Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 9e-12 >seq9 Length=827030 Score = 86.0 bits (94), Expect = 9e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 70194 ATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGG 70253 |||| ||| ||| || || | |||| |||||||| |||| | ||||||||| Sbjct 500742 ATCCTACAAGTAGAAGAATTCTTTTGTGTGCATGGAATGTAAAAGATCTTGACCAAATGG 500801 Query 70254 CACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATGCT 70313 || |||| || ||||| ||| ||||||||| | |||||| ||||| ||||| Sbjct 500802 CATTACCTCCTTGTCATATTTTATGTCAGTTTTATGTTTTCGATGGGAAATTATCATGTA 500861 Query 70314 TAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATT 70373 | |||||||| || || | || || || ||||| ||||| ||||| |||| Sbjct 500862 TTATGTATCAAAGATCATGTGATTTAGGGCTAGGAGTACCTTTTAATATTGCTTCTTATT 500921 Query 70374 CTATGTTGACGCACATGATTGCTCA 70398 |||| || || || |||||||| || Sbjct 500922 CTATTTTTACTCATATGATTGCACA 500946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741052002462520