Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29]
372 sequences; 24,055,504 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq368 131 1e-25
seq369 122 8e-23
>seq368
Length=2153551
Score = 131 bits (144), Expect = 1e-25
Identities = 151/201 (75%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 25026 GGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG-CAAAA 25084
|| ||| | || || | || || ||| | |||||||| || ||| | ||| |||||
Sbjct 464398 GGAAAAACTATAACCCTTGACGTCGAGCCATCTGACACCATTGAGAATGTTAAGGCAAAA 464457
Query 25085 AATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACA 25144
| ||| || |||||||| ||||||||||||||||| | | || ||||| || |||||
Sbjct 464458 ATTCAA-GATAAAGAAGGAATTCCACCTGACCAACAAAGATTAATATTTGCTGGAAAACA 464516
Query 25145 ATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTT 25204
||||||||||| | ||| | ||||||||||||||||| ||||| || |||| ||
Sbjct 464517 ATTAGAAGATGGAAGAACTTTATCAGATTACAATATTCAAAAGGAATCTACATTACACTT 464576
Query 25205 AGTGCTAAGGCTAAGAGGAGG 25225
|||| |||| ||||||| ||
Sbjct 464577 AGTGTTAAGATTAAGAGGTGG 464597
>seq369
Length=2804353
Score = 122 bits (134), Expect = 8e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| |||||||| || || || || ||| |||| || | || || ||| | ||
Sbjct 2577106 AATGCAAATTTTTGTAAAAACATTAACTGGAAAAACCATTACCCTTGATGTTGAGCCATC 2577047
Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| || || ||| | ||| |||||| ||| || |||||||| ||||| ||||| |
Sbjct 2577046 TGATACGATTGAGAATGTTAAGGCAAAAATTCAA-GATAAAGAAGGAATTCCTCCTGATC 2576988
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || ||||| || |||||||||||||||| | || | ||||| |
Sbjct 2576987 AACAAAGATTAATATTTGCTGGAAAACAATTAGAAGATGGAAGGACCTTATCAGATTATA 2576928
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207
|||||||||| ||||| || |||| || ||
Sbjct 2576927 ATATTCAAAAGGAATCTACTTTACACTTGGT 2576897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433326035399180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |