Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq368 131 1e-25 seq369 122 8e-23 >seq368 Length=2153551 Score = 131 bits (144), Expect = 1e-25 Identities = 151/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 25026 GGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG-CAAAA 25084 || ||| | || || | || || ||| | |||||||| || ||| | ||| ||||| Sbjct 464398 GGAAAAACTATAACCCTTGACGTCGAGCCATCTGACACCATTGAGAATGTTAAGGCAAAA 464457 Query 25085 AATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACA 25144 | ||| || |||||||| ||||||||||||||||| | | || ||||| || ||||| Sbjct 464458 ATTCAA-GATAAAGAAGGAATTCCACCTGACCAACAAAGATTAATATTTGCTGGAAAACA 464516 Query 25145 ATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTT 25204 ||||||||||| | ||| | ||||||||||||||||| ||||| || |||| || Sbjct 464517 ATTAGAAGATGGAAGAACTTTATCAGATTACAATATTCAAAAGGAATCTACATTACACTT 464576 Query 25205 AGTGCTAAGGCTAAGAGGAGG 25225 |||| |||| ||||||| || Sbjct 464577 AGTGTTAAGATTAAGAGGTGG 464597 >seq369 Length=2804353 Score = 122 bits (134), Expect = 8e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| |||||||| || || || || ||| |||| || | || || ||| | || Sbjct 2577106 AATGCAAATTTTTGTAAAAACATTAACTGGAAAAACCATTACCCTTGATGTTGAGCCATC 2577047 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || || ||| | ||| |||||| ||| || |||||||| ||||| ||||| | Sbjct 2577046 TGATACGATTGAGAATGTTAAGGCAAAAATTCAA-GATAAAGAAGGAATTCCTCCTGATC 2576988 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || ||||| || |||||||||||||||| | || | ||||| | Sbjct 2576987 AACAAAGATTAATATTTGCTGGAAAACAATTAGAAGATGGAAGGACCTTATCAGATTATA 2576928 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||||||| ||||| || |||| || || Sbjct 2576927 ATATTCAAAAGGAATCTACTTTACACTTGGT 2576897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326035399180