Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29]
372 sequences; 24,055,504 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq364 138 2e-27
>seq364
Length=1300438
Score = 138 bits (152), Expect = 2e-27
Identities = 424/648 (65%), Gaps = 16/648 (2%)
Strand=Plus/Plus
Query 193554 ATTGATCATATCTATGAGAAGATCACTCTTCATTATGGAGATCTAACTGATCCT-GTAAA 193612
|||||||| || | || ||| | | | | |||||||||||| || |||| | ||||
Sbjct 606325 ATTGATCACATATTCGATAAGTTAATTTTACATTATGGAGATTTACTTGATAGTAGTAA- 606383
Query 193613 TGTTATGGGTGTCATTA----GGGCAGTTGAACCTGCTGAGATCTATAATCTTGGTGCTC 193668
||| || |||||| | | | | ||| ||| || ||||| | | ||| |
Sbjct 606384 ---TATATGT-TCATTAATATGTGAAATAAGACCGAATGAAATATATAACTTAGCTGCGC 606439
Query 193669 AAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTATACTTCTAATGTTGATGCTTTAG 193728
|||||||||| ||||| ||||| ||||| |||||||| | | | ||||||||
Sbjct 606440 AAAGTCATGTAAAAGTAAGTTTTGAAATGCCTGAGTATACAACAGAAGCAACTGCTTTAG 606499
Query 193729 GAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATCT 193788
| || | |||||| | |||| | | | || | || | ||| || || | |
Sbjct 606500 GTACATTAAGAATATTAGAAGGAATAAGAATATC---AAAAGTTAAAAATATTAAATTTT 606556
Query 193789 ATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCA 193848
|| | ||||| || ||| | | ||| |||| | | || | | |||| |
Sbjct 606557 ATAATGCATCAACATCTGAATTATTTGGAAAAGTTCAATGTTCTATTCAAAATGAAAATA 606616
Query 193849 CACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCA 193908
| |||||| ||||| || ||||||| ||||||| || |||| ||| || | |
Sbjct 606617 CCCCATTTTATCCAGTATCCCCTTATGCCATAGCAAAATTATATGCACATTATATTACAA 606676
Query 193909 AGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAAT 193968
|||||| | || |||||| | || | ||||||| | || ||||| |||
Sbjct 606677 TAAATTATAGAGAATCATATAATATGTTTTGTATTAATGGTATTTTATTTAATCATGAAA 606736
Query 193969 CTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATCT 194028
|||||||||||| || || ||||| || | || ||||| |||| | | || ||
Sbjct 606737 GTCCAAGAAGAGGAGAAACGTTTGTTACAAGAAAAATTACTAGAGGTATTGCAAAAATTC 606796
Query 194029 CTGTTGGATTACAGAAGATTCTTTATCTT-GGTAATCTTAATGCTAAGAGGGATTGGGGA 194087
|||| | || || | ||||||| |||||| | || | | || ||||||||
Sbjct 606797 AAAAAAAATTAGA-AACATCCATTATCTTAGGTAATATAGATACATATAGAGATTGGGGC 606855
Query 194088 CACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGAT 194147
|| || ||||||||||| | || |||| | ||||||||||| |||| | ||||||
Sbjct 606856 CATGCTAAGGATTATGTATATGCTATGTATCTTATGTTGCAACAAAATGAGGCAGATGAT 606915
Query 194148 TATGTGATTGCTACAGGTGAACAGTATTCTGTTAGAG-ACTTTGTGAA 194194
| ||| ||| | | |||||| ||||||| |||| | ||||||||
Sbjct 606916 TTTGTTATTTGTTCGAATGAACAACATTCTGTCAGAGAATTTTGTGAA 606963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807551444868320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |