Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq368 145 6e-30 seq369 143 2e-29 >seq368 Length=2153551 Score = 145 bits (160), Expect = 6e-30 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | ||| ||||| || | |||||||| ||||| ||||||||||| | Sbjct 464597 CCACCTCTTAATCTTAACACTAAGTGTAATGTAGATTCCTTTTGAATATTGTAATCTGAT 464538 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| || ||||| || || |||||||| || | ||||| || || ||| Sbjct 464537 AAAGTTCTTCCATCTTCTAATTGTTTTCCAGCAAATATTAATCTTTGTTGGTCAGGTGGA 464478 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||||||||||||||||||| || ||| | || | |||||||| | || || Sbjct 464477 ATTCCTTCTTTATCTTGAATTTTTGCCTTAACATTCTCAATGGTGTCAGATGGCTCGACG 464418 Query 101423 TCAAGAGTGACCGTTTTGCC 101442 ||||| || | ||||| || Sbjct 464417 TCAAGGGTTATAGTTTTTCC 464398 >seq369 Length=2804353 Score = 143 bits (158), Expect = 2e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 |||||||| ||||| ||||| ||||| | | || || |||| || ||||| || || Sbjct 2576909 GTAGATTCCTTTTGAATATTATAATCTGATAAGGTCCTTCCATCTTCTAATTGTTTTCCA 2576968 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 |||||||| || | |||||||| || ||||| ||||||||||||||||||||| || Sbjct 2576969 GCAAATATTAATCTTTGTTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTGCCTTA 2577028 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 ||| | || | || ||||| | || || ||||| || | ||||| || ||||| ||| Sbjct 2577029 ACATTCTCAATCGTATCAGATGGCTCAACATCAAGGGTAATGGTTTTTCCAGTTAATGTT 2577088 Query 101453 TTTACAAATATCTGCAT 101469 |||||||| || ||||| Sbjct 2577089 TTTACAAAAATTTGCAT 2577105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396276603372804