Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq369 120 2e-22 seq368 102 6e-17 >seq369 Length=2804353 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 ||||| |||| || || ||||||||||||||||| ||| | |||| || Sbjct 2576897 ACCAAGTGTAAAGTAGATTCCTTTTGAATATTATAATCTGATAAGGTCCTTCCATCTTCT 2576956 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 ||||||||||| |||||||| || | ||| || || |||| | |||||||||||| | Sbjct 2576957 AATTGTTTTCCAGCAAATATTAATCTTTGTTGATCAGGAGGAATTCCTTCTTTATCTTGA 2577016 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 |||||| || || | ||| ||||| | ||||| ||||| | ||||| ||||| Sbjct 2577017 ATTTTTGCCTTAACATTCTCAATCGTATCAGATGGCTCAACATCAAGGGTAATGGTTTTT 2577076 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || ||||| || || ||||| |||||||| Sbjct 2577077 CCAGTTAATGTTTTTACAAAAATTTGCAT 2577105 >seq368 Length=2153551 Score = 102 bits (112), Expect = 6e-17 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 43874 AAATACATATCCAATCATCAACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCT 43933 ||||| ||| ||| | |||| ||||| ||||||||||| || |||| || || Sbjct 464618 AAATAAATAAATAATTAAAAACCACCTCTTAATCTTAACACTAAGTGTAATGTAGATTCC 464559 Query 43934 TTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATC 43993 ||||||||||| ||||| ||| | |||| || ||||||||||| |||||||| Sbjct 464558 TTTTGAATATTGTAATCTGATAAAGTTCTTCCATCTTCTAATTGTTTTCCAGCAAATATT 464499 Query 43994 AACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCA 44053 || | ||| ||||| | || | |||||||||||| ||||||| || || | || Sbjct 464498 AATCTTTGTTGGTCAGGTGGAATTCCTTCTTTATCTTGAATTTTTGCCTTAACATTCTCA 464439 Query 44054 ACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACC 44094 | || || | ||||| || || | || || ||||| || Sbjct 464438 ATGGTGTCAGATGGCTCGACGTCAAGGGTTATAGTTTTTCC 464398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354775991527056