Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq368 109 4e-19 >seq368 Length=2153551 Score = 109 bits (120), Expect = 4e-19 Identities = 141/191 (74%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||| || || | || ||||| |||||||| || ||||| | | || | ||| || Sbjct 464580 CACTAAGTGTAATGTAGATTCCTTTTGAATATTGTAATCTGATAAAGTTCTTCCATCTTC 464521 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 | |||||| |||||| |||| |||||||| || || || ||||| || ||||| ||||| Sbjct 464520 TAATTGTTTTCCAGCAAATATTAATCTTTGTTGGTCAGGTGGAATTCCTTCTTTATCTTG 464461 Query 29697 TAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTT 29755 |||||||| || ||| | || | |||||||| | || || ||||| |||||||||| Sbjct 464460 -AATTTTTGCCTTAACATTCTCAATGGTGTCAGATGGCTCGACGTCAAGGGTTATAGTTT 464402 Query 29756 TGCCAGTTAAG 29766 | || ||||| Sbjct 464401 TTCC--TTAAG 464393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385217453512452