Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq368 122 6e-23 seq369 116 3e-21 >seq368 Length=2153551 Score = 122 bits (134), Expect = 6e-23 Identities = 127/167 (76%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| |||||||| ||||| || | || || || ||||| || |||||||| | Sbjct 464597 CCACCTCTTAATCTTAACACTAAGTGTAATGTAGATTCCTTTTGAATATTGTAATCTGAT 464538 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | |||||||||||||| ||||| |||| || | ||||||||| |||| Sbjct 464537 AAAGTTCTTCCATCTTCTAATTGTTTTCCAGCAAATATTAATCTTTGTTGGTCAGGTGGA 464478 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATC 15303 ||||||||||| || |||||| ||| ||| | || ||||| || Sbjct 464477 ATTCCTTCTTTATCTTGAATTTTTGCCTTAACATTCTCAATGGTGTC 464431 >seq369 Length=2804353 Score = 116 bits (128), Expect = 3e-21 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 15167 GTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15226 || || || ||||| || || ||||| || | || | |||||||||||||| ||| Sbjct 2576909 GTAGATTCCTTTTGAATATTATAATCTGATAAGGTCCTTCCATCTTCTAATTGTTTTCCA 2576968 Query 15227 GCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTT 15286 || |||| || | |||||| || |||||||||||||| || |||||| ||| Sbjct 2576969 GCAAATATTAATCTTTGTTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTGCCTTA 2577028 Query 15287 ACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTT 15346 ||| | || || ||||| || ||||| | |||||||||||| || || | ||| Sbjct 2577029 ACATTCTCAATCGTATCAGATGGCTCAACATCAAGGGTAATGGTTTTTCCAGTTAATGTT 2577088 Query 15347 TTTACAAAAATTTGCATAT--TTGAAAATAA 15375 ||||||||||||||||| | || ||||||| Sbjct 2577089 TTTACAAAAATTTGCATTTTCTTAAAAATAA 2577119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362177557970052