Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq367 104 4e-18 >seq367 Length=1919181 Score = 104 bits (114), Expect = 4e-18 Identities = 168/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| || || || ||||| ||| | ||| | || | | ||||| | Sbjct 144840 GAGATAACATTCAAGGTATTACAAAACCAGCCATCAGACGTTTAGCAAGAAGAGGTGGTG 144781 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | || ||| | ||||| || | |||||||| || | | ||||| || | ||| | Sbjct 144780 TTAAACGTATTTCTGGTTTAATATATGAAGAAATCAGAGGAGTTTTAAAAGTTTTCTTAG 144721 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | ||| || | ||| | || ||||| || ||||||||| | || || ||||| Sbjct 144720 AAAACGTAATTAAAGATTCCATCATGTATACTGAACACGCTAAAAGAAAAACCGTCACTG 144661 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||||| || || | || ||| | ||||| | | | |||||||||||| ||| Sbjct 144660 CTATGGATATTGTATACTCCTTAAAAAGACAAGGAAGAACTTTATATGGTTTTGGAGGTT 144601 Query 16698 AA 16699 || Sbjct 144600 AA 144599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074859877796