGATATGG 670574
Query 20161 AGCGCACATGGATCTAAGCAATTTTTACACA---GCAATGGATTTGACAACCGTCAAGAG 20217
|| |||| ||| | |||||||| | | | || |||| | | | |||
Sbjct 670575 GAAGCTAATGGTACTAGGGAATTTTTAGATAATAGAAAATTATTTCATA---GAGAAGTT 670631
Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277
||||| || ||| | ||||| ||||||||||||||||| || ||||||||| |
Sbjct 670632 AACGATTTAGGACCTATTTATGGTTTTCAATGGAGACATTTCGGTGCTGAATATACAAAT 670691
Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337
||| | |||||| ||||||| ||||||||| ||||| | || |||||||||
Sbjct 670692 ATGTATGATAATTATGAAAATAAAGGAGTGGATCAATTAAAAAATATAATAAATTTAATT 670751
Query 20338 -AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396
|||| || || | | | ||||||||| |||| || || ||||| | |||||| |
Sbjct 670752 AAAAATGATCCTACAAG-TAGAAGAATTCTTTTGTGTGCATGGAATGTAAAAGATCTTGA 670810
Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATT 20456
|||||| || ||||| |||||||| |||| || ||||| ||| || ||||
Sbjct 670811 CCAAATGGCATTACCTCCTTGTCATATTTTATGTCAGTTTTATGTTTTCGATGGGAAATT 670870
Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516
|| ||| ||||||||| |||| |||| | || || || || ||||| ||||||||
Sbjct 670871 ATCATGTATTATGTATCAAAGATCATGTGATTTAGGGCTAGGAGTACCTTTTAATATTGC 670930
Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTT 20576
|||| | | |||| ||||||||||||| || |||| || | | | ||
Sbjct 670931 TTCTTATTCTATTTTTACTCATATGATTGCACAAGTCTGTAATTTGCAACCTGCGCAGTT 670990
Query 20577 AGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGA-ACCTTTAAAATTAC 20635
| ||| ||||| | || ||| |||| |||||| || || | || ||||||
Sbjct 670991 CATACACGTTTTAGGAAATGCACATGTTTATAATAATCACATTGATAGTTTAAAAATTCA 671050
Query 20636 AGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATA 20695
| |||||| || ||| | | ||||||||| ||| | | || | | ||||| |||
Sbjct 671051 ACTTAACA-GAATACCCTATCCATTCCCAACACTTAAATTAAATCCAGATATTAAAAATA 671109
Query 20696 TTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTC 20755
|| | ||||||| | | |||||| || || |||| || ||| | ||||
Sbjct 671110 TTGAAGATTTTACAATTTCGGATTTTACAATACAAAATTATGTTCATCATGAAAAAATTT 671169
Query 20756 CAATGGAAATGTCTGTTTAATAT 20778
||||||| ||| ||| |||||||
Sbjct 671170 CAATGGATATGGCTGCTTAATAT 671192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399182190199540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |