Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq369 141 8e-29 seq368 122 8e-23 >seq369 Length=2804353 Score = 141 bits (156), Expect = 8e-29 Identities = 159/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGT--TGGAATCCT 94856 |||||||| ||||||||||||||||| | |||||||| | ||| || | ||| | Sbjct 2576897 ACCAAGTGTAAAGTAGATTCCTTTTGAATATTATAATC--TGATAAGGTCCTTCCATCTT 2576954 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | | |||||||| |||| ||||||||||| ||||| |||||||| |||||||| || | Sbjct 2576955 CTAATTGTTTTCCAGCAAATATTAATCTTTGTTGATCAGGAGGAATTCCTTCTTTATCTT 2577014 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 |||||||||||| || | | || |||| | || || |||| || ||||||| Sbjct 2577015 GAATTTTTGCCTTAACATTCTCAATCGTATCAGATGGCTCAACATCAAGGGTAATGGTTT 2577074 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||| | ||||| ||||| || ||||| Sbjct 2577075 TTCCAGTTAATGTTTTTACAAAAATTTGCAT 2577105 >seq368 Length=2153551 Score = 122 bits (134), Expect = 8e-23 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| |||| ||||| ||||| || |||||||||||||| | || ||||| Sbjct 464597 CCACCTCTTAATCTTAACACTAAGTGTAATGTAGATTCCTTTTGAATATTGTAATCTGAT 464538 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| || | |||||||| |||| ||||||||||| || || || ||| Sbjct 464537 AAAGTTCTTCCATCTTCTAATTGTTTTCCAGCAAATATTAATCTTTGTTGGTCAGGTGGA 464478 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || |||||||| || | |||||||||||| || | | ||||||| | |||||| Sbjct 464477 ATTCCTTCTTTATCTTGAATTTTTGCCTTAACATTCTCAATGGTGTCAGATGGCTCGACG 464418 Query 94961 TCAATCGTGATGGTTTTTCC 94980 |||| || || |||||||| Sbjct 464417 TCAAGGGTTATAGTTTTTCC 464398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289115445920