Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq369 86.0 5e-12 >seq369 Length=2804353 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATA--GTACGAGAATCTT 114231 || || |||| |||||||| |||||||| || ||||| | ||| || | ||||| Sbjct 2576897 ACCAAGTGTAAAGTAGATTCCTTTTGAATATTATAATC--TGATAAGGTCCTTCCATCTT 2576954 Query 114232 CAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGG 114291 | | |||||| ||||| | || | | ||||| || |||||||| |||||||| || Sbjct 2576955 CTAATTGTTTTCCAGCAAATATTAATCTTTGTTGATCAGGAGGAATTCCTTCTTTATCTT 2577014 Query 114292 CAATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTT 114350 ||| ||||| ||| | | |||| || || | | || || || | ||| | ||| Sbjct 2577015 GAAT-TTTTGCCTTAACATTCTCAATCGTATCAGATGGCTCAACATCAAGGGTAATGGTT 2577073 Query 114351 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || | |||||||||||||| ||||| Sbjct 2577074 TTTCCAGTTAATGTTTTTACAAAAATTTGCAT 2577105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420132495215664