Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq369 123 2e-23 seq368 105 5e-18 >seq369 Length=2804353 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 ||||||||||| ||| | ||||||||||| || |||||||||||| | || || | Sbjct 2577108 AAAATGCAAATTTTTGTAAAAACATTAACTGGAAAAACCATTACCCTTGATGTTGAGCCA 2577049 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 | || ||| | | || ||||| ||||||| |||||||| || | ||| | Sbjct 2577048 TCTGATACGATTGAGAATGTTAAGGCAAAAATTCAAGATAAAGAAGGAATTCCTCCTGAT 2576989 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| ||| | || |||||||| |||||| |||||||| || || | | ||||| Sbjct 2576988 CAACAAAGATTAATATTTGCTGGAAAACAATTAGAAGATGGAAGGACCTTATCAGATTAT 2576929 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTA 22043 |||||||| |||||||||||| | || ||||| Sbjct 2576928 AATATTCAAAAGGAATCTACTTTACACTTGGTA 2576896 >seq368 Length=2153551 Score = 105 bits (116), Expect = 5e-18 Identities = 125/168 (74%), Gaps = 6/168 (4%) Strand=Plus/Plus Query 21907 ATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAACCAACAGAGACTTA 21963 || ||||| ||||||| |||||||| || | ||||| ||||||| ||| | | Sbjct 464444 ATGTTAAGGCAAAAATTCAAGATAAAGAAGGAATTCCACCTG---ACCAACAAAGATTAA 464500 Query 21964 TCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGG 22023 | |||||||| |||||| |||||||| || |||| | | |||||||||||||| |||| Sbjct 464501 TATTTGCTGGAAAACAATTAGAAGATGGAAGAACTTTATCAGATTACAATATTCAAAAGG 464560 Query 22024 AATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAATAAT 22071 ||||||| | || | || ||| | ||| |||| || | ||||| || Sbjct 464561 AATCTACATTACACTTAGTGTTAAGATTAAGAGGTGGTTTTTAATTAT 464608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358123176351688