Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29]
372 sequences; 24,055,504 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq370 138 1e-27
>seq370
Length=3208305
Score = 138 bits (152), Expect = 1e-27
Identities = 537/827 (65%), Gaps = 19/827 (2%)
Strand=Plus/Plus
Query 110328 GGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTG 110387
||| ||||| | |||||| ||| ||||| || ||||| |||||| || |||||
Sbjct 1475284 GGTATATTCGATAATTTCACAACATAAGTTACTACATTTAATAGTACCCAAATTTTTCTG 1475343
Query 110388 ATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTG 110447
||| ||||| | || || | ||| ||||| ||||| ||||| || ||||| | ||
Sbjct 1475344 ATTGGATTTTGCATTACAAGAATCTTTATATAGCATATATGGTACTCCTGTTTCTATTTG 1475403
Query 110448 TGACTTGAGA-ATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTT 110506
| ||| | || || ||||| ||| || | || ||| || | | | ||
Sbjct 1475404 -GCTTTGTAATATAGCAAACCATAAATCTTGAGCAAGAACTGTTTTTTTTCCCATATTTT 1475462
Query 110507 CCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCT 110566
| || || || || || || || | |||||||| | || | ||| | ||| |
Sbjct 1475463 CTTCTTCATATTTAGTATATAATTTTTCAAATTCTTCACCCCAAGTTTCACTTAAACC-T 1475521
Query 110567 TCGCCTTG-TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAAC 110625
| || | ||||| | | | ||||||| | || | ||| |||||||| ||
Sbjct 1475522 GGACATTCATTTGGACACATTAATGTCCAATTTTTATTTTCTTTAACTCTCTTCATAAAA 1475581
Query 110626 AGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGG 110685
|| ||||||| ||| | || | || | || || | ||||| | || |||
Sbjct 1475582 AGATCAGGAACCCATACAGCATAAAATAAATCTCGTGCTCTTAATTCTTCTTTTCCATGG 1475641
Query 110686 TTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCG 110745
|| | || || ||||| || | ||||| || ||||||||||| | ||| |||||
Sbjct 1475642 TTCTTTCTTAAATCTAAAAATTCAAATATATCTGAATGCCATGGTTCAATATAAACAGCA 1475701
Query 110746 ATGGATCCCTTACGACGACC--CGCCTGGTTA-ACATAGCGTGCTGTGGCATTGAAGACC 110802
| ||||||||||| || | ||| | | ||||| | ||| || |||| || ||
Sbjct 1475702 AACGATCCCTTACGTTTTCCTCCACCTTGATCTACATATCTTGCAGTATCATTAAAAACT 1475761
Query 110803 CTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTG 110862
|| | |||||| | | |||| ||| ||||| ||||| ||||| || || |
Sbjct 1475762 CTTAACATAGGTACTAAACCATTAGATATTCCATTGGTACCTCTAATATAAGAATTTTGT 1475821
Query 110863 GCACGAATGTCGTGGATATGC-ATACCAATACCACCCGCCCACTTACTAATTTGTGCACA 110921
| | || || || | ||| | ||||||||| || || ||||||||| |||||
Sbjct 1475822 CCTCTTATATCTTGTAC-TGCTACACCAATACCTCCTGCAGTTTTACTAATTAAAGCACA 1475880
Query 110922 CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTG-TTGGCAATTAGAAAGC 110980
| | | || || || ||||||| ||||| |||||||| || ||| || ||||| |
Sbjct 1475881 TTGTTTTAGCGTTTCAAAAATACCTTCAATAGAATCTGCTTTCATTGATAACAAGAAA-C 1475939
Query 110981 AAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGA 111040
|||||||||| || || | || ||||| | ||| || | |||||| || ||||| | |
Sbjct 1475940 AAGAAGACATTTGTGGTCTTGGGGTTCCTGAATTAAACAATGTAGGAGTTGCATGGGT-A 1475998
Query 111041 ACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTA---CATCTTTACCG 111096
| | | | || ||||| | ||||| || || || || ||||| ||
Sbjct 1475999 AAATATTTCTGAGACATTAAATGATATGTTTCTAGAGCTTTATCTATGTCATCTATA--- 1476055
Query 111097 TGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGAT 111143
|| |||||||| | ||||| ||| || | || |||||| |||| ||
Sbjct 1476056 TGTATACCAATAGAAACTCTCATTAATAAATGTTGAGGTCTTTCAAT 1476102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588973261261600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |