Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq369 129 5e-25 seq368 89.7 4e-13 >seq369 Length=2804353 Score = 129 bits (142), Expect = 5e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 ||||||||||||||||| ||||| | || ||||||||||||||| | || ||| || Sbjct 2577108 AAAATGCAAATTTTTGTAAAAACATTAACTGGAAAAACCATTACCCTTGATGTTGAG-CC 2577050 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | | || || ||| | || || ||||||| ||||||||||| | || ||| Sbjct 2577049 ATCTGATACGATTGAGAATGTTAAGGCAAAAATTCAAGATAAAGAAGGAATTCCTCCTGA 2576990 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||| |||||| | || | ||| || |||||||||||||||| | ||| | | ||||| Sbjct 2576989 TCAACAAAGATTAATATTTGCTGGAAAACAATTAGAAGATGGAAGGACCTTATCAGATTA 2576930 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGT 115494 ||| |||||||| || |||||| |||| |||| Sbjct 2576929 TAATATTCAAAAGGAATCTACTTTACACTTGGT 2576897 >seq368 Length=2153551 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 115313 GGAAAAACCATTACCGTCGAAACGGAGTCCAGC-GACACTGTTGGACAAGTAAAACAAAA 115371 |||||||| || ||| | || ||| ||| | ||||| ||| | || || ||| Sbjct 464398 GGAAAAACTATAACCCTTGACGTCGAG-CCATCTGACACCATTGAGAATGTTAAGGCAAA 464456 Query 115372 AATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACA 115431 |||| ||||||||||| | || ||| || |||||| | || | ||| || ||||| Sbjct 464457 AATTCAAGATAAAGAAGGAATTCCACCTGACCAACAAAGATTAATATTTGCTGGAAAACA 464516 Query 115432 ATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATAT 115491 ||||||||||| | ||| | | ||||| || |||||||| || ||||| |||| | Sbjct 464517 ATTAGAAGATGGAAGAACTTTATCAGATTACAATATTCAAAAGGAATCTACATTACACTT 464576 Query 115492 GGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| |||| || Sbjct 464577 AGTGTTAAGATTAAGAGGTGG 464597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425342071596640