Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq369 87.8 1e-12 seq368 84.2 1e-11 >seq369 Length=2804353 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| |||| ||| || ||||| || || ||||| || | || | | | || || Sbjct 2576897 ACCAAGTGTAAAGTAGATTCCTTTTGAATATTATAATCTGATAAGGTCCTTCCATCTTCT 2576956 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 ||||||||||| ||||| || || | || ||||| | || | |||||||| || | Sbjct 2576957 AATTGTTTTCCAGCAAATATTAATCTTTGTTGATCAGGAGGAATTCCTTCTTTATCTTGA 2577016 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| || | ||||| || | || || || || || |||| || || ||||| Sbjct 2577017 ATTTT-TGCCTTAACATTCTCAATCGTATCAGATGGCTCAACATCAAGGGTAATGGTTTT 2577075 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || ||||| ||||||||||| || ||||| Sbjct 2577076 TCCAGTTAATGTTTTTACAAAAATTTGCAT 2577105 >seq368 Length=2153551 Score = 84.2 bits (92), Expect = 1e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | |||||| || |||| || || ||||| || |||||||| || Sbjct 464598 ACCACCTCTTAATCTTAACACTAAGTGTAATGTAGATTCCTTTTGAATATTGTAATCTGA 464539 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | | || || ||||||||||| ||||| || || | || || || | || Sbjct 464538 TAAAGTTCTTCCATCTTCTAATTGTTTTCCAGCAAATATTAATCTTTGTTGGTCAGGTGG 464479 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || |||||| || | ||||| || | |||||| || || | Sbjct 464478 AATTCCTTCTTTATCTTGAATTTT-TGCCTTAACATTCTCAATGGTGTCAGATGGCTCGA 464420 Query 33701 CGTCAACCGTGATCGTTTTACCT 33723 |||||| || || ||||| ||| Sbjct 464419 CGTCAAGGGTTATAGTTTTTCCT 464397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702509738240