Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq369 104 2e-17 >seq369 Length=2804353 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 ||||||||||||||||| ||||| | || || |||||||||||| | || || || Sbjct 2577108 AAAATGCAAATTTTTGTAAAAACATTAACTGGAAAAACCATTACCCTTGATGTTGAGCCA 2577049 Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303 ||| | ||| | || || ||||||| || |||||||| |||| ||| Sbjct 2577048 TCTGATACGATTGAGAATGTTAAGGCAAAAATTCAAGATAAAGAAGGAATTCCTCCTGAT 2576989 Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363 |||||||| | || | ||| || |||||||| |||||| | || | | |||||| Sbjct 2576988 CAACAAAGATTAATATTTGCTGGAAAACAATTAGAAGATGGAAGGACCTTATCAGATTAT 2576929 Query 111364 AATATACAAAAAGAATCTACACTACATTTAGT 111395 ||||| ||||| |||||||| |||| || || Sbjct 2576928 AATATTCAAAAGGAATCTACTTTACACTTGGT 2576897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423038082042400