Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq5 156 6e-33 seq4 143 4e-29 >seq5 Length=2641308 Score = 156 bits (172), Expect = 6e-33 Identities = 190/262 (73%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 146068 TACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCAT 146126 |||||| ||||||||||||| |||| || |||||||||||||| | || || | ||| | Sbjct 2485482 TACCAAGTGTAAAGTAGATTCCTTTTGA-ATATTATAATCTGATAAGGTCCTTCCATCTT 2485540 Query 146127 CTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTT 146186 ||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||| Sbjct 2485541 CTAATTGTTTTCCAGCAAATATTAATCTTTGTTGATCAGGAGGAATTCCTTCTTTATCTT 2485600 Query 146187 GNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTTT 146246 | ||||| || || || || || || || |||| Sbjct 2485601 GAATTTTTGCCTTAACATTCTCAATCGTATCAGATGGCTCAACATCAAGGGTAATGGTTT 2485660 Query 146247 TACCTGTTAATGTTTTAATGAATATTTGCATTTTATTAGAAA-AAT-ATTTGTTaaaaaa 146304 | || ||||||||||| | || ||||||||||| ||| ||| ||| | | |||||| Sbjct 2485661 TTCCAGTTAATGTTTTTACAAAAATTTGCATTTTCTTAAAAATAATGAAAAGAAAAAAAA 2485720 Query 146305 aaTAATTACTATTCTTTATTTT 146326 || |||| ||||| | |||| Sbjct 2485721 AAAAATTTAGATTCTATCTTTT 2485742 >seq4 Length=1968205 Score = 143 bits (158), Expect = 4e-29 Identities = 116/138 (84%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | |||||| || || ||||| |||||||| ||| || || ||||||||||| Sbjct 458830 CCACCTCTTAATCTTAACACTAAGTGTAATGTAGATTCCTTTTGA-ATGTTATAATCTGA 458772 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | |||||| | ||| |||||||||||||| ||||| || |||||||| || || || || Sbjct 458771 TAAAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAATATTAATCTTTGTTGGTCAGGTGG 458712 Query 146170 AATTCCTTCTTTATCTTG 146187 |||||||||||||||||| Sbjct 458711 AATTCCTTCTTTATCTTG 458694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743519178499840