Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 104 4e-18 >seq3 Length=1843035 Score = 104 bits (114), Expect = 4e-18 Identities = 168/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| || || || ||||| ||| | ||| | || | | ||||| | Sbjct 117731 GAGATAACATTCAAGGTATTACAAAACCAGCCATCAGACGTTTAGCAAGAAGAGGTGGTG 117672 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | || ||| | ||||| || | |||||||| || | | ||||| || | ||| | Sbjct 117671 TTAAACGTATTTCTGGTTTAATATATGAAGAAATCAGAGGAGTTTTAAAAGTTTTCTTAG 117612 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | ||| || | ||| | || ||||| || ||||||||| | || || ||||| Sbjct 117611 AAAACGTAATTAAAGATTCCATCATGTATACTGAACACGCTAAAAGAAAAACCGTCACTG 117552 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||||| || || | || ||| | ||||| | | | |||||||||||| ||| Sbjct 117551 CTATGGATATTGTATACTCCTTAAAAAGACAAGGAAGAACTTTATATGGTTTTGGAGGTT 117492 Query 16698 AA 16699 || Sbjct 117491 AA 117490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074489583461