Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F000723685.1_202014-05-29] 372 sequences; 24,055,504 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq369 116 3e-21 seq368 116 3e-21 >seq369 Length=2804353 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| ||||| || ||||| | || |||||||| || || || || ||||| | Sbjct 2577108 AAAATGCAAATTTTTGTAAAAACATTAACTGGAAAAACCATTACCCTTGATGTTGAGCCA 2577049 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | || || |||| ||| |||| |||||| || || |||||||| | || || || Sbjct 2577048 TCTGATACGATTGAGAATGTTAAGGCAAAAA-TTCAAGATAAAGAAGGAATTCCTCCTGA 2576990 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||| | ||||||||||| || |||||| | ||||| | | | || ||| ||||| Sbjct 2576989 TCAACAAAGATTAATATTTGCTGGAAAACAATTAGAAGATGGAAGGACCTTATCAGATTA 2576930 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGT 23819 || || ||||| || || || ||||| || || Sbjct 2576929 TAATATTCAAAAGGAATCTACTTTACACTTGGT 2576897 >seq368 Length=2153551 Score = 116 bits (128), Expect = 3e-21 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23638 GGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAA 23696 |||||||| || || || || || || | | ||||| |||| ||| |||| ||||| Sbjct 464398 GGAAAAACTATAACCCTTGACGTCGAGCCATCTGACACCATTGAGAATGTTAAGGCAAAA 464457 Query 23697 AATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACA 23756 | || || |||||||| | || || || ||||| | ||||||||||| || ||||| Sbjct 464458 A-TTCAAGATAAAGAAGGAATTCCACCTGACCAACAAAGATTAATATTTGCTGGAAAACA 464516 Query 23757 ACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTT 23816 | | ||||| | | | |||||| |||||||| || ||||| || || |||||||| || Sbjct 464517 ATTAGAAGATGGAAGAACTTTATCAGATTACAATATTCAAAAGGAATCTACATTACACTT 464576 Query 23817 AGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || |||| || Sbjct 464577 AGTGTTAAGATTAAGAGGTGG 464597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008067548976