Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08]
777 sequences; 20,501,737 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq6 212 6e-50
>seq6
Length=3179732
Score = 212 bits (234), Expect = 6e-50
Identities = 591/889 (66%), Gaps = 51/889 (6%)
Strand=Plus/Plus
Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971
||||||||| || |||||||| ||||| ||||| ||||| |||| ||||| ||
Sbjct 149901 TTTTTGATAATCTGCGACTCTTTTCTCAAAAAAGTTTGTTTTTCCTTGAAGTGAAATTAA 149960
Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAG---TTCTAA 14028
||||| ||| |||||||||| | || || | |||| || |||| ||||||
Sbjct 149961 GTCCATCCAATTAAATGGATTTTTGGAATGGAAAATTTTAGAGCATCCTAAACATTCTAA 150020
Query 14029 TAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATC-ACAATTCATACCTA 14087
|| ||||||| |||| || || |||||||||||||| || || | ||||||| ||||
Sbjct 150021 TA---ATCTATCAGCAACAAATTCTATATATTGAGACAT-AAGTCTAGAATTCATTCCTA 150076
Query 14088 TTAGTTTTACA------GGAATTATATTGGTTAAAAATTCTTT----TTCTATAGACACA 14137
||| | ||| ||| | | || ||||| ||||| ||||| ||
Sbjct 150077 TTAAATC-ACATGGTAAGGATTCACATA---TAAAAGATCTTTCAACTTCTA------CA 150126
Query 14138 GCCTCGTTTATAATAATCGTAATAATTTCAT-TAGAAGGAGGATATTTTAGATGTTTAAA 14196
|| || || | ||| | | |||| | | |||| ||| | | | | | |
Sbjct 150127 GCTTCTTTAACGATATTTTGTACCATTTGTTCTGGAAGTTTATTATCTAATAAACT-ATA 150185
Query 14197 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 14256
|||||| || |||||| ||| | || ||||||||||| || | ||| || |||
Sbjct 150186 AATTAAGCAATTAAAATCTGTATGTAATCCTTCATCTCTACTGATTAATTCATTACTAAA 150245
Query 14257 TGTTAATCC-TGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGG 14315
||| || || || || || | |||| || |||||||| |||||| || ||
Sbjct 150246 TGTCAAACCGTGTAATTTATTTT-GTTTCTTAAACCAAAAAATTGCACAAAAACTACCAC 150304
Query 14316 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT 14375
|| |||||||| ||||| ||| || | | || ||| ||||||| ||
Sbjct 150305 TGAATAATATTCCTTCAACACATGCATTAGCAACAATTCTTTCAGCAAACGAA-----TT 150359
Query 14376 TGTTCGAT--ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTC 14433
|| || ||||||||| |||||| | ||| ||||| | | || ||||
Sbjct 150360 AGTATCATTAATCCATTTTGCTGCCCATAATGCTTTATTTTTTACGGCAGGGATATTTTC 150419
Query 14434 AATAGCATTAAATAAATGT--TCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGT 14491
||||||| |||||||| | || |||| ||| | || ||| || ||||||| | |
Sbjct 150420 TATAGCATGAAATAAATTTAATCTTTCTTTTTCATCTTT--AATATAATTATCAATTAAT 150477
Query 14492 AAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTA 14551
|| ||||| |||| || || || ||||| | |||||| ||||| |||||| | ||
Sbjct 150478 AAACTATATGTTTCTGAATGAATATTTTCTACAGCTATTTGAAAGGAATAAAATTTTTTA 150537
Query 14552 GCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCG-GCCAAATTTTCATTAACTATACC 14610
||||| | ||| |||||| ||||| ||| | ||||||||||| ||||||||
Sbjct 150538 GCTTCCGTTATTTGAACCTCTCT-TAAAAACTTACTAGCCAAATTTTCTAATACTATACC 150596
Query 14611 ATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC---TTCATTGCT 14667
|||||| |||||||||||||| || | | || ||||| | || ||| ||||| |
Sbjct 150597 ATCACTTGCTGCAAAAAATGCTAACACATGCTTTATAAAATGTTTCTCATTTTCAT---T 150653
Query 14668 GAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACT 14727
| ||| | |||| |||||| |||| | ||| | ||| || |||||||||||
Sbjct 150654 CAATTTCTCAAAATCTTTTAAATCACTAGATAAATCAATTTCTTCTGCTGTCCAAAAAGA 150713
Query 14728 AGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGA 14776
||| ||||||| || || | |||| | || ||||||||| |||
Sbjct 150714 AGCTTCAGCTTTCTTGTAAAAATCCCAAACATCAGGATATAATATTGGA 150762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482340915218360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |