Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq369 150 3e-31 seq368 140 6e-28 >seq369 Length=2804353 Score = 150 bits (166), Expect = 3e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 ||||||||||| || || || ||||| || |||||||| || | ||||| |||||||| Sbjct 2576896 TACCAAGTGTAAAGTAGATTCCTTTTGAATATTATAATCTGATAAGGTCCTTCCATCTTC 2576955 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 ||| || || || || ||||| | ||||||||| || || ||||| ||||| || ||||| Sbjct 2576956 TAATTGTTTTCCAGCAAATATTAATCTTTGTTGATCAGGAGGAATTCCTTCTTTATCTTG 2577015 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 ||| |||||||| || ||| || || || | || || || || | ||| |||||||| Sbjct 2577016 AATTTTTGCCTTAACATTCTCAATCGTATCAGATGGCTCAACATCAAGGGTAATGGTTTT 2577075 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| || | || || || || || |||||| Sbjct 2577076 TCCAGTTAATGTTTTTACAAAAATTTGCATT 2577106 >seq368 Length=2153551 Score = 140 bits (154), Expect = 6e-28 Identities = 142/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||||| || || || ||||| || || ||||| || | || || |||||| Sbjct 464582 AACACTAAGTGTAATGTAGATTCCTTTTGAATATTGTAATCTGATAAAGTTCTTCCATCT 464523 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| || || || || ||||| | |||||||||||| |||||||| ||||| || ||| Sbjct 464522 TCTAATTGTTTTCCAGCAAATATTAATCTTTGTTGGTCAGGTGGAATTCCTTCTTTATCT 464463 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 ||||| |||||||| || ||| |||||||| | || || || || | ||| || ||| Sbjct 464462 TGAATTTTTGCCTTAACATTCTCAATGGTGTCAGATGGCTCGACGTCAAGGGTTATAGTT 464403 Query 68430 TTTCC 68434 ||||| Sbjct 464402 TTTCC 464398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921618114455840