Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq369 165 1e-35 seq368 145 1e-29 >seq369 Length=2804353 Score = 165 bits (182), Expect = 1e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || ||||||||||||| |||||||| ||||| ||||||| || | | Sbjct 2577104 TGCAAATTTTTGTAAAAACATTAACTGGAAAAACCATTACCCTTGATGTTGAGCCATCTG 2577045 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || ||||| ||| ||||||||| ||||| || ||||||| Sbjct 2577044 ATACGATTGAGAATGTTAAGGCAAAAATTCAAGATAAAGAAGGAATTCCTCCTGATCAAC 2576985 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| || ||||||||||| ||| || || ||| |||||||||||| Sbjct 2576984 AAAGATTAATATTTGCTGGAAAACAATTAGAAGATGGAAGGACCTTATCAGATTATAATA 2576925 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | ||||| ||||| ||| | || || ||| Sbjct 2576924 TTCAAAAGGAATCTACTTTACACTTGGTA 2576896 >seq368 Length=2153551 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 146057 AGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAATAA 146116 ||||||||| || || |||| || || | || || ||| | ||||| || || Sbjct 464397 AGGAAAAACTATAACCCTTGACGTCGAGCCATCTGACACCATTGAGAATGTTAAGGCAAA 464456 Query 146117 AATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACA 146176 ||| ||| ||||||||| |||||||| || ||||||||| | || ||||| || ||||| Sbjct 464457 AATTCAAGATAAAGAAGGAATTCCACCTGACCAACAAAGATTAATATTTGCTGGAAAACA 464516 Query 146177 ATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTT 146236 |||||| ||| ||||| ||| ||||||| ||||| ||||| ||||| || | || || Sbjct 464517 ATTAGAAGATGGAAGAACTTTATCAGATTACAATATTCAAAAGGAATCTACATTACACTT 464576 Query 146237 AGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 ||| ||| |||||||||| ||| ||| |||| Sbjct 464577 AGTGTTAAGATTAAGAGGTGGTTTTTAATTATT 464609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786162744326240