Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq368 95.1 3e-14 seq369 84.2 5e-11 >seq368 Length=2153551 Score = 95.1 bits (104), Expect = 3e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206196 AGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAA 206255 ||||||||| || || | || || || |||||||| | || || ||| ||| Sbjct 464397 AGGAAAAACTATAACCCTTGACGTCGAGCCATCTGACACCATTGAGAATGTTAAGGCAAA 464456 Query 206256 GATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCA 206315 |||||||| |||||||||||| || ||| |||||| | || || || ||||| || Sbjct 464457 AATTCAAGATAAAGAAGGAATTCCACCTGACCAACAAAGATTAATATTTGCTGGAAAACA 464516 Query 206316 GTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCT 206375 || ||||||||||| ||||| | |||||||| | || || || ||||| | ||| | Sbjct 464517 ATTAGAAGATGGAAGAACTTTATCAGATTACAATATTCAAAAGGAATCTACATTACACTT 464576 Query 206376 TGTTTTGAGA 206385 || || ||| Sbjct 464577 AGTGTTAAGA 464586 >seq369 Length=2804353 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || |||||||| || || | || || || ||||| || | || Sbjct 2577090 AAAACATTAACTGGAAAAACCATTACCCTTGATGTTGAGCCATCTGATACGATTGAGAAT 2577031 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||| |||||||| |||||||||||| || || |||||| | || || Sbjct 2577030 GTTAAGGCAAAAATTCAAGATAAAGAAGGAATTCCTCCTGATCAACAAAGATTAATATTT 2576971 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||| || || |||||||||||||| || | ||||| || | || || || ||| Sbjct 2576970 GCTGGAAAACAATTAGAAGATGGAAGGACCTTATCAGATTATAATATTCAAAAGGAATCT 2576911 Query 206365 ACTCTTCAC 206373 ||| | ||| Sbjct 2576910 ACTTTACAC 2576902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181815167146612